RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
SMC4-213ENST00000472282 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
SMC4-213ENST00000472282 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
SMC4-213ENST00000472282 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
SMC4-213ENST00000472282 SLIT3O75094 1523 aa12.94□□□□□ -0.34
SMC4-213ENST00000472282 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
SMC4-213ENST00000472282 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
SMC4-213ENST00000472282 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
SMC4-213ENST00000472282 A0A0G2JS52 829 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 MYT1Q01538 1121 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 FAM182BQ5T319 152 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
SMC4-213ENST00000472282 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
SMC4-213ENST00000472282 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
SMC4-213ENST00000472282 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
SMC4-213ENST00000472282 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
SMC4-213ENST00000472282 CPDO75976 1380 aa12.91□□□□□ -0.34
SMC4-213ENST00000472282 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
SMC4-213ENST00000472282 GCP02774 474 aa12.9□□□□□ -0.34
SMC4-213ENST00000472282 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
SMC4-213ENST00000472282 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
SMC4-213ENST00000472282 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
SMC4-213ENST00000472282 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
SMC4-213ENST00000472282 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
SMC4-213ENST00000472282 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
SMC4-213ENST00000472282 LARP1Q6PKG0 1096 aaKnown RBP12.89□□□□□ -0.35
SMC4-213ENST00000472282 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
SMC4-213ENST00000472282 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
SMC4-213ENST00000472282 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
SMC4-213ENST00000472282 LTN1O94822 1766 aa12.89□□□□□ -0.35
SMC4-213ENST00000472282 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
SMC4-213ENST00000472282 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
SMC4-213ENST00000472282 NLRP6P59044 892 aa12.88□□□□□ -0.35
SMC4-213ENST00000472282 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
SMC4-213ENST00000472282 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
SMC4-213ENST00000472282 ZBTB7CA1YPR0 619 aa12.87□□□□□ -0.35
SMC4-213ENST00000472282 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
SMC4-213ENST00000472282 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
SMC4-213ENST00000472282 NFAT5O94916 1531 aa12.87□□□□□ -0.35
SMC4-213ENST00000472282 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
SMC4-213ENST00000472282 USP47Q96K76 1375 aa12.86□□□□□ -0.35
SMC4-213ENST00000472282 EVA1CP58658 441 aa12.86□□□□□ -0.35
SMC4-213ENST00000472282 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SMC4-213ENST00000472282 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
SMC4-213ENST00000472282 RREB1Q92766 1687 aa12.84□□□□□ -0.35
SMC4-213ENST00000472282 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
SMC4-213ENST00000472282 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
SMC4-213ENST00000472282 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
SMC4-213ENST00000472282 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
SMC4-213ENST00000472282 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
SMC4-213ENST00000472282 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
SMC4-213ENST00000472282 CRB1P82279 1406 aa12.83□□□□□ -0.36
SMC4-213ENST00000472282 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
SMC4-213ENST00000472282 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
SMC4-213ENST00000472282 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
SMC4-213ENST00000472282 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
SMC4-213ENST00000472282 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
SMC4-213ENST00000472282 TRIM37O94972 964 aa12.81□□□□□ -0.36
SMC4-213ENST00000472282 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
SMC4-213ENST00000472282 BAG6P46379 1132 aa12.81□□□□□ -0.36
SMC4-213ENST00000472282 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
SMC4-213ENST00000472282 TESK2Q96S53 571 aa12.81□□□□□ -0.36
SMC4-213ENST00000472282 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
SMC4-213ENST00000472282 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 NME9Q86XW9 330 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.366e-65■■■■■ 143.5
SMC4-213ENST00000472282 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 LRP5O75197 1615 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
SMC4-213ENST00000472282 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
SMC4-213ENST00000472282 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
SMC4-213ENST00000472282 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
SMC4-213ENST00000472282 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
SMC4-213ENST00000472282 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
SMC4-213ENST00000472282 MYOM1P52179 1685 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 FAM196AQ6ZSG2 479 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
SMC4-213ENST00000472282 WDR17Q8IZU2 1322 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 ABCC6O95255 1503 aa12.78□□□□□ -0.36
SMC4-213ENST00000472282 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
SMC4-213ENST00000472282 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
SMC4-213ENST00000472282 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
SMC4-213ENST00000472282 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
SMC4-213ENST00000472282 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
SMC4-213ENST00000472282 STK25O00506 426 aa12.76□□□□□ -0.37
SMC4-213ENST00000472282 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
SMC4-213ENST00000472282 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMC4-213ENST00000472282 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
SMC4-213ENST00000472282 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms