RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
COL16A1-210ENST00000474000 BTAF1O14981 1849 aa16.77■□□□□ 0.27
COL16A1-210ENST00000474000 LTN1O94822 1766 aa16.77■□□□□ 0.27
COL16A1-210ENST00000474000 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
COL16A1-210ENST00000474000 KCNQ4P56696 695 aa16.75■□□□□ 0.27
COL16A1-210ENST00000474000 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
COL16A1-210ENST00000474000 SLC27A3Q5K4L6 730 aa16.75■□□□□ 0.27
COL16A1-210ENST00000474000 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
COL16A1-210ENST00000474000 GPR162Q16538 588 aa16.74■□□□□ 0.27
COL16A1-210ENST00000474000 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
COL16A1-210ENST00000474000 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
COL16A1-210ENST00000474000 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
COL16A1-210ENST00000474000 PNPLA7Q6ZV29 1317 aa16.73■□□□□ 0.27
COL16A1-210ENST00000474000 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
COL16A1-210ENST00000474000 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
COL16A1-210ENST00000474000 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
COL16A1-210ENST00000474000 CGNL1Q0VF96 1302 aa16.72■□□□□ 0.27
COL16A1-210ENST00000474000 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
COL16A1-210ENST00000474000 POLD1P28340 1107 aa16.71■□□□□ 0.27
COL16A1-210ENST00000474000 C1QTNF8P60827 252 aa16.71■□□□□ 0.27
COL16A1-210ENST00000474000 TFCP2L1Q9NZI6 479 aa16.71■□□□□ 0.27
COL16A1-210ENST00000474000 INSRP06213 1382 aa16.71■□□□□ 0.27
COL16A1-210ENST00000474000 MEGF6O75095 1541 aa16.7■□□□□ 0.26
COL16A1-210ENST00000474000 CHD4Q14839 1912 aa16.7■□□□□ 0.26
COL16A1-210ENST00000474000 SENP3-EIF4A1A0A087X0R7 540 aa16.7■□□□□ 0.26
COL16A1-210ENST00000474000 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
COL16A1-210ENST00000474000 NSD2O96028 1365 aa16.69■□□□□ 0.26
COL16A1-210ENST00000474000 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
COL16A1-210ENST00000474000 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
COL16A1-210ENST00000474000 FLT4P35916 1363 aa16.68■□□□□ 0.26
COL16A1-210ENST00000474000 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
COL16A1-210ENST00000474000 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
COL16A1-210ENST00000474000 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
COL16A1-210ENST00000474000 CLSPNQ9HAW4 1339 aa16.68■□□□□ 0.26
COL16A1-210ENST00000474000 CCNL1Q9UK58 526 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-210ENST00000474000 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
COL16A1-210ENST00000474000 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
COL16A1-210ENST00000474000 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
COL16A1-210ENST00000474000 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
COL16A1-210ENST00000474000 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
COL16A1-210ENST00000474000 CYP27B1O15528 508 aa16.64■□□□□ 0.25
COL16A1-210ENST00000474000 MSH5O43196 834 aa16.64■□□□□ 0.25
COL16A1-210ENST00000474000 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-210ENST00000474000 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
COL16A1-210ENST00000474000 QSER1Q2KHR3 1735 aa16.64■□□□□ 0.25
COL16A1-210ENST00000474000 COL24A1Q17RW2 1714 aa16.63■□□□□ 0.25
COL16A1-210ENST00000474000 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
COL16A1-210ENST00000474000 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
COL16A1-210ENST00000474000 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
COL16A1-210ENST00000474000 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
COL16A1-210ENST00000474000 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
COL16A1-210ENST00000474000 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
COL16A1-210ENST00000474000 LY75O60449 1722 aa16.62■□□□□ 0.25
COL16A1-210ENST00000474000 GIGYF1O75420 1035 aaPredicted RBP16.61■□□□□ 0.25
COL16A1-210ENST00000474000 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL16A1-210ENST00000474000 SHANK3Q9BYB0 1731 aa16.6■□□□□ 0.25
COL16A1-210ENST00000474000 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
COL16A1-210ENST00000474000 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
COL16A1-210ENST00000474000 EYA1Q99502 592 aa16.6■□□□□ 0.25
COL16A1-210ENST00000474000 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
COL16A1-210ENST00000474000 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL16A1-210ENST00000474000 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
COL16A1-210ENST00000474000 GRIN3BO60391 1043 aa16.58■□□□□ 0.24
COL16A1-210ENST00000474000 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
COL16A1-210ENST00000474000 HMGB2P26583 209 aaKnown RBP16.58■□□□□ 0.24
COL16A1-210ENST00000474000 PIGBQ92521 554 aa16.58■□□□□ 0.24
COL16A1-210ENST00000474000 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
COL16A1-210ENST00000474000 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
COL16A1-210ENST00000474000 PANK3Q9H999 370 aa16.57■□□□□ 0.24
COL16A1-210ENST00000474000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.57■□□□□ 0.242e-9■■■■□ 23.1
COL16A1-210ENST00000474000 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
COL16A1-210ENST00000474000 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
COL16A1-210ENST00000474000 FLAD1Q8NFF5 587 aa16.55■□□□□ 0.24
COL16A1-210ENST00000474000 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-210ENST00000474000 IFNL2Q8IZJ0 200 aa16.54■□□□□ 0.24
COL16A1-210ENST00000474000 PHKG2P15735 406 aa16.53■□□□□ 0.24
COL16A1-210ENST00000474000 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
COL16A1-210ENST00000474000 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
COL16A1-210ENST00000474000 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.24
COL16A1-210ENST00000474000 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
COL16A1-210ENST00000474000 AK7Q96M32 723 aa16.52■□□□□ 0.24
COL16A1-210ENST00000474000 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
COL16A1-210ENST00000474000 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
COL16A1-210ENST00000474000 SIK1P57059 783 aa16.51■□□□□ 0.23
COL16A1-210ENST00000474000 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
COL16A1-210ENST00000474000 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
COL16A1-210ENST00000474000 ATP10DQ9P241 1426 aa16.49■□□□□ 0.23
COL16A1-210ENST00000474000 C5P01031 1676 aa16.49■□□□□ 0.23
COL16A1-210ENST00000474000 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
COL16A1-210ENST00000474000 PHF14O94880 888 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
COL16A1-210ENST00000474000 ITPK1Q13572 414 aa16.47■□□□□ 0.23
COL16A1-210ENST00000474000 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-210ENST00000474000 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
COL16A1-210ENST00000474000 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
COL16A1-210ENST00000474000 SSFA2P28290 1259 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms