RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 KCNQ2O43526 872 aa30.94■■■□□ 2.54
PTP4A1-203ENST00000473334 TNNT2P45379 298 aaPredicted RBP30.93■■■□□ 2.54
PTP4A1-203ENST00000473334 NBPF14Q5TI25 921 aa30.93■■■□□ 2.54
PTP4A1-203ENST00000473334 ZCRB1Q8TBF4 217 aaKnown RBP30.93■■■□□ 2.54
PTP4A1-203ENST00000473334 RAPGEF4Q8WZA2 1011 aa30.93■■■□□ 2.54
PTP4A1-203ENST00000473334 LRP5O75197 1615 aa30.92■■■□□ 2.54
PTP4A1-203ENST00000473334 KNSTRNQ9Y448 316 aa30.92■■■□□ 2.54
PTP4A1-203ENST00000473334 BTAF1O14981 1849 aa30.91■■■□□ 2.54
PTP4A1-203ENST00000473334 KAT6BQ8WYB5 2073 aa30.91■■■□□ 2.54
PTP4A1-203ENST00000473334 TATP17735 454 aaPredicted RBP30.9■■■□□ 2.54
PTP4A1-203ENST00000473334 NCAPD2Q15021 1401 aa30.9■■■□□ 2.54
PTP4A1-203ENST00000473334 DOT1LQ8TEK3 1739 aa30.88■■■□□ 2.53
PTP4A1-203ENST00000473334 MORC1Q86VD1 984 aa30.87■■■□□ 2.53
PTP4A1-203ENST00000473334 PROM2Q8N271 834 aa30.86■■■□□ 2.53
PTP4A1-203ENST00000473334 TXNRD1Q16881 649 aa30.84■■■□□ 2.53
PTP4A1-203ENST00000473334 PKD1L3Q7Z443 1732 aa30.84■■■□□ 2.53
PTP4A1-203ENST00000473334 AMER1Q5JTC6 1135 aaPredicted RBP30.82■■■□□ 2.52
PTP4A1-203ENST00000473334 EYA1Q99502 592 aa30.82■■■□□ 2.52
PTP4A1-203ENST00000473334 PCDH11XQ9BZA7 1347 aa30.81■■■□□ 2.52
PTP4A1-203ENST00000473334 PCDH11YQ9BZA8 1340 aa30.81■■■□□ 2.52
PTP4A1-203ENST00000473334 EIF4A2Q14240 407 aaKnown RBP30.81■■■□□ 2.52
PTP4A1-203ENST00000473334 ANO8Q9HCE9 1232 aaPredicted RBP30.79■■■□□ 2.52
PTP4A1-203ENST00000473334 PRIM1P49642 420 aaKnown RBP30.77■■■□□ 2.52
PTP4A1-203ENST00000473334 SYTL4Q96C24 671 aaPredicted RBP30.77■■■□□ 2.52
PTP4A1-203ENST00000473334 PER1O15534 1290 aaPredicted RBP30.76■■■□□ 2.51
PTP4A1-203ENST00000473334 PAPPAQ13219 1627 aa30.73■■■□□ 2.51
PTP4A1-203ENST00000473334 CYP27B1O15528 508 aa30.73■■■□□ 2.51
PTP4A1-203ENST00000473334 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
PTP4A1-203ENST00000473334 SPG7Q9UQ90 795 aa30.72■■■□□ 2.51
PTP4A1-203ENST00000473334 STK32BQ9NY57 414 aa30.71■■■□□ 2.51
PTP4A1-203ENST00000473334 CASZ1Q86V15 1759 aa30.71■■■□□ 2.51
PTP4A1-203ENST00000473334 LY75O60449 1722 aa30.7■■■□□ 2.51
PTP4A1-203ENST00000473334 PLEKHG2Q9H7P9 1386 aa30.7■■■□□ 2.51
PTP4A1-203ENST00000473334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.7■■■□□ 2.51
PTP4A1-203ENST00000473334 TOGARAM1Q9Y4F4 1720 aa30.7■■■□□ 2.5
PTP4A1-203ENST00000473334 SLC15A2Q16348 729 aa30.68■■■□□ 2.5
PTP4A1-203ENST00000473334 NPC1L1Q9UHC9 1359 aa30.67■■■□□ 2.5
PTP4A1-203ENST00000473334 CC2D1BQ5T0F9 858 aaKnown RBP30.67■■■□□ 2.5
PTP4A1-203ENST00000473334 SLC27A3Q5K4L6 730 aa30.66■■■□□ 2.5
PTP4A1-203ENST00000473334 LRRC4BQ9NT99 713 aa30.66■■■□□ 2.5
PTP4A1-203ENST00000473334 ITGB4P16144 1822 aa30.66■■■□□ 2.5
PTP4A1-203ENST00000473334 NKX1-1Q15270 411 aaPredicted RBP30.64■■■□□ 2.5
PTP4A1-203ENST00000473334 MTHFSP49914 203 aa30.61■■■□□ 2.49
PTP4A1-203ENST00000473334 SPON1Q9HCB6 807 aa30.61■■■□□ 2.49
PTP4A1-203ENST00000473334 IFNL2Q8IZJ0 200 aa30.6■■■□□ 2.49
PTP4A1-203ENST00000473334 PHKG2P15735 406 aa30.59■■■□□ 2.49
PTP4A1-203ENST00000473334 IL13P35225 146 aa30.59■■■□□ 2.49
PTP4A1-203ENST00000473334 MPRIPQ6WCQ1 1025 aa30.59■■■□□ 2.49
PTP4A1-203ENST00000473334 PDGFDQ9GZP0 370 aaPredicted RBP30.59■■■□□ 2.49
PTP4A1-203ENST00000473334 ZNF827Q17R98 1081 aa30.58■■■□□ 2.49
PTP4A1-203ENST00000473334 QSER1Q2KHR3 1735 aa30.57■■■□□ 2.48
PTP4A1-203ENST00000473334 AEBP1Q8IUX7 1158 aa30.57■■■□□ 2.48
PTP4A1-203ENST00000473334 KDRP35968 1356 aa30.56■■■□□ 2.48
PTP4A1-203ENST00000473334 CCNL1Q9UK58 526 aaPredicted RBP30.56■■■□□ 2.48
PTP4A1-203ENST00000473334 KCNQ4P56696 695 aa30.55■■■□□ 2.48
PTP4A1-203ENST00000473334 CNGB1Q14028 1251 aaPredicted RBP30.55■■■□□ 2.48
PTP4A1-203ENST00000473334 PLEKHO1Q53GL0 409 aaPredicted RBP30.55■■■□□ 2.48
PTP4A1-203ENST00000473334 SULT6B1Q6IMI4 303 aa30.55■■■□□ 2.48
PTP4A1-203ENST00000473334 AKT1S1Q96B36 256 aa30.55■■■□□ 2.48
PTP4A1-203ENST00000473334 PALLDQ8WX93 1383 aa30.54■■■□□ 2.48
PTP4A1-203ENST00000473334 AMOTQ4VCS5 1084 aa30.53■■■□□ 2.48
PTP4A1-203ENST00000473334 TUBGCP6Q96RT7 1819 aa30.52■■■□□ 2.48
PTP4A1-203ENST00000473334 ZBTB7AO95365 584 aa30.52■■■□□ 2.48
PTP4A1-203ENST00000473334 PIGBQ92521 554 aa30.52■■■□□ 2.48
PTP4A1-203ENST00000473334 SMARCC1Q92922 1105 aaPredicted RBP30.51■■■□□ 2.47
PTP4A1-203ENST00000473334 C5P01031 1676 aa30.51■■■□□ 2.47
PTP4A1-203ENST00000473334 ZNF530Q6P9A1 599 aaPredicted RBP30.5■■■□□ 2.47
PTP4A1-203ENST00000473334 TMOD3Q9NYL9 352 aa30.5■■■□□ 2.47
PTP4A1-203ENST00000473334 PPP1R1BQ9UD71 204 aaPredicted RBP30.5■■■□□ 2.47
PTP4A1-203ENST00000473334 HSP90AB1P08238 724 aaKnown RBP30.49■■■□□ 2.47
PTP4A1-203ENST00000473334 TAF1LQ8IZX4 1826 aa30.49■■■□□ 2.47
PTP4A1-203ENST00000473334 DIAPH1O60610 1272 aaKnown RBP30.48■■■□□ 2.47
PTP4A1-203ENST00000473334 COL3A1P02461 1466 aaPredicted RBP30.47■■■□□ 2.47
PTP4A1-203ENST00000473334 MTFR1LQ9H019 292 aa30.47■■■□□ 2.47
PTP4A1-203ENST00000473334 DCAF5Q96JK2 942 aa30.46■■■□□ 2.47
PTP4A1-203ENST00000473334 TFCP2L1Q9NZI6 479 aa30.46■■■□□ 2.47
PTP4A1-203ENST00000473334 ATF5Q9Y2D1 282 aaPredicted RBP30.46■■■□□ 2.47
PTP4A1-203ENST00000473334 HMGB2P26583 209 aaKnown RBP30.45■■■□□ 2.47
PTP4A1-203ENST00000473334 C1orf141Q5JVX7 400 aa30.44■■■□□ 2.46
PTP4A1-203ENST00000473334 KDM6AO15550 1401 aaPredicted RBP30.44■■■□□ 2.46
PTP4A1-203ENST00000473334 PNPLA7Q6ZV29 1317 aa30.44■■■□□ 2.46
PTP4A1-203ENST00000473334 ERVV-2B6SEH9 535 aa30.43■■■□□ 2.46
PTP4A1-203ENST00000473334 PTGER2P43116 358 aa30.43■■■□□ 2.46
PTP4A1-203ENST00000473334 HMOX1P09601 288 aa30.42■■■□□ 2.46
PTP4A1-203ENST00000473334 C4BP0C0L5 1744 aa30.4■■■□□ 2.46
PTP4A1-203ENST00000473334 SLC16A10Q8TF71 515 aa30.4■■■□□ 2.46
PTP4A1-203ENST00000473334 ASAP1Q9ULH1 1129 aa30.4■■■□□ 2.46
PTP4A1-203ENST00000473334 LOC102724428A0A0B4J2F2 783 aa30.38■■■□□ 2.45
PTP4A1-203ENST00000473334 SIK1P57059 783 aa30.38■■■□□ 2.45
PTP4A1-203ENST00000473334 SGIP1Q9BQI5 828 aa30.38■■■□□ 2.45
PTP4A1-203ENST00000473334 SCN11AQ9UI33 1791 aa30.38■■■□□ 2.45
PTP4A1-203ENST00000473334 ATG3Q9NT62 314 aa30.37■■■□□ 2.45
PTP4A1-203ENST00000473334 COL24A1Q17RW2 1714 aa30.36■■■□□ 2.45
PTP4A1-203ENST00000473334 CABP4P57796 275 aa30.35■■■□□ 2.45
PTP4A1-203ENST00000473334 AKAP4Q5JQC9 854 aa30.35■■■□□ 2.45
PTP4A1-203ENST00000473334 CFAP53Q96M91 514 aa30.35■■■□□ 2.45
PTP4A1-203ENST00000473334 U2SURPO15042 1029 aaKnown RBP30.34■■■□□ 2.45
PTP4A1-203ENST00000473334 PPP2R1AP30153 589 aa30.33■■■□□ 2.45
PTP4A1-203ENST00000473334 VIRMAQ69YN4 1812 aaKnown RBP30.33■■■□□ 2.45
PTP4A1-203ENST00000473334 ZNF831Q5JPB2 1677 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms