RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
TARDBP-206ENST00000473869 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
TARDBP-206ENST00000473869 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
TARDBP-206ENST00000473869 CAMTA1Q9Y6Y1 1673 aa14.03□□□□□ -0.16
TARDBP-206ENST00000473869 PLIN1O60240 522 aa14.02□□□□□ -0.16
TARDBP-206ENST00000473869 ZNF853P0CG23 659 aa14.02□□□□□ -0.16
TARDBP-206ENST00000473869 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.16
TARDBP-206ENST00000473869 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.16
TARDBP-206ENST00000473869 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.16
TARDBP-206ENST00000473869 MAP3K5Q99683 1374 aa14.02□□□□□ -0.17
TARDBP-206ENST00000473869 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
TARDBP-206ENST00000473869 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
TARDBP-206ENST00000473869 BCAR3O75815 825 aa14.02□□□□□ -0.17
TARDBP-206ENST00000473869 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
TARDBP-206ENST00000473869 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
TARDBP-206ENST00000473869 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
TARDBP-206ENST00000473869 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
TARDBP-206ENST00000473869 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
TARDBP-206ENST00000473869 LMO7Q8WWI1 1683 aa14□□□□□ -0.17
TARDBP-206ENST00000473869 JCADQ9P266 1359 aa14□□□□□ -0.17
TARDBP-206ENST00000473869 ADAMTS2O95450 1211 aa13.99□□□□□ -0.17
TARDBP-206ENST00000473869 CANXP27824 592 aaKnown RBP13.99□□□□□ -0.17
TARDBP-206ENST00000473869 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
TARDBP-206ENST00000473869 CHL1O00533 1208 aa13.98□□□□□ -0.17
TARDBP-206ENST00000473869 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
TARDBP-206ENST00000473869 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
TARDBP-206ENST00000473869 CRB1P82279 1406 aa13.98□□□□□ -0.17
TARDBP-206ENST00000473869 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
TARDBP-206ENST00000473869 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
TARDBP-206ENST00000473869 EVA1CP58658 441 aa13.97□□□□□ -0.17
TARDBP-206ENST00000473869 AKAP4Q5JQC9 854 aa13.97□□□□□ -0.17
TARDBP-206ENST00000473869 TOM1L2Q6ZVM7 507 aa13.97□□□□□ -0.17
TARDBP-206ENST00000473869 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
TARDBP-206ENST00000473869 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
TARDBP-206ENST00000473869 BCL2L13Q9BXK5 485 aa13.96□□□□□ -0.17
TARDBP-206ENST00000473869 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
TARDBP-206ENST00000473869 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.18
TARDBP-206ENST00000473869 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.18
TARDBP-206ENST00000473869 PLEKHG2Q9H7P9 1386 aa13.95□□□□□ -0.18
TARDBP-206ENST00000473869 EXOC6Q8TAG9 804 aa13.95□□□□□ -0.18
TARDBP-206ENST00000473869 STRN4Q9NRL3 753 aa13.95□□□□□ -0.18
TARDBP-206ENST00000473869 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
TARDBP-206ENST00000473869 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
TARDBP-206ENST00000473869 VAMP4O75379 141 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
TARDBP-206ENST00000473869 ALDH1L2Q3SY69 923 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 C20orf194Q5TEA3 1177 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 SSH1Q8WYL5 1049 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.183e-7■■□□□ 13.6
TARDBP-206ENST00000473869 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
TARDBP-206ENST00000473869 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
TARDBP-206ENST00000473869 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
TARDBP-206ENST00000473869 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
TARDBP-206ENST00000473869 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 TSPYL6Q8N831 410 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 MEGF6O75095 1541 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
TARDBP-206ENST00000473869 TEFQ10587 303 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 LRP6O75581 1613 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
TARDBP-206ENST00000473869 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 PLCH1Q4KWH8 1693 aa13.92□□□□□ -0.18
TARDBP-206ENST00000473869 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
TARDBP-206ENST00000473869 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
TARDBP-206ENST00000473869 MS4A1P11836 297 aa13.91□□□□□ -0.18
TARDBP-206ENST00000473869 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
TARDBP-206ENST00000473869 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
TARDBP-206ENST00000473869 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
TARDBP-206ENST00000473869 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
TARDBP-206ENST00000473869 IPO8O15397 1037 aaKnown RBP13.9□□□□□ -0.18
TARDBP-206ENST00000473869 IFNL2Q8IZJ0 200 aa13.9□□□□□ -0.18
TARDBP-206ENST00000473869 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
TARDBP-206ENST00000473869 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
TARDBP-206ENST00000473869 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
TARDBP-206ENST00000473869 VIRMAQ69YN4 1812 aaKnown RBP13.9□□□□□ -0.18
TARDBP-206ENST00000473869 PARP4Q9UKK3 1724 aaKnown RBP13.89□□□□□ -0.19
TARDBP-206ENST00000473869 IL2RBP14784 551 aa13.89□□□□□ -0.19
TARDBP-206ENST00000473869 PHKG2P15735 406 aa13.89□□□□□ -0.19
TARDBP-206ENST00000473869 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
TARDBP-206ENST00000473869 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
TARDBP-206ENST00000473869 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
TARDBP-206ENST00000473869 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
TARDBP-206ENST00000473869 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
TARDBP-206ENST00000473869 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
TARDBP-206ENST00000473869 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
TARDBP-206ENST00000473869 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
TARDBP-206ENST00000473869 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
TARDBP-206ENST00000473869 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
TARDBP-206ENST00000473869 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
TARDBP-206ENST00000473869 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
TARDBP-206ENST00000473869 MRPL50Q8N5N7 158 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms