RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 RSPH6AQ9H0K4 717 aa18.04■□□□□ 0.48
LDLRAP1-204ENST00000474283 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
LDLRAP1-204ENST00000474283 FCHSD2O94868 740 aa18.03■□□□□ 0.48
LDLRAP1-204ENST00000474283 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
LDLRAP1-204ENST00000474283 MEGF6O75095 1541 aa18.03■□□□□ 0.48
LDLRAP1-204ENST00000474283 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.48
LDLRAP1-204ENST00000474283 NEFLP07196 543 aa18.02■□□□□ 0.48
LDLRAP1-204ENST00000474283 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
LDLRAP1-204ENST00000474283 LRRC37A3O60309 1634 aa18.01■□□□□ 0.47
LDLRAP1-204ENST00000474283 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
LDLRAP1-204ENST00000474283 IL2RBP14784 551 aa18.01■□□□□ 0.47
LDLRAP1-204ENST00000474283 GJD4Q96KN9 370 aaPredicted RBP18.01■□□□□ 0.47
LDLRAP1-204ENST00000474283 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
LDLRAP1-204ENST00000474283 A0A0G2JS52 829 aa18■□□□□ 0.47
LDLRAP1-204ENST00000474283 MYT1Q01538 1121 aa18■□□□□ 0.47
LDLRAP1-204ENST00000474283 FAM98CQ17RN3 349 aaKnown RBP18■□□□□ 0.47
LDLRAP1-204ENST00000474283 RUNDC1Q96C34 613 aa18■□□□□ 0.47
LDLRAP1-204ENST00000474283 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
LDLRAP1-204ENST00000474283 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
LDLRAP1-204ENST00000474283 THSD7AQ9UPZ6 1657 aa17.99■□□□□ 0.47
LDLRAP1-204ENST00000474283 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
LDLRAP1-204ENST00000474283 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
LDLRAP1-204ENST00000474283 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
LDLRAP1-204ENST00000474283 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
LDLRAP1-204ENST00000474283 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
LDLRAP1-204ENST00000474283 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
LDLRAP1-204ENST00000474283 PLEKHO1Q53GL0 409 aaPredicted RBP17.96■□□□□ 0.47
LDLRAP1-204ENST00000474283 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
LDLRAP1-204ENST00000474283 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
LDLRAP1-204ENST00000474283 CDCA7Q9BWT1 371 aaPredicted RBP17.95■□□□□ 0.46
LDLRAP1-204ENST00000474283 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
LDLRAP1-204ENST00000474283 APAF1O14727 1248 aa17.94■□□□□ 0.46
LDLRAP1-204ENST00000474283 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
LDLRAP1-204ENST00000474283 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
LDLRAP1-204ENST00000474283 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
LDLRAP1-204ENST00000474283 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
LDLRAP1-204ENST00000474283 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
LDLRAP1-204ENST00000474283 RXRBP28702 533 aa17.93■□□□□ 0.46
LDLRAP1-204ENST00000474283 MTHFSDQ2M296 383 aaKnown RBP17.93■□□□□ 0.46
LDLRAP1-204ENST00000474283 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
LDLRAP1-204ENST00000474283 EXOC5O00471 708 aa17.92■□□□□ 0.46
LDLRAP1-204ENST00000474283 DDB1Q16531 1140 aa17.92■□□□□ 0.46
LDLRAP1-204ENST00000474283 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
LDLRAP1-204ENST00000474283 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
LDLRAP1-204ENST00000474283 ITGB4P16144 1822 aa17.92■□□□□ 0.46
LDLRAP1-204ENST00000474283 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 NFE2L2Q16236 605 aa17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
LDLRAP1-204ENST00000474283 SEPT12Q8IYM1 358 aa17.9■□□□□ 0.46
LDLRAP1-204ENST00000474283 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
LDLRAP1-204ENST00000474283 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
LDLRAP1-204ENST00000474283 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
LDLRAP1-204ENST00000474283 RIPK4P57078 832 aa17.89■□□□□ 0.45
LDLRAP1-204ENST00000474283 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
LDLRAP1-204ENST00000474283 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
LDLRAP1-204ENST00000474283 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
LDLRAP1-204ENST00000474283 MAP3K5Q99683 1374 aa17.88■□□□□ 0.45
LDLRAP1-204ENST00000474283 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
LDLRAP1-204ENST00000474283 CYP27B1O15528 508 aa17.87■□□□□ 0.45
LDLRAP1-204ENST00000474283 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
LDLRAP1-204ENST00000474283 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
LDLRAP1-204ENST00000474283 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 PHKG2P15735 406 aa17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 CCDC27Q2M243 656 aa17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 ADAMTS7Q9UKP4 1686 aa17.86■□□□□ 0.45
LDLRAP1-204ENST00000474283 RGS12O14924 1447 aa17.85■□□□□ 0.45
LDLRAP1-204ENST00000474283 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
LDLRAP1-204ENST00000474283 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
LDLRAP1-204ENST00000474283 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
LDLRAP1-204ENST00000474283 E9PSI1 815 aa17.83■□□□□ 0.44
LDLRAP1-204ENST00000474283 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
LDLRAP1-204ENST00000474283 DCTN1Q14203 1278 aa17.83■□□□□ 0.44
LDLRAP1-204ENST00000474283 MCM10Q7L590 875 aa17.83■□□□□ 0.44
LDLRAP1-204ENST00000474283 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
LDLRAP1-204ENST00000474283 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
LDLRAP1-204ENST00000474283 ERICH6BQ5W0A0 696 aa17.82■□□□□ 0.44
LDLRAP1-204ENST00000474283 WDR63Q8IWG1 891 aa17.82■□□□□ 0.44
LDLRAP1-204ENST00000474283 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
LDLRAP1-204ENST00000474283 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
LDLRAP1-204ENST00000474283 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
LDLRAP1-204ENST00000474283 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
LDLRAP1-204ENST00000474283 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
LDLRAP1-204ENST00000474283 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
LDLRAP1-204ENST00000474283 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
LDLRAP1-204ENST00000474283 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
LDLRAP1-204ENST00000474283 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
LDLRAP1-204ENST00000474283 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
LDLRAP1-204ENST00000474283 BTAF1O14981 1849 aa17.79■□□□□ 0.44
LDLRAP1-204ENST00000474283 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
LDLRAP1-204ENST00000474283 WWC1Q8IX03 1113 aa17.79■□□□□ 0.44
LDLRAP1-204ENST00000474283 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
LDLRAP1-204ENST00000474283 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
LDLRAP1-204ENST00000474283 KDM3BQ7LBC6 1761 aa17.78■□□□□ 0.44
LDLRAP1-204ENST00000474283 ZNF521Q96K83 1311 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms