RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
TSPAN1-205ENST00000472170 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
TSPAN1-205ENST00000472170 KCNQ2O43526 872 aa11.34□□□□□ -0.59
TSPAN1-205ENST00000472170 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
TSPAN1-205ENST00000472170 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-205ENST00000472170 TNS1Q9HBL0 1735 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-205ENST00000472170 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
TSPAN1-205ENST00000472170 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
TSPAN1-205ENST00000472170 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
TSPAN1-205ENST00000472170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
TSPAN1-205ENST00000472170 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
TSPAN1-205ENST00000472170 HSP90AB1P08238 724 aaKnown RBP11.32□□□□□ -0.6
TSPAN1-205ENST00000472170 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
TSPAN1-205ENST00000472170 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
TSPAN1-205ENST00000472170 EYA1Q99502 592 aa11.32□□□□□ -0.6
TSPAN1-205ENST00000472170 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 AMOTQ4VCS5 1084 aa11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 IFNL2Q8IZJ0 200 aa11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 SPON1Q9HCB6 807 aa11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 PEAK1Q9H792 1746 aa11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
TSPAN1-205ENST00000472170 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
TSPAN1-205ENST00000472170 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
TSPAN1-205ENST00000472170 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
TSPAN1-205ENST00000472170 LRP5O75197 1615 aa11.3□□□□□ -0.6
TSPAN1-205ENST00000472170 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 PTF1AQ7RTS3 328 aa11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
TSPAN1-205ENST00000472170 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-205ENST00000472170 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
TSPAN1-205ENST00000472170 MTHFSP49914 203 aa11.28□□□□□ -0.6
TSPAN1-205ENST00000472170 PROM2Q8N271 834 aa11.28□□□□□ -0.6
TSPAN1-205ENST00000472170 MEGF6O75095 1541 aa11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 TMOD3Q9NYL9 352 aa11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
TSPAN1-205ENST00000472170 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
TSPAN1-205ENST00000472170 SULT6B1Q6IMI4 303 aa11.26□□□□□ -0.61
TSPAN1-205ENST00000472170 RREB1Q92766 1687 aa11.26□□□□□ -0.61
TSPAN1-205ENST00000472170 PLEKHG2Q9H7P9 1386 aa11.26□□□□□ -0.61
TSPAN1-205ENST00000472170 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
TSPAN1-205ENST00000472170 CYP27B1O15528 508 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 MSH5O43196 834 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 DCAF5Q96JK2 942 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 BTAF1O14981 1849 aa11.25□□□□□ -0.61
TSPAN1-205ENST00000472170 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 NEFMP07197 916 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 PHKG2P15735 406 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 CABP4P57796 275 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
TSPAN1-205ENST00000472170 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
TSPAN1-205ENST00000472170 POLD1P28340 1107 aa11.23□□□□□ -0.61
TSPAN1-205ENST00000472170 IL13P35225 146 aa11.23□□□□□ -0.61
TSPAN1-205ENST00000472170 MTFR1LQ9H019 292 aa11.23□□□□□ -0.61
TSPAN1-205ENST00000472170 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
TSPAN1-205ENST00000472170 PIGBQ92521 554 aa11.22□□□□□ -0.61
TSPAN1-205ENST00000472170 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
TSPAN1-205ENST00000472170 YY1P25490 414 aa11.21□□□□□ -0.61
TSPAN1-205ENST00000472170 AK7Q96M32 723 aa11.21□□□□□ -0.61
TSPAN1-205ENST00000472170 ANO8Q9HCE9 1232 aaPredicted RBP11.21□□□□□ -0.61
TSPAN1-205ENST00000472170 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.62
TSPAN1-205ENST00000472170 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 HMOX1P09601 288 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
TSPAN1-205ENST00000472170 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
TSPAN1-205ENST00000472170 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
TSPAN1-205ENST00000472170 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
TSPAN1-205ENST00000472170 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 KCNQ4P56696 695 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 SIK1P57059 783 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
TSPAN1-205ENST00000472170 ITGB4P16144 1822 aa11.17□□□□□ -0.62
TSPAN1-205ENST00000472170 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
TSPAN1-205ENST00000472170 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
TSPAN1-205ENST00000472170 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
TSPAN1-205ENST00000472170 ARXQ96QS3 562 aa11.17□□□□□ -0.62
TSPAN1-205ENST00000472170 KDRP35968 1356 aa11.16□□□□□ -0.62
TSPAN1-205ENST00000472170 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
TSPAN1-205ENST00000472170 ZNF827Q17R98 1081 aa11.16□□□□□ -0.62
TSPAN1-205ENST00000472170 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
TSPAN1-205ENST00000472170 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
TSPAN1-205ENST00000472170 LY75O60449 1722 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms