RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
MACF1-215ENST00000473843 TOMM70O94826 608 aa16.34■□□□□ 0.21
MACF1-215ENST00000473843 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
MACF1-215ENST00000473843 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
MACF1-215ENST00000473843 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.21
MACF1-215ENST00000473843 SLC34A2O95436 690 aa16.33■□□□□ 0.2
MACF1-215ENST00000473843 IL2RBP14784 551 aa16.33■□□□□ 0.2
MACF1-215ENST00000473843 KLRG1Q96E93 195 aa16.33■□□□□ 0.2
MACF1-215ENST00000473843 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
MACF1-215ENST00000473843 KCNQ4P56696 695 aa16.31■□□□□ 0.2
MACF1-215ENST00000473843 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
MACF1-215ENST00000473843 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
MACF1-215ENST00000473843 SOX12O15370 315 aa16.3■□□□□ 0.2
MACF1-215ENST00000473843 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
MACF1-215ENST00000473843 LTN1O94822 1766 aa16.3■□□□□ 0.2
MACF1-215ENST00000473843 ERBB3P21860 1342 aa16.29■□□□□ 0.2
MACF1-215ENST00000473843 NLRP2Q9NX02 1062 aa16.29■□□□□ 0.2
MACF1-215ENST00000473843 CABP1Q9NZU7 370 aa16.29■□□□□ 0.2
MACF1-215ENST00000473843 C5P01031 1676 aa16.29■□□□□ 0.2
MACF1-215ENST00000473843 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
MACF1-215ENST00000473843 USP54Q70EL1 1684 aa16.27■□□□□ 0.19
MACF1-215ENST00000473843 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
MACF1-215ENST00000473843 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
MACF1-215ENST00000473843 NSD2O96028 1365 aa16.26■□□□□ 0.19
MACF1-215ENST00000473843 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
MACF1-215ENST00000473843 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
MACF1-215ENST00000473843 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
MACF1-215ENST00000473843 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
MACF1-215ENST00000473843 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
MACF1-215ENST00000473843 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
MACF1-215ENST00000473843 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
MACF1-215ENST00000473843 HTRA3P83110 453 aa16.23■□□□□ 0.19
MACF1-215ENST00000473843 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
MACF1-215ENST00000473843 PCNTO95613 3336 aa16.23■□□□□ 0.19
MACF1-215ENST00000473843 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
MACF1-215ENST00000473843 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
MACF1-215ENST00000473843 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
MACF1-215ENST00000473843 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
MACF1-215ENST00000473843 NMRK2Q9NPI5 230 aa16.21■□□□□ 0.19
MACF1-215ENST00000473843 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
MACF1-215ENST00000473843 FSTL1Q12841 308 aa16.2■□□□□ 0.18
MACF1-215ENST00000473843 UBR3Q6ZT12 1888 aa16.2■□□□□ 0.18
MACF1-215ENST00000473843 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
MACF1-215ENST00000473843 USP47Q96K76 1375 aa16.19■□□□□ 0.18
MACF1-215ENST00000473843 ANKRD24Q8TF21 1146 aa16.19■□□□□ 0.18
MACF1-215ENST00000473843 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
MACF1-215ENST00000473843 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
MACF1-215ENST00000473843 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
MACF1-215ENST00000473843 KIAA1551Q9HCM1 1747 aa16.18■□□□□ 0.18
MACF1-215ENST00000473843 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
MACF1-215ENST00000473843 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
MACF1-215ENST00000473843 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
MACF1-215ENST00000473843 USP31Q70CQ4 1352 aa16.15■□□□□ 0.18
MACF1-215ENST00000473843 TNRC6CQ9HCJ0 1690 aaKnown RBP16.15■□□□□ 0.18
MACF1-215ENST00000473843 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
MACF1-215ENST00000473843 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
MACF1-215ENST00000473843 PCDH10Q9P2E7 1040 aa16.15■□□□□ 0.18
MACF1-215ENST00000473843 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
MACF1-215ENST00000473843 C10orf71Q711Q0 1435 aa16.14■□□□□ 0.17
MACF1-215ENST00000473843 NBPF1Q3BBV0 1214 aa16.14■□□□□ 0.17
MACF1-215ENST00000473843 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
MACF1-215ENST00000473843 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
MACF1-215ENST00000473843 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
MACF1-215ENST00000473843 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
MACF1-215ENST00000473843 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
MACF1-215ENST00000473843 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
MACF1-215ENST00000473843 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
MACF1-215ENST00000473843 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
MACF1-215ENST00000473843 AK7Q96M32 723 aa16.1■□□□□ 0.17
MACF1-215ENST00000473843 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
MACF1-215ENST00000473843 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
MACF1-215ENST00000473843 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
MACF1-215ENST00000473843 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
MACF1-215ENST00000473843 DSG3P32926 999 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 MEGF6O75095 1541 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 ITGB4P16144 1822 aa16.08■□□□□ 0.16
MACF1-215ENST00000473843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
MACF1-215ENST00000473843 PHF14O94880 888 aa16.07■□□□□ 0.16
MACF1-215ENST00000473843 AMIGO3Q86WK7 504 aa16.07■□□□□ 0.16
MACF1-215ENST00000473843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
MACF1-215ENST00000473843 SBF1O95248 1867 aa16.07■□□□□ 0.16
MACF1-215ENST00000473843 TGFB2P61812 414 aa16.06■□□□□ 0.16
MACF1-215ENST00000473843 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
MACF1-215ENST00000473843 NME9Q86XW9 330 aa16.06■□□□□ 0.16
MACF1-215ENST00000473843 SSFA2P28290 1259 aa16.05■□□□□ 0.16
MACF1-215ENST00000473843 IP6K1Q92551 441 aa16.05■□□□□ 0.16
MACF1-215ENST00000473843 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
MACF1-215ENST00000473843 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
MACF1-215ENST00000473843 SBNO2Q9Y2G9 1366 aa16.03■□□□□ 0.16
MACF1-215ENST00000473843 A0A0G2JLW4 131 aa16.02■□□□□ 0.16
MACF1-215ENST00000473843 FCHSD2O94868 740 aa16.02■□□□□ 0.16
MACF1-215ENST00000473843 RRAGCQ9HB90 399 aa16.02■□□□□ 0.16
MACF1-215ENST00000473843 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
MACF1-215ENST00000473843 MMP10P09238 476 aa16.01■□□□□ 0.15
MACF1-215ENST00000473843 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
MACF1-215ENST00000473843 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms