RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 YY1P25490 414 aa13.73□□□□□ -0.21
NUDCD3-205ENST00000472246 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
NUDCD3-205ENST00000472246 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
NUDCD3-205ENST00000472246 TUBGCP6Q96RT7 1819 aa13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 KCNQ4P56696 695 aa13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 SGIP1Q9BQI5 828 aa13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 LY75O60449 1722 aa13.72□□□□□ -0.21
NUDCD3-205ENST00000472246 QSER1Q2KHR3 1735 aa13.71□□□□□ -0.21
NUDCD3-205ENST00000472246 CDCA8Q53HL2 280 aa13.71□□□□□ -0.21
NUDCD3-205ENST00000472246 CARD14Q9BXL6 1004 aa13.71□□□□□ -0.21
NUDCD3-205ENST00000472246 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-205ENST00000472246 INSRP06213 1382 aa13.71□□□□□ -0.22
NUDCD3-205ENST00000472246 FLT4P35916 1363 aa13.71□□□□□ -0.22
NUDCD3-205ENST00000472246 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
NUDCD3-205ENST00000472246 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
NUDCD3-205ENST00000472246 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
NUDCD3-205ENST00000472246 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
NUDCD3-205ENST00000472246 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
NUDCD3-205ENST00000472246 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
NUDCD3-205ENST00000472246 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
NUDCD3-205ENST00000472246 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
NUDCD3-205ENST00000472246 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-205ENST00000472246 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
NUDCD3-205ENST00000472246 KIF24Q5T7B8 1368 aa13.68□□□□□ -0.22
NUDCD3-205ENST00000472246 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
NUDCD3-205ENST00000472246 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
NUDCD3-205ENST00000472246 ARXQ96QS3 562 aa13.67□□□□□ -0.22
NUDCD3-205ENST00000472246 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
NUDCD3-205ENST00000472246 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-205ENST00000472246 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
NUDCD3-205ENST00000472246 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
NUDCD3-205ENST00000472246 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
NUDCD3-205ENST00000472246 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
NUDCD3-205ENST00000472246 COL24A1Q17RW2 1714 aa13.65□□□□□ -0.22
NUDCD3-205ENST00000472246 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
NUDCD3-205ENST00000472246 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 C5P01031 1676 aa13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 CYP27B1O15528 508 aa13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
NUDCD3-205ENST00000472246 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
NUDCD3-205ENST00000472246 ITGB4P16144 1822 aa13.63□□□□□ -0.23
NUDCD3-205ENST00000472246 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
NUDCD3-205ENST00000472246 SLC16A10Q8TF71 515 aa13.63□□□□□ -0.23
NUDCD3-205ENST00000472246 TAF1LQ8IZX4 1826 aa13.62□□□□□ -0.23
NUDCD3-205ENST00000472246 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
NUDCD3-205ENST00000472246 POLD1P28340 1107 aa13.61□□□□□ -0.23
NUDCD3-205ENST00000472246 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
NUDCD3-205ENST00000472246 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-205ENST00000472246 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
NUDCD3-205ENST00000472246 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-205ENST00000472246 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-205ENST00000472246 CHD4Q14839 1912 aa13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 MSH5O43196 834 aa13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 EYA1Q99502 592 aa13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
NUDCD3-205ENST00000472246 MSL1Q68DK7 614 aa13.58□□□□□ -0.24
NUDCD3-205ENST00000472246 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
NUDCD3-205ENST00000472246 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUDCD3-205ENST00000472246 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-205ENST00000472246 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-205ENST00000472246 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
NUDCD3-205ENST00000472246 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
NUDCD3-205ENST00000472246 GPR162Q16538 588 aa13.56□□□□□ -0.24
NUDCD3-205ENST00000472246 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-205ENST00000472246 PIGBQ92521 554 aa13.56□□□□□ -0.24
NUDCD3-205ENST00000472246 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
NUDCD3-205ENST00000472246 SMIM5Q71RC9 77 aa13.55□□□□□ -0.24
NUDCD3-205ENST00000472246 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
NUDCD3-205ENST00000472246 SMARCC1Q92922 1105 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-205ENST00000472246 PANK3Q9H999 370 aa13.55□□□□□ -0.24
NUDCD3-205ENST00000472246 PHKG2P15735 406 aa13.54□□□□□ -0.24
NUDCD3-205ENST00000472246 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-205ENST00000472246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUDCD3-205ENST00000472246 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
NUDCD3-205ENST00000472246 AK7Q96M32 723 aa13.53□□□□□ -0.24
NUDCD3-205ENST00000472246 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
NUDCD3-205ENST00000472246 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
NUDCD3-205ENST00000472246 PHF14O94880 888 aa13.52□□□□□ -0.25
NUDCD3-205ENST00000472246 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
NUDCD3-205ENST00000472246 ASAP1Q9ULH1 1129 aa13.52□□□□□ -0.25
NUDCD3-205ENST00000472246 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
NUDCD3-205ENST00000472246 SIK1P57059 783 aa13.51□□□□□ -0.25
NUDCD3-205ENST00000472246 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
NUDCD3-205ENST00000472246 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
NUDCD3-205ENST00000472246 ITPK1Q13572 414 aa13.5□□□□□ -0.25
NUDCD3-205ENST00000472246 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
NUDCD3-205ENST00000472246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-205ENST00000472246 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
NUDCD3-205ENST00000472246 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
NUDCD3-205ENST00000472246 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-205ENST00000472246 KDRP35968 1356 aa13.48□□□□□ -0.25
NUDCD3-205ENST00000472246 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-205ENST00000472246 SSFA2P28290 1259 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms