RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 REC8O95072 547 aa22.67■■□□□ 1.22
ECHDC1-214ENST00000474289 TMX3Q96JJ7 454 aa22.67■■□□□ 1.22
ECHDC1-214ENST00000474289 FYB1O15117 783 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 FCHSD2O94868 740 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 SYAP1Q96A49 352 aaPredicted RBP22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 PNPLA6Q8IY17 1366 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 FAM177BA6PVY3 158 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 PRKAR2BP31323 418 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 ATP2B3Q16720 1220 aa22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 GTPBP4Q9BZE4 634 aaKnown RBP22.66■■□□□ 1.22
ECHDC1-214ENST00000474289 PPP4R3BQ5MIZ7 849 aa22.65■■□□□ 1.22
ECHDC1-214ENST00000474289 C17orf53Q8N3J3 647 aaPredicted RBP22.65■■□□□ 1.22
ECHDC1-214ENST00000474289 ANKRD26Q9UPS8 1709 aa22.65■■□□□ 1.22
ECHDC1-214ENST00000474289 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
ECHDC1-214ENST00000474289 KIF3AQ9Y496 699 aa22.65■■□□□ 1.22
ECHDC1-214ENST00000474289 TTC12Q9H892 705 aaPredicted RBP22.64■■□□□ 1.21
ECHDC1-214ENST00000474289 USP25Q9UHP3 1055 aa22.64■■□□□ 1.21
ECHDC1-214ENST00000474289 FRMPD1Q5SYB0 1578 aa22.64■■□□□ 1.21
ECHDC1-214ENST00000474289 YEATS2Q9ULM3 1422 aa22.63■■□□□ 1.21
ECHDC1-214ENST00000474289 NEK4P51957 841 aa22.63■■□□□ 1.21
ECHDC1-214ENST00000474289 API5Q9BZZ5 524 aaKnown RBP22.63■■□□□ 1.21
ECHDC1-214ENST00000474289 ERC2O15083 957 aa22.62■■□□□ 1.21
ECHDC1-214ENST00000474289 FKBP5Q13451 457 aaPredicted RBP22.62■■□□□ 1.21
ECHDC1-214ENST00000474289 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
ECHDC1-214ENST00000474289 PHF14O94880 888 aa22.62■■□□□ 1.21
ECHDC1-214ENST00000474289 MBIPQ9NS73 344 aa22.62■■□□□ 1.21
ECHDC1-214ENST00000474289 TWISTNBQ3B726 338 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 CDC42BPGQ6DT37 1551 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 FAM184AQ8NB25 1140 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 SPTLC3Q9NUV7 552 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 ATP10DQ9P241 1426 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 SMARCA5O60264 1052 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 GADD45BO75293 160 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 KIF20AO95235 890 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 UVSSAQ2YD98 709 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 BCL2L12Q9HB09 334 aa22.61■■□□□ 1.21
ECHDC1-214ENST00000474289 GNAI1P63096 354 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 PHACTR3Q96KR7 559 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 GDPD2Q9HCC8 539 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 IFT57Q9NWB7 429 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 HECW2Q9P2P5 1572 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 NFE2L2Q16236 605 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
ECHDC1-214ENST00000474289 ABCC3O15438 1527 aa22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 APBB1O00213 710 aa22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 CUL4AQ13619 759 aa22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 MINK1Q8N4C8 1332 aaPredicted RBP22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 ADCY5O95622 1261 aa22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
ECHDC1-214ENST00000474289 FBLN1P23142 703 aa22.58■■□□□ 1.21
ECHDC1-214ENST00000474289 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
ECHDC1-214ENST00000474289 ZNF853P0CG23 659 aa22.58■■□□□ 1.2
ECHDC1-214ENST00000474289 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
ECHDC1-214ENST00000474289 LETM1O95202 739 aaPredicted RBP22.57■■□□□ 1.2
ECHDC1-214ENST00000474289 MCM2P49736 904 aa22.57■■□□□ 1.2
ECHDC1-214ENST00000474289 TCHHQ07283 1943 aa22.56■■□□□ 1.2
ECHDC1-214ENST00000474289 CEP85Q6P2H3 762 aa22.56■■□□□ 1.2
ECHDC1-214ENST00000474289 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
ECHDC1-214ENST00000474289 TERF2IPQ9NYB0 399 aa22.56■■□□□ 1.2
ECHDC1-214ENST00000474289 SPDYE4A6NLX3 237 aa22.55■■□□□ 1.2
ECHDC1-214ENST00000474289 HMOX1P09601 288 aa22.55■■□□□ 1.2
ECHDC1-214ENST00000474289 PDCL2Q8N4E4 241 aa22.55■■□□□ 1.2
ECHDC1-214ENST00000474289 NOL8Q76FK4 1167 aaKnown RBP22.55■■□□□ 1.2
ECHDC1-214ENST00000474289 INTS4Q96HW7 963 aaKnown RBP22.55■■□□□ 1.2
ECHDC1-214ENST00000474289 PIK3C2BO00750 1634 aa22.54■■□□□ 1.2
ECHDC1-214ENST00000474289 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
ECHDC1-214ENST00000474289 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
ECHDC1-214ENST00000474289 HCLS1P14317 486 aaPredicted RBP22.53■■□□□ 1.2
ECHDC1-214ENST00000474289 PRAM1Q96QH2 718 aa22.53■■□□□ 1.2
ECHDC1-214ENST00000474289 FGD1P98174 961 aa22.53■■□□□ 1.2
ECHDC1-214ENST00000474289 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
ECHDC1-214ENST00000474289 POGZQ7Z3K3 1410 aa22.52■■□□□ 1.2
ECHDC1-214ENST00000474289 IDI1Q13907 227 aa22.52■■□□□ 1.2
ECHDC1-214ENST00000474289 PALD1Q9ULE6 856 aa22.52■■□□□ 1.2
ECHDC1-214ENST00000474289 CCDC183Q5T5S1 534 aa22.51■■□□□ 1.19
ECHDC1-214ENST00000474289 PTPRMP28827 1452 aa22.51■■□□□ 1.19
ECHDC1-214ENST00000474289 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
ECHDC1-214ENST00000474289 RIOK3O14730 519 aaKnown RBP22.5■■□□□ 1.19
ECHDC1-214ENST00000474289 U2AF2P26368 475 aaKnown RBP eCLIP22.5■■□□□ 1.198e-7■■■■□ 25.7
ECHDC1-214ENST00000474289 ANKRD7Q92527 254 aa22.5■■□□□ 1.19
ECHDC1-214ENST00000474289 KIAA1524Q8TCG1 905 aa22.49■■□□□ 1.19
ECHDC1-214ENST00000474289 MLH3Q9UHC1 1453 aa22.49■■□□□ 1.19
ECHDC1-214ENST00000474289 KDM4AO75164 1064 aa22.49■■□□□ 1.19
ECHDC1-214ENST00000474289 RGS12O14924 1447 aa22.49■■□□□ 1.19
ECHDC1-214ENST00000474289 MSH6P52701 1360 aa22.49■■□□□ 1.19
ECHDC1-214ENST00000474289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.195e-7■■■□□ 18.9
ECHDC1-214ENST00000474289 DIAPH3Q9NSV4 1193 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 CABP1Q9NZU7 370 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 WDR33Q9C0J8 1336 aaKnown RBP22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 PDE1AP54750 535 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 TMEM87AQ8NBN3 555 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 KCNF1Q9H3M0 494 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 OSBPL3Q9H4L5 887 aa22.48■■□□□ 1.19
ECHDC1-214ENST00000474289 MX1P20591 662 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms