RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 PROM2Q8N271 834 aa20.43■□□□□ 0.86
PLXNB1-213ENST00000473996 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
PLXNB1-213ENST00000473996 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
PLXNB1-213ENST00000473996 KCNQ2O43526 872 aa20.42■□□□□ 0.86
PLXNB1-213ENST00000473996 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
PLXNB1-213ENST00000473996 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
PLXNB1-213ENST00000473996 ANO8Q9HCE9 1232 aaPredicted RBP20.42■□□□□ 0.86
PLXNB1-213ENST00000473996 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
PLXNB1-213ENST00000473996 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
PLXNB1-213ENST00000473996 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
PLXNB1-213ENST00000473996 ACSBG1Q96GR2 724 aa20.4■□□□□ 0.86
PLXNB1-213ENST00000473996 BTAF1O14981 1849 aa20.39■□□□□ 0.85
PLXNB1-213ENST00000473996 MTHFSP49914 203 aa20.38■□□□□ 0.85
PLXNB1-213ENST00000473996 SPON1Q9HCB6 807 aa20.38■□□□□ 0.85
PLXNB1-213ENST00000473996 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
PLXNB1-213ENST00000473996 EIF4A2Q14240 407 aaKnown RBP20.36■□□□□ 0.85
PLXNB1-213ENST00000473996 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
PLXNB1-213ENST00000473996 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
PLXNB1-213ENST00000473996 RAPGEF4Q8WZA2 1011 aa20.36■□□□□ 0.85
PLXNB1-213ENST00000473996 EYA1Q99502 592 aa20.35■□□□□ 0.85
PLXNB1-213ENST00000473996 MEGF6O75095 1541 aa20.34■□□□□ 0.85
PLXNB1-213ENST00000473996 SHANK3Q9BYB0 1731 aa20.34■□□□□ 0.85
PLXNB1-213ENST00000473996 TATP17735 454 aaPredicted RBP20.34■□□□□ 0.85
PLXNB1-213ENST00000473996 STK32BQ9NY57 414 aa20.34■□□□□ 0.85
PLXNB1-213ENST00000473996 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.85
PLXNB1-213ENST00000473996 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
PLXNB1-213ENST00000473996 SLC15A2Q16348 729 aa20.32■□□□□ 0.84
PLXNB1-213ENST00000473996 PPP1R1BQ9UD71 204 aaPredicted RBP20.31■□□□□ 0.84
PLXNB1-213ENST00000473996 PDGFDQ9GZP0 370 aaPredicted RBP20.3■□□□□ 0.84
PLXNB1-213ENST00000473996 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
PLXNB1-213ENST00000473996 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
PLXNB1-213ENST00000473996 IL13P35225 146 aa20.29■□□□□ 0.84
PLXNB1-213ENST00000473996 ANKRD26Q9UPS8 1709 aa20.28■□□□□ 0.84
PLXNB1-213ENST00000473996 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
PLXNB1-213ENST00000473996 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
PLXNB1-213ENST00000473996 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
PLXNB1-213ENST00000473996 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
PLXNB1-213ENST00000473996 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
PLXNB1-213ENST00000473996 ZBTB7AO95365 584 aa20.26■□□□□ 0.83
PLXNB1-213ENST00000473996 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
PLXNB1-213ENST00000473996 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
PLXNB1-213ENST00000473996 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
PLXNB1-213ENST00000473996 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
PLXNB1-213ENST00000473996 RALBP1Q15311 655 aa20.25■□□□□ 0.83
PLXNB1-213ENST00000473996 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
PLXNB1-213ENST00000473996 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
PLXNB1-213ENST00000473996 LY75O60449 1722 aa20.23■□□□□ 0.83
PLXNB1-213ENST00000473996 PTGER2P43116 358 aa20.23■□□□□ 0.83
PLXNB1-213ENST00000473996 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
PLXNB1-213ENST00000473996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.23■□□□□ 0.831e-8■□□□□ 9.1
PLXNB1-213ENST00000473996 PCDH11XQ9BZA7 1347 aa20.23■□□□□ 0.83
PLXNB1-213ENST00000473996 PCDH11YQ9BZA8 1340 aa20.23■□□□□ 0.83
PLXNB1-213ENST00000473996 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
PLXNB1-213ENST00000473996 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
PLXNB1-213ENST00000473996 ATF5Q9Y2D1 282 aaPredicted RBP20.22■□□□□ 0.83
PLXNB1-213ENST00000473996 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
PLXNB1-213ENST00000473996 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
PLXNB1-213ENST00000473996 QSER1Q2KHR3 1735 aa20.2■□□□□ 0.82
PLXNB1-213ENST00000473996 PKD1L3Q7Z443 1732 aa20.2■□□□□ 0.82
PLXNB1-213ENST00000473996 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
PLXNB1-213ENST00000473996 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
PLXNB1-213ENST00000473996 AKT1S1Q96B36 256 aa20.2■□□□□ 0.82
PLXNB1-213ENST00000473996 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
PLXNB1-213ENST00000473996 SGIP1Q9BQI5 828 aa20.18■□□□□ 0.82
PLXNB1-213ENST00000473996 CYP27B1O15528 508 aa20.17■□□□□ 0.82
PLXNB1-213ENST00000473996 HMOX1P09601 288 aa20.17■□□□□ 0.82
PLXNB1-213ENST00000473996 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
PLXNB1-213ENST00000473996 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
PLXNB1-213ENST00000473996 KCNQ4P56696 695 aa20.16■□□□□ 0.82
PLXNB1-213ENST00000473996 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
PLXNB1-213ENST00000473996 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
PLXNB1-213ENST00000473996 ITGB4P16144 1822 aa20.15■□□□□ 0.82
PLXNB1-213ENST00000473996 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.81
PLXNB1-213ENST00000473996 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
PLXNB1-213ENST00000473996 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
PLXNB1-213ENST00000473996 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
PLXNB1-213ENST00000473996 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
PLXNB1-213ENST00000473996 KDRP35968 1356 aa20.13■□□□□ 0.81
PLXNB1-213ENST00000473996 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
PLXNB1-213ENST00000473996 PHKG2P15735 406 aa20.13■□□□□ 0.81
PLXNB1-213ENST00000473996 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
PLXNB1-213ENST00000473996 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
PLXNB1-213ENST00000473996 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
PLXNB1-213ENST00000473996 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
PLXNB1-213ENST00000473996 PRKRIP1Q9H875 184 aaPredicted RBP20.12■□□□□ 0.81
PLXNB1-213ENST00000473996 MYBBP1AQ9BQG0 1328 aaKnown RBP20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 ARXQ96QS3 562 aa20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
PLXNB1-213ENST00000473996 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
PLXNB1-213ENST00000473996 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
PLXNB1-213ENST00000473996 C5P01031 1676 aa20.1■□□□□ 0.81
PLXNB1-213ENST00000473996 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
PLXNB1-213ENST00000473996 UTRNP46939 3433 aa20.09■□□□□ 0.81
PLXNB1-213ENST00000473996 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
PLXNB1-213ENST00000473996 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.81
PLXNB1-213ENST00000473996 FCHSD2O94868 740 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms