RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 GAS2L2Q8NHY3 880 aa29.34■■■□□ 2.29
PAXBP1-208ENST00000472588 TATP17735 454 aaPredicted RBP29.33■■■□□ 2.29
PAXBP1-208ENST00000472588 NEUROD2Q15784 382 aa29.32■■■□□ 2.28
PAXBP1-208ENST00000472588 PLEKHO1Q53GL0 409 aaPredicted RBP29.32■■■□□ 2.28
PAXBP1-208ENST00000472588 SALL2Q9Y467 1007 aaPredicted RBP29.32■■■□□ 2.28
PAXBP1-208ENST00000472588 RIPK4P57078 832 aa29.31■■■□□ 2.28
PAXBP1-208ENST00000472588 RBM6P78332 1123 aaKnown RBP29.31■■■□□ 2.28
PAXBP1-208ENST00000472588 LMOD3Q0VAK6 560 aa29.31■■■□□ 2.28
PAXBP1-208ENST00000472588 RRP7AQ9Y3A4 280 aaKnown RBP29.3■■■□□ 2.28
PAXBP1-208ENST00000472588 PARP4Q9UKK3 1724 aaKnown RBP29.3■■■□□ 2.28
PAXBP1-208ENST00000472588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.29■■■□□ 2.284e-8■■■□□ 19.2
PAXBP1-208ENST00000472588 SENP3-EIF4A1A0A087X0R7 540 aa29.28■■■□□ 2.28
PAXBP1-208ENST00000472588 THRAP3Q9Y2W1 955 aaKnown RBP29.28■■■□□ 2.28
PAXBP1-208ENST00000472588 PDE3BQ13370 1112 aa29.28■■■□□ 2.28
PAXBP1-208ENST00000472588 MTHFSDQ2M296 383 aaKnown RBP29.28■■■□□ 2.28
PAXBP1-208ENST00000472588 GLI3P10071 1580 aa29.27■■■□□ 2.28
PAXBP1-208ENST00000472588 DLG5Q8TDM6 1919 aa29.27■■■□□ 2.28
PAXBP1-208ENST00000472588 IL2RBP14784 551 aa29.27■■■□□ 2.28
PAXBP1-208ENST00000472588 SPG7Q9UQ90 795 aa29.27■■■□□ 2.28
PAXBP1-208ENST00000472588 VPS72Q15906 364 aa29.26■■■□□ 2.27
PAXBP1-208ENST00000472588 WWC1Q8IX03 1113 aa29.26■■■□□ 2.27
PAXBP1-208ENST00000472588 GJD4Q96KN9 370 aaPredicted RBP29.26■■■□□ 2.27
PAXBP1-208ENST00000472588 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
PAXBP1-208ENST00000472588 USP35Q9P2H5 1018 aa29.25■■■□□ 2.27
PAXBP1-208ENST00000472588 SPATA31A1Q5TZJ5 1347 aa29.25■■■□□ 2.27
PAXBP1-208ENST00000472588 MEGF6O75095 1541 aa29.24■■■□□ 2.27
PAXBP1-208ENST00000472588 CDCA7Q9BWT1 371 aaPredicted RBP29.24■■■□□ 2.27
PAXBP1-208ENST00000472588 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
PAXBP1-208ENST00000472588 SPATA31A5Q5VU36 1347 aa29.24■■■□□ 2.27
PAXBP1-208ENST00000472588 SPATA31A7Q8IWB4 1347 aa29.24■■■□□ 2.27
PAXBP1-208ENST00000472588 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
PAXBP1-208ENST00000472588 ZNF521Q96K83 1311 aa29.23■■■□□ 2.27
PAXBP1-208ENST00000472588 OVOS2A0A0G2JMS6 1433 aa29.23■■■□□ 2.27
PAXBP1-208ENST00000472588 WDR63Q8IWG1 891 aa29.22■■■□□ 2.27
PAXBP1-208ENST00000472588 RTF1Q92541 710 aaKnown RBP29.22■■■□□ 2.27
PAXBP1-208ENST00000472588 RGS12O14924 1447 aa29.22■■■□□ 2.27
PAXBP1-208ENST00000472588 CALD1Q05682 793 aaKnown RBP29.21■■■□□ 2.27
PAXBP1-208ENST00000472588 TRIM35Q9UPQ4 493 aa29.21■■■□□ 2.27
PAXBP1-208ENST00000472588 PKD1L3Q7Z443 1732 aa29.21■■■□□ 2.27
PAXBP1-208ENST00000472588 GNAT3A8MTJ3 354 aa29.2■■■□□ 2.27
PAXBP1-208ENST00000472588 GOLGA2Q08379 1002 aa29.2■■■□□ 2.27
PAXBP1-208ENST00000472588 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.27
PAXBP1-208ENST00000472588 AKAP4Q5JQC9 854 aa29.2■■■□□ 2.26
PAXBP1-208ENST00000472588 WNK3Q9BYP7 1800 aa29.19■■■□□ 2.26
PAXBP1-208ENST00000472588 MAP3K5Q99683 1374 aa29.19■■■□□ 2.26
PAXBP1-208ENST00000472588 ZNF530Q6P9A1 599 aaPredicted RBP29.19■■■□□ 2.26
PAXBP1-208ENST00000472588 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
PAXBP1-208ENST00000472588 ZCRB1Q8TBF4 217 aaKnown RBP29.17■■■□□ 2.26
PAXBP1-208ENST00000472588 DISP2A7MBM2 1401 aa29.16■■■□□ 2.26
PAXBP1-208ENST00000472588 IFNL2Q8IZJ0 200 aa29.15■■■□□ 2.26
PAXBP1-208ENST00000472588 IL16Q14005 1332 aa29.14■■■□□ 2.26
PAXBP1-208ENST00000472588 PCDH11XQ9BZA7 1347 aa29.14■■■□□ 2.26
PAXBP1-208ENST00000472588 PCDH11YQ9BZA8 1340 aa29.14■■■□□ 2.26
PAXBP1-208ENST00000472588 E9PSI1 815 aa29.12■■■□□ 2.25
PAXBP1-208ENST00000472588 HSP90AB1P08238 724 aaKnown RBP29.12■■■□□ 2.25
PAXBP1-208ENST00000472588 SOCS7O14512 581 aa29.11■■■□□ 2.25
PAXBP1-208ENST00000472588 EXOC5O00471 708 aa29.11■■■□□ 2.25
PAXBP1-208ENST00000472588 PHKG2P15735 406 aa29.1■■■□□ 2.25
PAXBP1-208ENST00000472588 BRWD3Q6RI45 1802 aa29.09■■■□□ 2.25
PAXBP1-208ENST00000472588 SLFN5Q08AF3 891 aa29.09■■■□□ 2.25
PAXBP1-208ENST00000472588 MCM10Q7L590 875 aa29.08■■■□□ 2.25
PAXBP1-208ENST00000472588 MYH16Q9H6N6 1097 aa29.08■■■□□ 2.25
PAXBP1-208ENST00000472588 FAM98CQ17RN3 349 aaKnown RBP29.07■■■□□ 2.24
PAXBP1-208ENST00000472588 CDCA7LQ96GN5 454 aa29.07■■■□□ 2.24
PAXBP1-208ENST00000472588 CYP27B1O15528 508 aa29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 ONECUT3O60422 494 aaPredicted RBP29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 GNAI1P63096 354 aa29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 DCTN1Q14203 1278 aa29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 DDB1Q16531 1140 aa29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 VIRMAQ69YN4 1812 aaKnown RBP29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 SHANK3Q9BYB0 1731 aa29.06■■■□□ 2.24
PAXBP1-208ENST00000472588 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 TNS2Q63HR2 1409 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 IL17REQ8NFR9 667 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 DCAF5Q96JK2 942 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 IFT57Q9NWB7 429 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 CEMIPQ8WUJ3 1361 aa29.05■■■□□ 2.24
PAXBP1-208ENST00000472588 SEPT12Q8IYM1 358 aa29.04■■■□□ 2.24
PAXBP1-208ENST00000472588 THUMPD2Q9BTF0 503 aaKnown RBP29.04■■■□□ 2.24
PAXBP1-208ENST00000472588 LRRC37A3O60309 1634 aa29.04■■■□□ 2.24
PAXBP1-208ENST00000472588 MPRIPQ6WCQ1 1025 aa29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 TRMT2AQ8IZ69 625 aaKnown RBP29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 DDX54Q8TDD1 881 aaKnown RBP29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 CFAP44Q96MT7 982 aa29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 ADAMTS7Q9UKP4 1686 aa29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 A0A0G2JS52 829 aa29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 RNMTO43148 476 aaKnown RBP29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 MYT1Q01538 1121 aa29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 NKX1-1Q15270 411 aaPredicted RBP29.03■■■□□ 2.24
PAXBP1-208ENST00000472588 SCN11AQ9UI33 1791 aa29.02■■■□□ 2.24
PAXBP1-208ENST00000472588 TEFQ10587 303 aa29.01■■■□□ 2.23
PAXBP1-208ENST00000472588 BABAM1Q9NWV8 329 aa29.01■■■□□ 2.23
PAXBP1-208ENST00000472588 DUSP27Q5VZP5 1158 aa29■■■□□ 2.23
PAXBP1-208ENST00000472588 LGR6Q9HBX8 967 aa29■■■□□ 2.23
PAXBP1-208ENST00000472588 SPINK5Q9NQ38 1064 aaPredicted RBP29■■■□□ 2.23
PAXBP1-208ENST00000472588 LAS1LQ9Y4W2 734 aaKnown RBP29■■■□□ 2.23
PAXBP1-208ENST00000472588 ZNF853P0CG23 659 aa28.99■■■□□ 2.23
PAXBP1-208ENST00000472588 TAF7Q15545 349 aaPredicted RBP28.98■■■□□ 2.23
PAXBP1-208ENST00000472588 KDM6AO15550 1401 aaPredicted RBP28.96■■■□□ 2.23
PAXBP1-208ENST00000472588 CHL1O00533 1208 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms