RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 RAPGEF4Q8WZA2 1011 aa7.72□□□□□ -1.17
EPHA4-212ENST00000472696 NBPF4Q96M43 638 aa7.72□□□□□ -1.17
EPHA4-212ENST00000472696 FBXO3Q9UK99 471 aa7.72□□□□□ -1.17
EPHA4-212ENST00000472696 NRAPQ86VF7 1730 aa7.72□□□□□ -1.17
EPHA4-212ENST00000472696 TATP17735 454 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-212ENST00000472696 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.18
EPHA4-212ENST00000472696 PLEKHO1Q53GL0 409 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-212ENST00000472696 ZNF772Q68DY9 489 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-212ENST00000472696 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
EPHA4-212ENST00000472696 TRPC5Q9UL62 973 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-212ENST00000472696 SPG7Q9UQ90 795 aa7.71□□□□□ -1.18
EPHA4-212ENST00000472696 LRP6O75581 1613 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 BCL9LQ86UU0 1499 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 PARP4Q9UKK3 1724 aaKnown RBP7.7□□□□□ -1.18
EPHA4-212ENST00000472696 HSP90AB1P08238 724 aaKnown RBP7.7□□□□□ -1.18
EPHA4-212ENST00000472696 IL2RBP14784 551 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 PRKAR2BP31323 418 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 TCP11L2Q8N4U5 519 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 LTV1Q96GA3 475 aaPredicted RBP7.7□□□□□ -1.18
EPHA4-212ENST00000472696 C8orf37Q96NL8 207 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 FOXD4L1Q9NU39 408 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 USP21Q9UK80 565 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 SPATA31A1Q5TZJ5 1347 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 SPATA31A5Q5VU36 1347 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 ZBED9Q6R2W3 1325 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 SPATA31A7Q8IWB4 1347 aa7.7□□□□□ -1.18
EPHA4-212ENST00000472696 ONECUT3O60422 494 aaPredicted RBP7.69□□□□□ -1.18
EPHA4-212ENST00000472696 PLEKHG5O94827 1062 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 HMOX1P09601 288 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 TMPOP42166 694 aaKnown RBP7.69□□□□□ -1.18
EPHA4-212ENST00000472696 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
EPHA4-212ENST00000472696 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 STRN4Q9NRL3 753 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 RGPD2P0DJD1 1756 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 OVOS2A0A0G2JMS6 1433 aa7.69□□□□□ -1.18
EPHA4-212ENST00000472696 APAF1O14727 1248 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 HNRNPUQ00839 825 aaKnown RBP eCLIP7.68□□□□□ -1.18
EPHA4-212ENST00000472696 C1orf141Q5JVX7 400 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
EPHA4-212ENST00000472696 GJD4Q96KN9 370 aaPredicted RBP7.68□□□□□ -1.18
EPHA4-212ENST00000472696 PKD1L3Q7Z443 1732 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 AFF2P51816 1311 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 IL16Q14005 1332 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 PCDH11XQ9BZA7 1347 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 PCDH11YQ9BZA8 1340 aa7.68□□□□□ -1.18
EPHA4-212ENST00000472696 GNAT3A8MTJ3 354 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 EXOC5O00471 708 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 RIPK4P57078 832 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 NKX1-1Q15270 411 aaPredicted RBP7.67□□□□□ -1.18
EPHA4-212ENST00000472696 AEBP1Q8IUX7 1158 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 ZCRB1Q8TBF4 217 aaKnown RBP7.67□□□□□ -1.18
EPHA4-212ENST00000472696 DISP2A7MBM2 1401 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 ATRNO75882 1429 aa7.67□□□□□ -1.18
EPHA4-212ENST00000472696 WNK3Q9BYP7 1800 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 MTHFSDQ2M296 383 aaKnown RBP7.66□□□□□ -1.18
EPHA4-212ENST00000472696 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 CCDC146Q8IYE0 955 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 DCAF5Q96JK2 942 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 PHACTR3Q96KR7 559 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 ZNF521Q96K83 1311 aa7.66□□□□□ -1.18
EPHA4-212ENST00000472696 BCL9O00512 1426 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 MEGF6O75095 1541 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 HMGB2P26583 209 aaKnown RBP7.65□□□□□ -1.18
EPHA4-212ENST00000472696 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
EPHA4-212ENST00000472696 GOLGA2Q08379 1002 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 DDB1Q16531 1140 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 TNS2Q63HR2 1409 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 MAP3K5Q99683 1374 aa7.65□□□□□ -1.18
EPHA4-212ENST00000472696 QTRT2Q9H974 415 aaKnown RBP7.65□□□□□ -1.18
EPHA4-212ENST00000472696 CCDC9Q9Y3X0 531 aaKnown RBP7.65□□□□□ -1.18
EPHA4-212ENST00000472696 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 ADAMTS7Q9UKP4 1686 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 CEMIPQ8WUJ3 1361 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
EPHA4-212ENST00000472696 ERVV-2B6SEH9 535 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 E9PSI1 815 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 CT47B1P0C2W7 299 aaPredicted RBP7.64□□□□□ -1.19
EPHA4-212ENST00000472696 PHKG2P15735 406 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 GNAI1P63096 354 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 ZNF530Q6P9A1 599 aaPredicted RBP7.64□□□□□ -1.19
EPHA4-212ENST00000472696 USHBP1Q8N6Y0 703 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 TRIM35Q9UPQ4 493 aa7.64□□□□□ -1.19
EPHA4-212ENST00000472696 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 CFAP44Q96MT7 982 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 MYH16Q9H6N6 1097 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 IFT57Q9NWB7 429 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 THSD7AQ9UPZ6 1657 aa7.63□□□□□ -1.19
EPHA4-212ENST00000472696 SCN11AQ9UI33 1791 aa7.62□□□□□ -1.19
EPHA4-212ENST00000472696 CYP27B1O15528 508 aa7.62□□□□□ -1.19
EPHA4-212ENST00000472696 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
EPHA4-212ENST00000472696 CENPBP07199 599 aaPredicted RBP7.62□□□□□ -1.19
EPHA4-212ENST00000472696 RXRBP28702 533 aa7.62□□□□□ -1.19
EPHA4-212ENST00000472696 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
EPHA4-212ENST00000472696 NEUROD2Q15784 382 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms