RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
A1CF-209ENST00000473480 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
A1CF-209ENST00000473480 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
A1CF-209ENST00000473480 PRG4Q92954 1404 aaPredicted RBP12.61□□□□□ -0.39
A1CF-209ENST00000473480 ZIC2O95409 532 aaPredicted RBP12.6□□□□□ -0.39
A1CF-209ENST00000473480 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
A1CF-209ENST00000473480 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
A1CF-209ENST00000473480 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
A1CF-209ENST00000473480 NUP160Q12769 1436 aa12.6□□□□□ -0.39
A1CF-209ENST00000473480 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
A1CF-209ENST00000473480 RAD21O60216 631 aa12.59□□□□□ -0.39
A1CF-209ENST00000473480 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
A1CF-209ENST00000473480 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
A1CF-209ENST00000473480 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
A1CF-209ENST00000473480 ESPNB1AK53 854 aa12.58□□□□□ -0.4
A1CF-209ENST00000473480 PPP1R26Q5T8A7 1209 aaPredicted RBP12.58□□□□□ -0.4
A1CF-209ENST00000473480 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
A1CF-209ENST00000473480 PGPEP1Q9NXJ5 209 aa12.58□□□□□ -0.4
A1CF-209ENST00000473480 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
A1CF-209ENST00000473480 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
A1CF-209ENST00000473480 WWC1Q8IX03 1113 aa12.57□□□□□ -0.4
A1CF-209ENST00000473480 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
A1CF-209ENST00000473480 COL17A1Q9UMD9 1497 aaPredicted RBP12.57□□□□□ -0.4
A1CF-209ENST00000473480 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
A1CF-209ENST00000473480 RAB15P59190 212 aa12.55□□□□□ -0.4
A1CF-209ENST00000473480 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
A1CF-209ENST00000473480 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
A1CF-209ENST00000473480 VAC14Q08AM6 782 aa12.54□□□□□ -0.4
A1CF-209ENST00000473480 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
A1CF-209ENST00000473480 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
A1CF-209ENST00000473480 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
A1CF-209ENST00000473480 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
A1CF-209ENST00000473480 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
A1CF-209ENST00000473480 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.41
A1CF-209ENST00000473480 BMP1P13497 986 aa12.52□□□□□ -0.41
A1CF-209ENST00000473480 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
A1CF-209ENST00000473480 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
A1CF-209ENST00000473480 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
A1CF-209ENST00000473480 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
A1CF-209ENST00000473480 POTECB2RU33 542 aa12.5□□□□□ -0.41
A1CF-209ENST00000473480 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
A1CF-209ENST00000473480 MEIOBQ8N635 442 aa12.5□□□□□ -0.41
A1CF-209ENST00000473480 SOX11P35716 441 aa12.49□□□□□ -0.41
A1CF-209ENST00000473480 SCARF1Q14162 830 aa12.49□□□□□ -0.41
A1CF-209ENST00000473480 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
A1CF-209ENST00000473480 CEP126Q9P2H0 1117 aa12.49□□□□□ -0.41
A1CF-209ENST00000473480 UPP2O95045 317 aa12.48□□□□□ -0.41
A1CF-209ENST00000473480 TMPRSS4Q9NRS4 437 aa12.48□□□□□ -0.41
A1CF-209ENST00000473480 GLI2P10070 1586 aa12.47□□□□□ -0.41
A1CF-209ENST00000473480 PTPRMP28827 1452 aa12.47□□□□□ -0.41
A1CF-209ENST00000473480 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
A1CF-209ENST00000473480 Q6ZVU0 165 aa12.47□□□□□ -0.41
A1CF-209ENST00000473480 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
A1CF-209ENST00000473480 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
A1CF-209ENST00000473480 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
A1CF-209ENST00000473480 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
A1CF-209ENST00000473480 CBLBQ13191 982 aa12.45□□□□□ -0.42
A1CF-209ENST00000473480 LINC00528Q8N1L1 170 aa12.45□□□□□ -0.42
A1CF-209ENST00000473480 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
A1CF-209ENST00000473480 ZFP42Q96MM3 310 aa12.45□□□□□ -0.42
A1CF-209ENST00000473480 PURBQ96QR8 312 aaKnown RBP12.45□□□□□ -0.42
A1CF-209ENST00000473480 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
A1CF-209ENST00000473480 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
A1CF-209ENST00000473480 LILRA1O75019 489 aa12.43□□□□□ -0.42
A1CF-209ENST00000473480 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
A1CF-209ENST00000473480 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
A1CF-209ENST00000473480 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
A1CF-209ENST00000473480 BMP2P12643 396 aa12.42□□□□□ -0.42
A1CF-209ENST00000473480 C6orf118Q5T5N4 469 aa12.42□□□□□ -0.42
A1CF-209ENST00000473480 CYLDQ9NQC7 956 aa12.42□□□□□ -0.42
A1CF-209ENST00000473480 PCDHB11Q9Y5F2 797 aa12.42□□□□□ -0.42
A1CF-209ENST00000473480 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
A1CF-209ENST00000473480 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 SNRPBP14678 240 aaKnown RBP12.4□□□□□ -0.42
A1CF-209ENST00000473480 HSPA2P54652 639 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 CUX1P39880 1505 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
A1CF-209ENST00000473480 A6NJR5 290 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 ADH1AP07327 375 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
A1CF-209ENST00000473480 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 ALG2Q9H553 416 aa12.39□□□□□ -0.43
A1CF-209ENST00000473480 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
A1CF-209ENST00000473480 KIF21BO75037 1637 aa12.37□□□□□ -0.43
A1CF-209ENST00000473480 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
A1CF-209ENST00000473480 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
A1CF-209ENST00000473480 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
A1CF-209ENST00000473480 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
A1CF-209ENST00000473480 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
A1CF-209ENST00000473480 RELBQ01201 579 aa12.36□□□□□ -0.43
A1CF-209ENST00000473480 DOLKQ9UPQ8 538 aa12.36□□□□□ -0.43
A1CF-209ENST00000473480 MAP3K4Q9Y6R4 1608 aa12.36□□□□□ -0.43
A1CF-209ENST00000473480 SPINT1O43278 529 aa12.35□□□□□ -0.43
A1CF-209ENST00000473480 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
A1CF-209ENST00000473480 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
A1CF-209ENST00000473480 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms