RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SMG6Q86US8 1419 aaKnown RBP18.76■□□□□ 0.59
COPS7B-219ENST00000474042 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
COPS7B-219ENST00000474042 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
COPS7B-219ENST00000474042 MAP3K5Q99683 1374 aa18.76■□□□□ 0.59
COPS7B-219ENST00000474042 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
COPS7B-219ENST00000474042 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
COPS7B-219ENST00000474042 AKT1S1Q96B36 256 aa18.75■□□□□ 0.59
COPS7B-219ENST00000474042 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
COPS7B-219ENST00000474042 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
COPS7B-219ENST00000474042 INSRP06213 1382 aa18.74■□□□□ 0.59
COPS7B-219ENST00000474042 ZCRB1Q8TBF4 217 aaKnown RBP18.74■□□□□ 0.59
COPS7B-219ENST00000474042 FHDC1Q9C0D6 1143 aaPredicted RBP18.74■□□□□ 0.59
COPS7B-219ENST00000474042 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
COPS7B-219ENST00000474042 FLT4P35916 1363 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
COPS7B-219ENST00000474042 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
COPS7B-219ENST00000474042 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
COPS7B-219ENST00000474042 C5P01031 1676 aa18.72■□□□□ 0.59
COPS7B-219ENST00000474042 CHD4Q14839 1912 aa18.72■□□□□ 0.59
COPS7B-219ENST00000474042 NSD3Q9BZ95 1437 aa18.71■□□□□ 0.59
COPS7B-219ENST00000474042 PNPLA7Q6ZV29 1317 aa18.71■□□□□ 0.59
COPS7B-219ENST00000474042 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
COPS7B-219ENST00000474042 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
COPS7B-219ENST00000474042 ARXQ96QS3 562 aa18.7■□□□□ 0.58
COPS7B-219ENST00000474042 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
COPS7B-219ENST00000474042 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
COPS7B-219ENST00000474042 CARD14Q9BXL6 1004 aa18.69■□□□□ 0.58
COPS7B-219ENST00000474042 ITGB4P16144 1822 aa18.69■□□□□ 0.58
COPS7B-219ENST00000474042 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
COPS7B-219ENST00000474042 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
COPS7B-219ENST00000474042 KCNQ4P56696 695 aa18.67■□□□□ 0.58
COPS7B-219ENST00000474042 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
COPS7B-219ENST00000474042 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
COPS7B-219ENST00000474042 MAP2P11137 1827 aaKnown RBP18.66■□□□□ 0.58
COPS7B-219ENST00000474042 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
COPS7B-219ENST00000474042 TIMELESSQ9UNS1 1208 aa18.66■□□□□ 0.58
COPS7B-219ENST00000474042 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
COPS7B-219ENST00000474042 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
COPS7B-219ENST00000474042 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
COPS7B-219ENST00000474042 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
COPS7B-219ENST00000474042 UTRNP46939 3433 aa18.63■□□□□ 0.57
COPS7B-219ENST00000474042 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
COPS7B-219ENST00000474042 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
COPS7B-219ENST00000474042 CYP27B1O15528 508 aa18.61■□□□□ 0.57
COPS7B-219ENST00000474042 POLD1P28340 1107 aa18.61■□□□□ 0.57
COPS7B-219ENST00000474042 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
COPS7B-219ENST00000474042 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
COPS7B-219ENST00000474042 ZNF784Q8NCA9 323 aaPredicted RBP18.58■□□□□ 0.56
COPS7B-219ENST00000474042 COL23A1Q86Y22 540 aaPredicted RBP18.57■□□□□ 0.56
COPS7B-219ENST00000474042 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
COPS7B-219ENST00000474042 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
COPS7B-219ENST00000474042 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
COPS7B-219ENST00000474042 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
COPS7B-219ENST00000474042 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
COPS7B-219ENST00000474042 NLGN2Q8NFZ4 835 aa18.54■□□□□ 0.56
COPS7B-219ENST00000474042 EYA1Q99502 592 aa18.54■□□□□ 0.56
COPS7B-219ENST00000474042 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
COPS7B-219ENST00000474042 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
COPS7B-219ENST00000474042 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
COPS7B-219ENST00000474042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.568e-10■■■□□ 14.8
COPS7B-219ENST00000474042 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
COPS7B-219ENST00000474042 GPR162Q16538 588 aa18.52■□□□□ 0.56
COPS7B-219ENST00000474042 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
COPS7B-219ENST00000474042 MSH5O43196 834 aa18.51■□□□□ 0.55
COPS7B-219ENST00000474042 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
COPS7B-219ENST00000474042 FLAD1Q8NFF5 587 aa18.51■□□□□ 0.55
COPS7B-219ENST00000474042 PIGBQ92521 554 aa18.51■□□□□ 0.55
COPS7B-219ENST00000474042 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
COPS7B-219ENST00000474042 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
COPS7B-219ENST00000474042 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
COPS7B-219ENST00000474042 GOLGB1Q14789 3259 aaKnown RBP18.48■□□□□ 0.55
COPS7B-219ENST00000474042 PHKG2P15735 406 aa18.48■□□□□ 0.55
COPS7B-219ENST00000474042 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
COPS7B-219ENST00000474042 KDRP35968 1356 aa18.47■□□□□ 0.55
COPS7B-219ENST00000474042 COL5A3P25940 1745 aaPredicted RBP18.47■□□□□ 0.55
COPS7B-219ENST00000474042 HSPA5P11021 654 aaKnown RBP18.47■□□□□ 0.55
COPS7B-219ENST00000474042 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
COPS7B-219ENST00000474042 AK7Q96M32 723 aa18.47■□□□□ 0.55
COPS7B-219ENST00000474042 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
COPS7B-219ENST00000474042 LOC102724428A0A0B4J2F2 783 aa18.46■□□□□ 0.55
COPS7B-219ENST00000474042 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
COPS7B-219ENST00000474042 SIK1P57059 783 aa18.46■□□□□ 0.55
COPS7B-219ENST00000474042 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
COPS7B-219ENST00000474042 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
COPS7B-219ENST00000474042 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
COPS7B-219ENST00000474042 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
COPS7B-219ENST00000474042 CD2APQ9Y5K6 639 aa18.45■□□□□ 0.54
COPS7B-219ENST00000474042 SSFA2P28290 1259 aa18.44■□□□□ 0.54
COPS7B-219ENST00000474042 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
COPS7B-219ENST00000474042 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
COPS7B-219ENST00000474042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.43■□□□□ 0.54
COPS7B-219ENST00000474042 ITPK1Q13572 414 aa18.43■□□□□ 0.54
COPS7B-219ENST00000474042 PANK3Q9H999 370 aa18.43■□□□□ 0.54
COPS7B-219ENST00000474042 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
COPS7B-219ENST00000474042 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
COPS7B-219ENST00000474042 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms