RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
SMURF1-203ENST00000472627 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
SMURF1-203ENST00000472627 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
SMURF1-203ENST00000472627 KCNQ4P56696 695 aa19.85■□□□□ 0.77
SMURF1-203ENST00000472627 IP6K1Q92551 441 aa19.85■□□□□ 0.77
SMURF1-203ENST00000472627 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
SMURF1-203ENST00000472627 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
SMURF1-203ENST00000472627 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
SMURF1-203ENST00000472627 LTV1Q96GA3 475 aaPredicted RBP19.84■□□□□ 0.77
SMURF1-203ENST00000472627 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
SMURF1-203ENST00000472627 LY75O60449 1722 aa19.84■□□□□ 0.77
SMURF1-203ENST00000472627 DOT1LQ8TEK3 1739 aa19.83■□□□□ 0.77
SMURF1-203ENST00000472627 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
SMURF1-203ENST00000472627 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
SMURF1-203ENST00000472627 ZCRB1Q8TBF4 217 aaKnown RBP19.82■□□□□ 0.76
SMURF1-203ENST00000472627 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
SMURF1-203ENST00000472627 ADCY9O60503 1353 aa19.8■□□□□ 0.76
SMURF1-203ENST00000472627 NSD2O96028 1365 aa19.8■□□□□ 0.76
SMURF1-203ENST00000472627 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
SMURF1-203ENST00000472627 AMPHP49418 695 aa19.78■□□□□ 0.76
SMURF1-203ENST00000472627 CD163L1Q9NR16 1453 aa19.78■□□□□ 0.76
SMURF1-203ENST00000472627 COG3Q96JB2 828 aa19.76■□□□□ 0.75
SMURF1-203ENST00000472627 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
SMURF1-203ENST00000472627 APLP1P51693 650 aa19.75■□□□□ 0.75
SMURF1-203ENST00000472627 RAPGEF4Q8WZA2 1011 aa19.75■□□□□ 0.75
SMURF1-203ENST00000472627 A0A1W2PP64 1363 aa19.74■□□□□ 0.75
SMURF1-203ENST00000472627 HOXC9P31274 260 aa19.74■□□□□ 0.75
SMURF1-203ENST00000472627 AK7Q96M32 723 aa19.74■□□□□ 0.75
SMURF1-203ENST00000472627 SLC12A5Q9H2X9 1139 aa19.74■□□□□ 0.75
SMURF1-203ENST00000472627 SMG6Q86US8 1419 aaKnown RBP19.74■□□□□ 0.75
SMURF1-203ENST00000472627 C5P01031 1676 aa19.73■□□□□ 0.75
SMURF1-203ENST00000472627 IGSF1Q8N6C5 1336 aa19.73■□□□□ 0.75
SMURF1-203ENST00000472627 MEGF6O75095 1541 aa19.72■□□□□ 0.75
SMURF1-203ENST00000472627 MAP3K19Q56UN5 1328 aa19.72■□□□□ 0.75
SMURF1-203ENST00000472627 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
SMURF1-203ENST00000472627 PALLDQ8WX93 1383 aa19.71■□□□□ 0.75
SMURF1-203ENST00000472627 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
SMURF1-203ENST00000472627 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
SMURF1-203ENST00000472627 CARD11Q9BXL7 1154 aa19.71■□□□□ 0.75
SMURF1-203ENST00000472627 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
SMURF1-203ENST00000472627 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
SMURF1-203ENST00000472627 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
SMURF1-203ENST00000472627 KIF3CO14782 793 aa19.68■□□□□ 0.74
SMURF1-203ENST00000472627 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
SMURF1-203ENST00000472627 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
SMURF1-203ENST00000472627 TOMM70O94826 608 aa19.66■□□□□ 0.74
SMURF1-203ENST00000472627 PHF14O94880 888 aa19.66■□□□□ 0.74
SMURF1-203ENST00000472627 SLC24A1O60721 1099 aa19.65■□□□□ 0.74
SMURF1-203ENST00000472627 SSFA2P28290 1259 aa19.65■□□□□ 0.74
SMURF1-203ENST00000472627 WWC3Q9ULE0 1092 aa19.65■□□□□ 0.74
SMURF1-203ENST00000472627 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
SMURF1-203ENST00000472627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
SMURF1-203ENST00000472627 NBPF6Q5VWK0 638 aa19.64■□□□□ 0.73
SMURF1-203ENST00000472627 NBPF4Q96M43 638 aa19.64■□□□□ 0.73
SMURF1-203ENST00000472627 SIN3AQ96ST3 1273 aa19.64■□□□□ 0.73
SMURF1-203ENST00000472627 TAF1LQ8IZX4 1826 aa19.62■□□□□ 0.73
SMURF1-203ENST00000472627 USHBP1Q8N6Y0 703 aa19.62■□□□□ 0.73
SMURF1-203ENST00000472627 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
SMURF1-203ENST00000472627 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
SMURF1-203ENST00000472627 C16orf71Q8IYS4 520 aaPredicted RBP19.6■□□□□ 0.73
SMURF1-203ENST00000472627 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
SMURF1-203ENST00000472627 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
SMURF1-203ENST00000472627 TGFB2P61812 414 aa19.57■□□□□ 0.72
SMURF1-203ENST00000472627 BCS1LQ9Y276 419 aa19.57■□□□□ 0.72
SMURF1-203ENST00000472627 INSRP06213 1382 aa19.57■□□□□ 0.72
SMURF1-203ENST00000472627 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
SMURF1-203ENST00000472627 LOC102724428A0A0B4J2F2 783 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 GNPATO15228 680 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 FBLN1P23142 703 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 SIK1P57059 783 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 DNAJC5GQ8N7S2 189 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 FLT4P35916 1363 aa19.56■□□□□ 0.72
SMURF1-203ENST00000472627 CYP27B1O15528 508 aa19.55■□□□□ 0.72
SMURF1-203ENST00000472627 MMP10P09238 476 aa19.55■□□□□ 0.72
SMURF1-203ENST00000472627 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
SMURF1-203ENST00000472627 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
SMURF1-203ENST00000472627 TOGARAM1Q9Y4F4 1720 aa19.55■□□□□ 0.72
SMURF1-203ENST00000472627 PLEKHG2Q9H7P9 1386 aa19.55■□□□□ 0.72
SMURF1-203ENST00000472627 ARHGAP27Q6ZUM4 889 aa19.54■□□□□ 0.72
SMURF1-203ENST00000472627 PIGBQ92521 554 aa19.54■□□□□ 0.72
SMURF1-203ENST00000472627 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
SMURF1-203ENST00000472627 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
SMURF1-203ENST00000472627 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
SMURF1-203ENST00000472627 PXDNLA1KZ92 1463 aa19.53■□□□□ 0.72
SMURF1-203ENST00000472627 FSTL1Q12841 308 aa19.52■□□□□ 0.72
SMURF1-203ENST00000472627 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
SMURF1-203ENST00000472627 LINC00116Q8NCU8 138 aa19.52■□□□□ 0.72
SMURF1-203ENST00000472627 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
SMURF1-203ENST00000472627 ITGB4P16144 1822 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 ATP6V1AP38606 617 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 NMRK2Q9NPI5 230 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
SMURF1-203ENST00000472627 FYB1O15117 783 aa19.5■□□□□ 0.71
SMURF1-203ENST00000472627 FCHSD2O94868 740 aa19.5■□□□□ 0.71
SMURF1-203ENST00000472627 NKX1-1Q15270 411 aaPredicted RBP19.5■□□□□ 0.71
SMURF1-203ENST00000472627 RTCBQ9Y3I0 505 aaKnown RBP19.5■□□□□ 0.71
SMURF1-203ENST00000472627 TMF1P82094 1093 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms