RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CREBZFQ9NS37 354 aa7.42□□□□□ -1.22
SNRNP40-204ENST00000474025 MAP3K5Q99683 1374 aa7.42□□□□□ -1.22
SNRNP40-204ENST00000474025 EXOC5O00471 708 aa7.41□□□□□ -1.22
SNRNP40-204ENST00000474025 GIGYF1O75420 1035 aaPredicted RBP7.41□□□□□ -1.22
SNRNP40-204ENST00000474025 EVC2Q86UK5 1308 aa7.41□□□□□ -1.22
SNRNP40-204ENST00000474025 TTC21AQ8NDW8 1320 aa7.41□□□□□ -1.22
SNRNP40-204ENST00000474025 CHD4Q14839 1912 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 GABBR2O75899 941 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 ZNF827Q17R98 1081 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 ARXQ96QS3 562 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 ERBB3P21860 1342 aa7.4□□□□□ -1.22
SNRNP40-204ENST00000474025 PCNTO95613 3336 aa7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 BTAF1O14981 1849 aa7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 USP54Q70EL1 1684 aa7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 KTN1Q86UP2 1357 aaKnown RBP7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 CLCN6P51797 869 aa7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 LRRC4BQ9NT99 713 aa7.39□□□□□ -1.23
SNRNP40-204ENST00000474025 MON2Q7Z3U7 1717 aa7.38□□□□□ -1.23
SNRNP40-204ENST00000474025 USP31Q70CQ4 1352 aa7.38□□□□□ -1.23
SNRNP40-204ENST00000474025 IL2RBP14784 551 aa7.38□□□□□ -1.23
SNRNP40-204ENST00000474025 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
SNRNP40-204ENST00000474025 ROCK2O75116 1388 aaKnown RBP7.37□□□□□ -1.23
SNRNP40-204ENST00000474025 SBNO2Q9Y2G9 1366 aa7.37□□□□□ -1.23
SNRNP40-204ENST00000474025 L3MBTL2Q969R5 705 aa7.37□□□□□ -1.23
SNRNP40-204ENST00000474025 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
SNRNP40-204ENST00000474025 LTN1O94822 1766 aa7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 COL24A1Q17RW2 1714 aa7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 QSER1Q2KHR3 1735 aa7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 NME9Q86XW9 330 aa7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 ANKRD24Q8TF21 1146 aa7.36□□□□□ -1.23
SNRNP40-204ENST00000474025 SHANK3Q9BYB0 1731 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 PNPLA7Q6ZV29 1317 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 GPR162Q16538 588 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 SLC27A3Q5K4L6 730 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 SLC16A10Q8TF71 515 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 TUBGCP6Q96RT7 1819 aa7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 EDC4Q6P2E9 1401 aaKnown RBP7.35□□□□□ -1.23
SNRNP40-204ENST00000474025 POLD1P28340 1107 aa7.34□□□□□ -1.23
SNRNP40-204ENST00000474025 KLHL34Q8N239 644 aa7.34□□□□□ -1.23
SNRNP40-204ENST00000474025 NLGN2Q8NFZ4 835 aa7.34□□□□□ -1.23
SNRNP40-204ENST00000474025 NSD2O96028 1365 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 KAT6BQ8WYB5 2073 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 FAM208AQ9UK61 1670 aaKnown RBP7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 KCNQ4P56696 695 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 DDX54Q8TDD1 881 aaKnown RBP7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 TFCP2L1Q9NZI6 479 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 A0A1W2PP64 1363 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 ANKRD36BQ8N2N9 1353 aa7.33□□□□□ -1.24
SNRNP40-204ENST00000474025 LY75O60449 1722 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 DOT1LQ8TEK3 1739 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 YBX3P16989 372 aaKnown RBP eCLIP7.32□□□□□ -1.244e-12■■□□□ 12.8
SNRNP40-204ENST00000474025 PELP1Q8IZL8 1130 aaKnown RBP7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 IP6K1Q92551 441 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 SIN3AQ96ST3 1273 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 MEGF6O75095 1541 aa7.32□□□□□ -1.24
SNRNP40-204ENST00000474025 PRIM1P49642 420 aaKnown RBP7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 MNX1P50219 401 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 ZNF579Q8NAF0 562 aaKnown RBP7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 TMC1Q8TDI8 760 aa7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 SYTL4Q96C24 671 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-204ENST00000474025 SLC24A1O60721 1099 aa7.3□□□□□ -1.24
SNRNP40-204ENST00000474025 COL23A1Q86Y22 540 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-204ENST00000474025 LTV1Q96GA3 475 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-204ENST00000474025 TERF2IPQ9NYB0 399 aa7.3□□□□□ -1.24
SNRNP40-204ENST00000474025 CCNL1Q9UK58 526 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-204ENST00000474025 MAP3K19Q56UN5 1328 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 ATP10DQ9P241 1426 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 HSPA6P17066 643 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 HMGB2P26583 209 aaKnown RBP7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 HOXC9P31274 260 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 NEUROD1Q13562 356 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 ZCRB1Q8TBF4 217 aaKnown RBP7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 CARD11Q9BXL7 1154 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 ADCY9O60503 1353 aa7.29□□□□□ -1.24
SNRNP40-204ENST00000474025 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
SNRNP40-204ENST00000474025 RTL1A6NKG5 1358 aa7.28□□□□□ -1.24
SNRNP40-204ENST00000474025 USP47Q96K76 1375 aa7.28□□□□□ -1.24
SNRNP40-204ENST00000474025 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
SNRNP40-204ENST00000474025 FBLN1P23142 703 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 AMPHP49418 695 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 COG3Q96JB2 828 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 CD2APQ9Y5K6 639 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 C5P01031 1676 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 CGNL1Q0VF96 1302 aa7.27□□□□□ -1.25
SNRNP40-204ENST00000474025 PALLDQ8WX93 1383 aa7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 NBPF6Q5VWK0 638 aa7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 NBPF4Q96M43 638 aa7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 TESK2Q96S53 571 aa7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 TOGARAM1Q9Y4F4 1720 aa7.26□□□□□ -1.25
SNRNP40-204ENST00000474025 TAF1LQ8IZX4 1826 aa7.25□□□□□ -1.25
SNRNP40-204ENST00000474025 APLP1P51693 650 aa7.25□□□□□ -1.25
SNRNP40-204ENST00000474025 RRS1Q15050 365 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 943.3 ms