RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 WWC3Q9ULE0 1092 aa14.25□□□□□ -0.13
SCAMP3-205ENST00000472397 RGPD2P0DJD1 1756 aa14.24□□□□□ -0.13
SCAMP3-205ENST00000472397 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
SCAMP3-205ENST00000472397 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
SCAMP3-205ENST00000472397 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
SCAMP3-205ENST00000472397 POLD1P28340 1107 aa14.23□□□□□ -0.13
SCAMP3-205ENST00000472397 TESK2Q96S53 571 aa14.23□□□□□ -0.13
SCAMP3-205ENST00000472397 CCNL1Q9UK58 526 aaPredicted RBP14.23□□□□□ -0.13
SCAMP3-205ENST00000472397 MEGF6O75095 1541 aa14.23□□□□□ -0.13
SCAMP3-205ENST00000472397 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
SCAMP3-205ENST00000472397 NSD2O96028 1365 aa14.22□□□□□ -0.13
SCAMP3-205ENST00000472397 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.13
SCAMP3-205ENST00000472397 USP54Q70EL1 1684 aa14.21□□□□□ -0.13
SCAMP3-205ENST00000472397 HSP90AB2PQ58FF8 381 aa14.2□□□□□ -0.14
SCAMP3-205ENST00000472397 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
SCAMP3-205ENST00000472397 ANKRD36BQ8N2N9 1353 aa14.2□□□□□ -0.14
SCAMP3-205ENST00000472397 C1QTNF8P60827 252 aa14.19□□□□□ -0.14
SCAMP3-205ENST00000472397 TUBGCP6Q96RT7 1819 aa14.19□□□□□ -0.14
SCAMP3-205ENST00000472397 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
SCAMP3-205ENST00000472397 FYB1O15117 783 aa14.18□□□□□ -0.14
SCAMP3-205ENST00000472397 YBX3P16989 372 aaKnown RBP eCLIP14.18□□□□□ -0.148e-7■■■□□ 16.9
SCAMP3-205ENST00000472397 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
SCAMP3-205ENST00000472397 UTRNP46939 3433 aa14.17□□□□□ -0.14
SCAMP3-205ENST00000472397 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
SCAMP3-205ENST00000472397 TATP17735 454 aaPredicted RBP14.17□□□□□ -0.14
SCAMP3-205ENST00000472397 SLC16A10Q8TF71 515 aa14.17□□□□□ -0.14
SCAMP3-205ENST00000472397 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
SCAMP3-205ENST00000472397 SHANK3Q9BYB0 1731 aa14.16□□□□□ -0.14
SCAMP3-205ENST00000472397 PHF14O94880 888 aa14.16□□□□□ -0.14
SCAMP3-205ENST00000472397 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
SCAMP3-205ENST00000472397 POLR3GLQ9BT43 218 aa14.16□□□□□ -0.14
SCAMP3-205ENST00000472397 USP47Q96K76 1375 aa14.16□□□□□ -0.14
SCAMP3-205ENST00000472397 ZNF526Q8TF50 670 aaPredicted RBP14.15□□□□□ -0.14
SCAMP3-205ENST00000472397 CHD4Q14839 1912 aa14.15□□□□□ -0.14
SCAMP3-205ENST00000472397 GIGYF1O75420 1035 aaPredicted RBP14.14□□□□□ -0.15
SCAMP3-205ENST00000472397 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
SCAMP3-205ENST00000472397 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
SCAMP3-205ENST00000472397 TMF1P82094 1093 aa14.13□□□□□ -0.15
SCAMP3-205ENST00000472397 PUS7Q96PZ0 661 aaKnown RBP14.13□□□□□ -0.15
SCAMP3-205ENST00000472397 CYP27B1O15528 508 aa14.12□□□□□ -0.15
SCAMP3-205ENST00000472397 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
SCAMP3-205ENST00000472397 LY75O60449 1722 aa14.12□□□□□ -0.15
SCAMP3-205ENST00000472397 PALLDQ8WX93 1383 aa14.11□□□□□ -0.15
SCAMP3-205ENST00000472397 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
SCAMP3-205ENST00000472397 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
SCAMP3-205ENST00000472397 ADRA2BP18089 450 aa14.09□□□□□ -0.15
SCAMP3-205ENST00000472397 PIGBQ92521 554 aa14.09□□□□□ -0.15
SCAMP3-205ENST00000472397 AK7Q96M32 723 aa14.09□□□□□ -0.15
SCAMP3-205ENST00000472397 QSER1Q2KHR3 1735 aa14.09□□□□□ -0.15
SCAMP3-205ENST00000472397 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
SCAMP3-205ENST00000472397 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
SCAMP3-205ENST00000472397 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
SCAMP3-205ENST00000472397 INSRP06213 1382 aa14.08□□□□□ -0.16
SCAMP3-205ENST00000472397 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
SCAMP3-205ENST00000472397 GRIN3BO60391 1043 aa14.07□□□□□ -0.16
SCAMP3-205ENST00000472397 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
SCAMP3-205ENST00000472397 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
SCAMP3-205ENST00000472397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 C5P01031 1676 aa14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 COL24A1Q17RW2 1714 aa14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 FLT4P35916 1363 aa14.06□□□□□ -0.16
SCAMP3-205ENST00000472397 ITPK1Q13572 414 aa14.05□□□□□ -0.16
SCAMP3-205ENST00000472397 EYA1Q99502 592 aa14.05□□□□□ -0.16
SCAMP3-205ENST00000472397 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
SCAMP3-205ENST00000472397 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
SCAMP3-205ENST00000472397 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
SCAMP3-205ENST00000472397 GOLGB1Q14789 3259 aaKnown RBP14.03□□□□□ -0.16
SCAMP3-205ENST00000472397 GNPATO15228 680 aa14.03□□□□□ -0.16
SCAMP3-205ENST00000472397 TMOD3Q9NYL9 352 aa14.03□□□□□ -0.16
SCAMP3-205ENST00000472397 C4BP0C0L5 1744 aa14.03□□□□□ -0.16
SCAMP3-205ENST00000472397 ITGB4P16144 1822 aa14.02□□□□□ -0.16
SCAMP3-205ENST00000472397 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 SIK1P57059 783 aa14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 SPG7Q9UQ90 795 aa14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
SCAMP3-205ENST00000472397 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
SCAMP3-205ENST00000472397 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
SCAMP3-205ENST00000472397 ATG3Q9NT62 314 aa14.01□□□□□ -0.17
SCAMP3-205ENST00000472397 TAF1LQ8IZX4 1826 aa14.01□□□□□ -0.17
SCAMP3-205ENST00000472397 PHKG2P15735 406 aa14□□□□□ -0.17
SCAMP3-205ENST00000472397 PCGF6Q9BYE7 350 aa14□□□□□ -0.17
SCAMP3-205ENST00000472397 POLKQ9UBT6 870 aa14□□□□□ -0.17
SCAMP3-205ENST00000472397 MMP10P09238 476 aa13.99□□□□□ -0.17
SCAMP3-205ENST00000472397 EIF4A2Q14240 407 aaKnown RBP13.99□□□□□ -0.17
SCAMP3-205ENST00000472397 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
SCAMP3-205ENST00000472397 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
SCAMP3-205ENST00000472397 NKX1-1Q15270 411 aaPredicted RBP13.98□□□□□ -0.17
SCAMP3-205ENST00000472397 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
SCAMP3-205ENST00000472397 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
SCAMP3-205ENST00000472397 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
SCAMP3-205ENST00000472397 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
SCAMP3-205ENST00000472397 PKD1L3Q7Z443 1732 aa13.96□□□□□ -0.17
SCAMP3-205ENST00000472397 UBR3Q6ZT12 1888 aa13.96□□□□□ -0.17
SCAMP3-205ENST00000472397 SSFA2P28290 1259 aa13.96□□□□□ -0.17
SCAMP3-205ENST00000472397 BCS1LQ9Y276 419 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 350.3 ms