RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 IGSF1Q8N6C5 1336 aa26.75■■□□□ 1.87
RNF220-209ENST00000474064 MRPL50Q8N5N7 158 aaKnown RBP26.75■■□□□ 1.87
RNF220-209ENST00000474064 DDX19BQ9UMR2 479 aa26.75■■□□□ 1.87
RNF220-209ENST00000474064 LMOD2Q6P5Q4 547 aa26.74■■□□□ 1.87
RNF220-209ENST00000474064 ZNF428Q96B54 188 aa26.74■■□□□ 1.87
RNF220-209ENST00000474064 MARF1Q9Y4F3 1742 aaKnown RBP26.74■■□□□ 1.87
RNF220-209ENST00000474064 MIS18AQ9NYP9 233 aa26.74■■□□□ 1.87
RNF220-209ENST00000474064 FAM161AQ3B820 660 aa26.73■■□□□ 1.87
RNF220-209ENST00000474064 C8orf34Q49A92 452 aa26.73■■□□□ 1.87
RNF220-209ENST00000474064 RWDD1Q9H446 243 aaPredicted RBP26.73■■□□□ 1.87
RNF220-209ENST00000474064 USHBP1Q8N6Y0 703 aa26.72■■□□□ 1.87
RNF220-209ENST00000474064 RTF1Q92541 710 aaKnown RBP26.71■■□□□ 1.87
RNF220-209ENST00000474064 KDRP35968 1356 aa26.7■■□□□ 1.87
RNF220-209ENST00000474064 CHL1O00533 1208 aa26.69■■□□□ 1.86
RNF220-209ENST00000474064 BRPF1P55201 1214 aaPredicted RBP26.68■■□□□ 1.86
RNF220-209ENST00000474064 HSPA2P54652 639 aa26.67■■□□□ 1.86
RNF220-209ENST00000474064 PDZRN3Q9UPQ7 1066 aa26.67■■□□□ 1.86
RNF220-209ENST00000474064 GAS2L2Q8NHY3 880 aa26.66■■□□□ 1.86
RNF220-209ENST00000474064 ZBTB40Q9NUA8 1239 aa26.66■■□□□ 1.86
RNF220-209ENST00000474064 KIF24Q5T7B8 1368 aa26.65■■□□□ 1.86
RNF220-209ENST00000474064 CRB1P82279 1406 aa26.64■■□□□ 1.86
RNF220-209ENST00000474064 IP6K1Q92551 441 aa26.64■■□□□ 1.85
RNF220-209ENST00000474064 C19orf44Q9H6X5 657 aa26.64■■□□□ 1.85
RNF220-209ENST00000474064 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
RNF220-209ENST00000474064 TSPYL4Q9UJ04 414 aa26.63■■□□□ 1.85
RNF220-209ENST00000474064 USP54Q70EL1 1684 aa26.62■■□□□ 1.85
RNF220-209ENST00000474064 KCNH5Q8NCM2 988 aa26.62■■□□□ 1.85
RNF220-209ENST00000474064 ARHGAP45Q92619 1136 aa26.62■■□□□ 1.85
RNF220-209ENST00000474064 KRT28Q7Z3Y7 464 aa26.61■■□□□ 1.85
RNF220-209ENST00000474064 GCP02774 474 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 LTN1O94822 1766 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 NBPF6Q5VWK0 638 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 NBPF4Q96M43 638 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 C1orf115Q9H7X2 142 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 NFAT5O94916 1531 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 RTL1A6NKG5 1358 aa26.6■■□□□ 1.85
RNF220-209ENST00000474064 GNAT3A8MTJ3 354 aa26.59■■□□□ 1.85
RNF220-209ENST00000474064 RRAGDQ9NQL2 400 aaPredicted RBP26.59■■□□□ 1.85
RNF220-209ENST00000474064 DDX17Q92841 729 aaKnown RBP26.59■■□□□ 1.85
RNF220-209ENST00000474064 LRRC59Q96AG4 307 aaKnown RBP26.59■■□□□ 1.85
RNF220-209ENST00000474064 C1orf167Q5SNV9 1468 aa26.58■■□□□ 1.85
RNF220-209ENST00000474064 TMEM94Q12767 1356 aa26.58■■□□□ 1.85
RNF220-209ENST00000474064 ATF3P18847 181 aa26.58■■□□□ 1.85
RNF220-209ENST00000474064 HDAC1Q13547 482 aaPredicted RBP26.58■■□□□ 1.84
RNF220-209ENST00000474064 ZBTB7BO15156 539 aaPredicted RBP26.57■■□□□ 1.84
RNF220-209ENST00000474064 ABCC4O15439 1325 aa26.56■■□□□ 1.84
RNF220-209ENST00000474064 API5Q9BZZ5 524 aaKnown RBP26.56■■□□□ 1.84
RNF220-209ENST00000474064 PKNOX2Q96KN3 472 aa26.56■■□□□ 1.84
RNF220-209ENST00000474064 KIAA0232Q92628 1395 aa26.55■■□□□ 1.84
RNF220-209ENST00000474064 IL17REQ8NFR9 667 aa26.54■■□□□ 1.84
RNF220-209ENST00000474064 HAP1P54257 671 aaPredicted RBP26.53■■□□□ 1.84
RNF220-209ENST00000474064 MAP3K5Q99683 1374 aa26.52■■□□□ 1.84
RNF220-209ENST00000474064 SLC4A2P04920 1241 aa26.52■■□□□ 1.84
RNF220-209ENST00000474064 ARHGEF25Q86VW2 580 aa26.52■■□□□ 1.84
RNF220-209ENST00000474064 HTATSF1O43719 755 aaKnown RBP26.51■■□□□ 1.83
RNF220-209ENST00000474064 MSH6P52701 1360 aa26.51■■□□□ 1.83
RNF220-209ENST00000474064 ZC3H6P61129 1189 aaKnown RBP26.49■■□□□ 1.83
RNF220-209ENST00000474064 NECTIN2Q92692 538 aa26.49■■□□□ 1.83
RNF220-209ENST00000474064 AXIN2Q9Y2T1 843 aa26.48■■□□□ 1.83
RNF220-209ENST00000474064 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
RNF220-209ENST00000474064 SMC5Q8IY18 1101 aa26.47■■□□□ 1.83
RNF220-209ENST00000474064 ANKRD24Q8TF21 1146 aa26.47■■□□□ 1.83
RNF220-209ENST00000474064 CHMP4BQ9H444 224 aaKnown RBP26.47■■□□□ 1.83
RNF220-209ENST00000474064 MST1RQ04912 1400 aa26.46■■□□□ 1.83
RNF220-209ENST00000474064 SEC24BO95487 1268 aa26.45■■□□□ 1.83
RNF220-209ENST00000474064 G2E3Q7L622 706 aa26.45■■□□□ 1.83
RNF220-209ENST00000474064 USP19O94966 1318 aa26.45■■□□□ 1.82
RNF220-209ENST00000474064 GLIPR1L2Q4G1C9 344 aa26.45■■□□□ 1.82
RNF220-209ENST00000474064 SLKQ9H2G2 1235 aaPredicted RBP26.45■■□□□ 1.82
RNF220-209ENST00000474064 TAF7Q15545 349 aaPredicted RBP26.45■■□□□ 1.82
RNF220-209ENST00000474064 LGR6Q9HBX8 967 aa26.44■■□□□ 1.82
RNF220-209ENST00000474064 RGPD2P0DJD1 1756 aa26.44■■□□□ 1.82
RNF220-209ENST00000474064 TRPM3Q9HCF6 1732 aaPredicted RBP26.44■■□□□ 1.82
RNF220-209ENST00000474064 SLIT3O75094 1523 aa26.43■■□□□ 1.82
RNF220-209ENST00000474064 L1TD1Q5T7N2 865 aaKnown RBP26.43■■□□□ 1.82
RNF220-209ENST00000474064 LNPKQ9C0E8 428 aa26.43■■□□□ 1.82
RNF220-209ENST00000474064 RGS12O14924 1447 aa26.43■■□□□ 1.82
RNF220-209ENST00000474064 SIRT2Q8IXJ6 389 aa26.43■■□□□ 1.82
RNF220-209ENST00000474064 ARXQ96QS3 562 aa26.43■■□□□ 1.82
RNF220-209ENST00000474064 ZNF530Q6P9A1 599 aaPredicted RBP26.42■■□□□ 1.82
RNF220-209ENST00000474064 CABLES1Q8TDN4 633 aa26.42■■□□□ 1.82
RNF220-209ENST00000474064 INTS3Q68E01 1043 aaKnown RBP26.42■■□□□ 1.82
RNF220-209ENST00000474064 KIF1AQ12756 1690 aa26.42■■□□□ 1.82
RNF220-209ENST00000474064 F6X3S4 739 aa26.41■■□□□ 1.82
RNF220-209ENST00000474064 SLC4A10Q6U841 1118 aa26.41■■□□□ 1.82
RNF220-209ENST00000474064 CADPS2Q86UW7 1296 aa26.41■■□□□ 1.82
RNF220-209ENST00000474064 PTPRCP08575 1304 aa26.41■■□□□ 1.82
RNF220-209ENST00000474064 STK31Q9BXU1 1019 aa26.4■■□□□ 1.82
RNF220-209ENST00000474064 NUCB1Q02818 461 aa26.39■■□□□ 1.82
RNF220-209ENST00000474064 MPRIPQ6WCQ1 1025 aa26.39■■□□□ 1.82
RNF220-209ENST00000474064 ANKRD45Q5TZF3 282 aa26.39■■□□□ 1.81
RNF220-209ENST00000474064 LRRC37A3O60309 1634 aa26.39■■□□□ 1.81
RNF220-209ENST00000474064 KDM4FA0A1W2PPD8 638 aa26.38■■□□□ 1.81
RNF220-209ENST00000474064 PLEKHO1Q53GL0 409 aaPredicted RBP26.38■■□□□ 1.81
RNF220-209ENST00000474064 NAP1L5Q96NT1 182 aaPredicted RBP26.38■■□□□ 1.81
RNF220-209ENST00000474064 CHD1LQ86WJ1 897 aa26.37■■□□□ 1.81
RNF220-209ENST00000474064 VSIG10Q8N0Z9 540 aa26.37■■□□□ 1.81
RNF220-209ENST00000474064 CCDC30Q5VVM6 783 aa26.36■■□□□ 1.81
RNF220-209ENST00000474064 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
RNF220-209ENST00000474064 BECN1Q14457 450 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms