RNA–Protein interactions for RNA: ENST00000472876.5

SPECC1-209, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-209ENST00000472876 PANK3Q9H999 370 aa21.91■■□□□ 1.1
SPECC1-209ENST00000472876 HOXC9P31274 260 aa21.9■■□□□ 1.1
SPECC1-209ENST00000472876 LTV1Q96GA3 475 aaPredicted RBP21.9■■□□□ 1.1
SPECC1-209ENST00000472876 FHDC1Q9C0D6 1143 aaPredicted RBP21.9■■□□□ 1.1
SPECC1-209ENST00000472876 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
SPECC1-209ENST00000472876 LY75O60449 1722 aa21.89■■□□□ 1.1
SPECC1-209ENST00000472876 COL24A1Q17RW2 1714 aa21.89■■□□□ 1.1
SPECC1-209ENST00000472876 COG3Q96JB2 828 aa21.89■■□□□ 1.09
SPECC1-209ENST00000472876 SYT17Q9BSW7 474 aa21.89■■□□□ 1.09
SPECC1-209ENST00000472876 MEGF6O75095 1541 aa21.89■■□□□ 1.09
SPECC1-209ENST00000472876 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.09
SPECC1-209ENST00000472876 NSD2O96028 1365 aa21.88■■□□□ 1.09
SPECC1-209ENST00000472876 DDX54Q8TDD1 881 aaKnown RBP21.87■■□□□ 1.09
SPECC1-209ENST00000472876 AKT1S1Q96B36 256 aa21.87■■□□□ 1.09
SPECC1-209ENST00000472876 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
SPECC1-209ENST00000472876 RTL1A6NKG5 1358 aa21.86■■□□□ 1.09
SPECC1-209ENST00000472876 MAP3K5Q99683 1374 aa21.85■■□□□ 1.09
SPECC1-209ENST00000472876 KIF20BQ96Q89 1820 aa21.84■■□□□ 1.09
SPECC1-209ENST00000472876 FYB1O15117 783 aa21.83■■□□□ 1.09
SPECC1-209ENST00000472876 PER1O15534 1290 aaPredicted RBP21.83■■□□□ 1.09
SPECC1-209ENST00000472876 AMPHP49418 695 aa21.83■■□□□ 1.09
SPECC1-209ENST00000472876 SLC27A3Q5K4L6 730 aa21.83■■□□□ 1.09
SPECC1-209ENST00000472876 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
SPECC1-209ENST00000472876 RRS1Q15050 365 aaKnown RBP21.82■■□□□ 1.08
SPECC1-209ENST00000472876 PNPLA7Q6ZV29 1317 aa21.81■■□□□ 1.08
SPECC1-209ENST00000472876 KCNQ4P56696 695 aa21.81■■□□□ 1.08
SPECC1-209ENST00000472876 NBPF6Q5VWK0 638 aa21.81■■□□□ 1.08
SPECC1-209ENST00000472876 NBPF4Q96M43 638 aa21.81■■□□□ 1.08
SPECC1-209ENST00000472876 ARXQ96QS3 562 aa21.81■■□□□ 1.08
SPECC1-209ENST00000472876 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
SPECC1-209ENST00000472876 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
SPECC1-209ENST00000472876 GGNBP2Q9H3C7 697 aa21.8■■□□□ 1.08
SPECC1-209ENST00000472876 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
SPECC1-209ENST00000472876 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
SPECC1-209ENST00000472876 CHD4Q14839 1912 aa21.78■■□□□ 1.08
SPECC1-209ENST00000472876 CGNL1Q0VF96 1302 aa21.78■■□□□ 1.08
SPECC1-209ENST00000472876 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.08
SPECC1-209ENST00000472876 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
SPECC1-209ENST00000472876 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
SPECC1-209ENST00000472876 KNSTRNQ9Y448 316 aa21.76■■□□□ 1.07
SPECC1-209ENST00000472876 ZNF784Q8NCA9 323 aaPredicted RBP21.75■■□□□ 1.07
SPECC1-209ENST00000472876 INSRP06213 1382 aa21.74■■□□□ 1.07
SPECC1-209ENST00000472876 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
SPECC1-209ENST00000472876 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
SPECC1-209ENST00000472876 C5P01031 1676 aa21.73■■□□□ 1.07
SPECC1-209ENST00000472876 HSP90AB2PQ58FF8 381 aa21.73■■□□□ 1.07
SPECC1-209ENST00000472876 FLT4P35916 1363 aa21.73■■□□□ 1.07
SPECC1-209ENST00000472876 NPC1L1Q9UHC9 1359 aa21.73■■□□□ 1.07
SPECC1-209ENST00000472876 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
SPECC1-209ENST00000472876 GOLGB1Q14789 3259 aaKnown RBP21.72■■□□□ 1.07
SPECC1-209ENST00000472876 KIF24Q5T7B8 1368 aa21.72■■□□□ 1.07
SPECC1-209ENST00000472876 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
SPECC1-209ENST00000472876 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
SPECC1-209ENST00000472876 NCAPD2Q15021 1401 aa21.71■■□□□ 1.07
SPECC1-209ENST00000472876 CCNL1Q9UK58 526 aaPredicted RBP21.7■■□□□ 1.06
SPECC1-209ENST00000472876 RAPGEF4Q8WZA2 1011 aa21.69■■□□□ 1.06
SPECC1-209ENST00000472876 ITGB4P16144 1822 aa21.69■■□□□ 1.06
SPECC1-209ENST00000472876 CC2D1BQ5T0F9 858 aaKnown RBP21.68■■□□□ 1.06
SPECC1-209ENST00000472876 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
SPECC1-209ENST00000472876 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
SPECC1-209ENST00000472876 TATP17735 454 aaPredicted RBP21.67■■□□□ 1.06
SPECC1-209ENST00000472876 POLD1P28340 1107 aa21.67■■□□□ 1.06
SPECC1-209ENST00000472876 EMILIN1Q9Y6C2 1016 aa21.67■■□□□ 1.06
SPECC1-209ENST00000472876 CYP27B1O15528 508 aa21.66■■□□□ 1.06
SPECC1-209ENST00000472876 COL23A1Q86Y22 540 aaPredicted RBP21.66■■□□□ 1.06
SPECC1-209ENST00000472876 NLGN2Q8NFZ4 835 aa21.66■■□□□ 1.06
SPECC1-209ENST00000472876 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
SPECC1-209ENST00000472876 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
SPECC1-209ENST00000472876 GPR162Q16538 588 aa21.63■■□□□ 1.05
SPECC1-209ENST00000472876 KLHL34Q8N239 644 aa21.63■■□□□ 1.05
SPECC1-209ENST00000472876 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
SPECC1-209ENST00000472876 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
SPECC1-209ENST00000472876 MAP2P11137 1827 aaKnown RBP21.62■■□□□ 1.05
SPECC1-209ENST00000472876 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
SPECC1-209ENST00000472876 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
SPECC1-209ENST00000472876 MPRIPQ6WCQ1 1025 aa21.59■■□□□ 1.05
SPECC1-209ENST00000472876 AMIGO3Q86WK7 504 aa21.59■■□□□ 1.05
SPECC1-209ENST00000472876 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.052e-6■■■□□ 18.3
SPECC1-209ENST00000472876 NKX1-1Q15270 411 aaPredicted RBP21.58■■□□□ 1.05
SPECC1-209ENST00000472876 MSL1Q68DK7 614 aa21.58■■□□□ 1.05
SPECC1-209ENST00000472876 MSH5O43196 834 aa21.57■■□□□ 1.04
SPECC1-209ENST00000472876 PIGBQ92521 554 aa21.56■■□□□ 1.04
SPECC1-209ENST00000472876 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
SPECC1-209ENST00000472876 EYA1Q99502 592 aa21.55■■□□□ 1.04
SPECC1-209ENST00000472876 POLKQ9UBT6 870 aa21.55■■□□□ 1.04
SPECC1-209ENST00000472876 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
SPECC1-209ENST00000472876 SMARCC1Q92922 1105 aaPredicted RBP21.53■■□□□ 1.04
SPECC1-209ENST00000472876 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
SPECC1-209ENST00000472876 FLAD1Q8NFF5 587 aa21.52■■□□□ 1.04
SPECC1-209ENST00000472876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPECC1-209ENST00000472876 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
SPECC1-209ENST00000472876 SMIM5Q71RC9 77 aa21.51■■□□□ 1.03
SPECC1-209ENST00000472876 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
SPECC1-209ENST00000472876 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
SPECC1-209ENST00000472876 LINC00116Q8NCU8 138 aa21.5■■□□□ 1.03
SPECC1-209ENST00000472876 CD2APQ9Y5K6 639 aa21.5■■□□□ 1.03
SPECC1-209ENST00000472876 PHKG2P15735 406 aa21.49■■□□□ 1.03
SPECC1-209ENST00000472876 HMGB2P26583 209 aaKnown RBP21.49■■□□□ 1.03
SPECC1-209ENST00000472876 RALBP1Q15311 655 aa21.49■■□□□ 1.03
SPECC1-209ENST00000472876 COL3A1P02461 1466 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms