RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 TSPYL6Q8N831 410 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 KDM2BQ8NHM5 1336 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 CHL1O00533 1208 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
GCFC2-208ENST00000472230 GNAT3A8MTJ3 354 aa23.42■■□□□ 1.34
GCFC2-208ENST00000472230 HAP1P54257 671 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-208ENST00000472230 MED1Q15648 1581 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-208ENST00000472230 CRB1P82279 1406 aa23.42■■□□□ 1.34
GCFC2-208ENST00000472230 TRIM27P14373 513 aa23.42■■□□□ 1.34
GCFC2-208ENST00000472230 MVPQ14764 893 aaKnown RBP23.42■■□□□ 1.34
GCFC2-208ENST00000472230 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
GCFC2-208ENST00000472230 BRPF1P55201 1214 aaPredicted RBP23.41■■□□□ 1.34
GCFC2-208ENST00000472230 RBM19Q9Y4C8 960 aaKnown RBP23.41■■□□□ 1.34
GCFC2-208ENST00000472230 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
GCFC2-208ENST00000472230 PXDNQ92626 1479 aa23.4■■□□□ 1.34
GCFC2-208ENST00000472230 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
GCFC2-208ENST00000472230 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.34
GCFC2-208ENST00000472230 BRINP3Q76B58 766 aa23.39■■□□□ 1.34
GCFC2-208ENST00000472230 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
GCFC2-208ENST00000472230 TCERG1O14776 1098 aaKnown RBP23.38■■□□□ 1.33
GCFC2-208ENST00000472230 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
GCFC2-208ENST00000472230 RGPD5Q99666 1765 aa23.38■■□□□ 1.33
GCFC2-208ENST00000472230 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
GCFC2-208ENST00000472230 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
GCFC2-208ENST00000472230 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
GCFC2-208ENST00000472230 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
GCFC2-208ENST00000472230 LRRC37A3O60309 1634 aa23.37■■□□□ 1.33
GCFC2-208ENST00000472230 ITPRIPQ8IWB1 547 aa23.36■■□□□ 1.33
GCFC2-208ENST00000472230 DDX19BQ9UMR2 479 aa23.36■■□□□ 1.33
GCFC2-208ENST00000472230 ARHGAP45Q92619 1136 aa23.34■■□□□ 1.33
GCFC2-208ENST00000472230 PLEKHO1Q53GL0 409 aaPredicted RBP23.34■■□□□ 1.33
GCFC2-208ENST00000472230 AXIN2Q9Y2T1 843 aa23.34■■□□□ 1.33
GCFC2-208ENST00000472230 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.33
GCFC2-208ENST00000472230 TMEM57Q8N5G2 664 aa23.33■■□□□ 1.32
GCFC2-208ENST00000472230 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.32
GCFC2-208ENST00000472230 CABLES1Q8TDN4 633 aa23.32■■□□□ 1.32
GCFC2-208ENST00000472230 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
GCFC2-208ENST00000472230 AMOTQ4VCS5 1084 aa23.31■■□□□ 1.32
GCFC2-208ENST00000472230 CRYBG1Q9Y4K1 1723 aa23.31■■□□□ 1.32
GCFC2-208ENST00000472230 IGHDP01880 384 aa23.3■■□□□ 1.32
GCFC2-208ENST00000472230 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
GCFC2-208ENST00000472230 IL17REQ8NFR9 667 aa23.3■■□□□ 1.32
GCFC2-208ENST00000472230 ERBB3P21860 1342 aa23.3■■□□□ 1.32
GCFC2-208ENST00000472230 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
GCFC2-208ENST00000472230 API5Q9BZZ5 524 aaKnown RBP23.29■■□□□ 1.32
GCFC2-208ENST00000472230 LMO7Q8WWI1 1683 aa23.29■■□□□ 1.32
GCFC2-208ENST00000472230 TAF7Q15545 349 aaPredicted RBP23.29■■□□□ 1.32
GCFC2-208ENST00000472230 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
GCFC2-208ENST00000472230 ABCC6O95255 1503 aa23.28■■□□□ 1.32
GCFC2-208ENST00000472230 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
GCFC2-208ENST00000472230 PCDHB15Q9Y5E8 787 aa23.28■■□□□ 1.32
GCFC2-208ENST00000472230 COL18A1P39060 1754 aa23.28■■□□□ 1.32
GCFC2-208ENST00000472230 AKAP4Q5JQC9 854 aa23.28■■□□□ 1.32
GCFC2-208ENST00000472230 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
GCFC2-208ENST00000472230 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
GCFC2-208ENST00000472230 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
GCFC2-208ENST00000472230 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
GCFC2-208ENST00000472230 FAM208AQ9UK61 1670 aaKnown RBP23.26■■□□□ 1.31
GCFC2-208ENST00000472230 NLRP2Q9NX02 1062 aa23.26■■□□□ 1.31
GCFC2-208ENST00000472230 CPDO75976 1380 aa23.25■■□□□ 1.31
GCFC2-208ENST00000472230 CHRNA2Q15822 529 aa23.24■■□□□ 1.31
GCFC2-208ENST00000472230 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
GCFC2-208ENST00000472230 CEMIPQ8WUJ3 1361 aa23.23■■□□□ 1.31
GCFC2-208ENST00000472230 ABCC4O15439 1325 aa23.23■■□□□ 1.31
GCFC2-208ENST00000472230 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
GCFC2-208ENST00000472230 TEFQ10587 303 aa23.22■■□□□ 1.31
GCFC2-208ENST00000472230 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
GCFC2-208ENST00000472230 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
GCFC2-208ENST00000472230 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
GCFC2-208ENST00000472230 LGR6Q9HBX8 967 aa23.21■■□□□ 1.31
GCFC2-208ENST00000472230 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
GCFC2-208ENST00000472230 TATP17735 454 aaPredicted RBP23.2■■□□□ 1.3
GCFC2-208ENST00000472230 PTPRCP08575 1304 aa23.2■■□□□ 1.3
GCFC2-208ENST00000472230 RGS3P49796 1198 aa23.2■■□□□ 1.3
GCFC2-208ENST00000472230 STK31Q9BXU1 1019 aa23.2■■□□□ 1.3
GCFC2-208ENST00000472230 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
GCFC2-208ENST00000472230 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
GCFC2-208ENST00000472230 PRDM11Q9NQV5 511 aa23.19■■□□□ 1.3
GCFC2-208ENST00000472230 RNMTO43148 476 aaKnown RBP23.18■■□□□ 1.3
GCFC2-208ENST00000472230 CCDC30Q5VVM6 783 aa23.18■■□□□ 1.3
GCFC2-208ENST00000472230 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
GCFC2-208ENST00000472230 PDE4AP27815 886 aa23.17■■□□□ 1.3
GCFC2-208ENST00000472230 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
GCFC2-208ENST00000472230 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
GCFC2-208ENST00000472230 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
GCFC2-208ENST00000472230 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
GCFC2-208ENST00000472230 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
GCFC2-208ENST00000472230 BTBD11A6QL63 1104 aa23.14■■□□□ 1.29
GCFC2-208ENST00000472230 CACNA1FO60840 1977 aa23.13■■□□□ 1.29
GCFC2-208ENST00000472230 INTS3Q68E01 1043 aaKnown RBP23.12■■□□□ 1.29
GCFC2-208ENST00000472230 CHMP4AQ9BY43 222 aa23.12■■□□□ 1.29
GCFC2-208ENST00000472230 BACH2Q9BYV9 841 aa23.12■■□□□ 1.29
GCFC2-208ENST00000472230 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
GCFC2-208ENST00000472230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.295e-7■■■■□ 21.1
GCFC2-208ENST00000472230 RGS12O14924 1447 aa23.12■■□□□ 1.29
GCFC2-208ENST00000472230 MEGF6O75095 1541 aa23.11■■□□□ 1.29
GCFC2-208ENST00000472230 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
GCFC2-208ENST00000472230 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms