RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 TSC1Q92574 1164 aa16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 ZNF830Q96NB3 372 aaPredicted RBP16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
NOTCH4-203ENST00000473562 ABCC3O15438 1527 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
NOTCH4-203ENST00000473562 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
NOTCH4-203ENST00000473562 TRIM6-TRIM34B2RNG4 842 aa16.18■□□□□ 0.18
NOTCH4-203ENST00000473562 MED14O60244 1454 aa16.18■□□□□ 0.18
NOTCH4-203ENST00000473562 PTPRMP28827 1452 aa16.18■□□□□ 0.18
NOTCH4-203ENST00000473562 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 ST18O60284 1047 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 HSP90AB2PQ58FF8 381 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 PPP1R9BQ96SB3 815 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 ANKRD44Q8N8A2 993 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 COG3Q96JB2 828 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
NOTCH4-203ENST00000473562 MYO5BQ9ULV0 1848 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 PLCB2Q00722 1185 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 NUCB2P80303 420 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 IL1RAPL2Q9NP60 686 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
NOTCH4-203ENST00000473562 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 IL25Q9H293 177 aa16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 MAP2P11137 1827 aaKnown RBP16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 RIMS2Q9UQ26 1411 aa16.15■□□□□ 0.18
NOTCH4-203ENST00000473562 CYP2E1P05181 493 aaPredicted RBP16.14■□□□□ 0.17
NOTCH4-203ENST00000473562 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
NOTCH4-203ENST00000473562 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
NOTCH4-203ENST00000473562 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
NOTCH4-203ENST00000473562 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 OFD1O75665 1012 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 UQCRHLA0A096LP55 91 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 ERC2O15083 957 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 UQCRHP07919 91 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
NOTCH4-203ENST00000473562 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 PNMA6EA0A0J9YXQ4 647 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 PDE1AP54750 535 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 ZNF445P59923 1031 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
NOTCH4-203ENST00000473562 CPA1P15085 419 aa16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 BCL11BQ9C0K0 894 aaPredicted RBP16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 PIK3C2BO00750 1634 aa16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
NOTCH4-203ENST00000473562 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
NOTCH4-203ENST00000473562 REC8O95072 547 aa16.1■□□□□ 0.17
NOTCH4-203ENST00000473562 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
NOTCH4-203ENST00000473562 TPM2P07951 284 aa16.09■□□□□ 0.17
NOTCH4-203ENST00000473562 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
NOTCH4-203ENST00000473562 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
NOTCH4-203ENST00000473562 HECW2Q9P2P5 1572 aa16.08■□□□□ 0.17
NOTCH4-203ENST00000473562 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 RPAP2Q8IXW5 612 aaPredicted RBP16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 PTMSP20962 102 aa16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 LRSAM1Q6UWE0 723 aa16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.08■□□□□ 0.16
NOTCH4-203ENST00000473562 RGS12O14924 1447 aa16.07■□□□□ 0.16
NOTCH4-203ENST00000473562 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
NOTCH4-203ENST00000473562 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
NOTCH4-203ENST00000473562 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
NOTCH4-203ENST00000473562 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
NOTCH4-203ENST00000473562 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
NOTCH4-203ENST00000473562 CPS1P31327 1500 aa16.06■□□□□ 0.16
NOTCH4-203ENST00000473562 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
NOTCH4-203ENST00000473562 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
NOTCH4-203ENST00000473562 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
NOTCH4-203ENST00000473562 CHL1O00533 1208 aa16.05■□□□□ 0.16
NOTCH4-203ENST00000473562 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
NOTCH4-203ENST00000473562 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-203ENST00000473562 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-203ENST00000473562 METP08581 1390 aa16.04■□□□□ 0.16
NOTCH4-203ENST00000473562 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms