RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
COL4A3-205ENST00000471862 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
COL4A3-205ENST00000471862 TXNRD1Q16881 649 aa15.94■□□□□ 0.14
COL4A3-205ENST00000471862 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
COL4A3-205ENST00000471862 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
COL4A3-205ENST00000471862 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
COL4A3-205ENST00000471862 ZCRB1Q8TBF4 217 aaKnown RBP15.92■□□□□ 0.14
COL4A3-205ENST00000471862 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
COL4A3-205ENST00000471862 PANK3Q9H999 370 aa15.91■□□□□ 0.14
COL4A3-205ENST00000471862 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
COL4A3-205ENST00000471862 NSD2O96028 1365 aa15.9■□□□□ 0.14
COL4A3-205ENST00000471862 POLKQ9UBT6 870 aa15.9■□□□□ 0.14
COL4A3-205ENST00000471862 LY75O60449 1722 aa15.89■□□□□ 0.13
COL4A3-205ENST00000471862 RAPGEF4Q8WZA2 1011 aa15.89■□□□□ 0.13
COL4A3-205ENST00000471862 TATP17735 454 aaPredicted RBP15.88■□□□□ 0.13
COL4A3-205ENST00000471862 SLC15A2Q16348 729 aa15.87■□□□□ 0.13
COL4A3-205ENST00000471862 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
COL4A3-205ENST00000471862 PPM1GO15355 546 aaPredicted RBP15.86■□□□□ 0.13
COL4A3-205ENST00000471862 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
COL4A3-205ENST00000471862 PDGFDQ9GZP0 370 aaPredicted RBP15.86■□□□□ 0.13
COL4A3-205ENST00000471862 SPON1Q9HCB6 807 aa15.86■□□□□ 0.13
COL4A3-205ENST00000471862 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
COL4A3-205ENST00000471862 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
COL4A3-205ENST00000471862 KIF7Q2M1P5 1343 aa15.86■□□□□ 0.13
COL4A3-205ENST00000471862 QSER1Q2KHR3 1735 aa15.85■□□□□ 0.13
COL4A3-205ENST00000471862 EYA1Q99502 592 aa15.85■□□□□ 0.13
COL4A3-205ENST00000471862 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
COL4A3-205ENST00000471862 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
COL4A3-205ENST00000471862 CYP27B1O15528 508 aa15.84■□□□□ 0.13
COL4A3-205ENST00000471862 ITGB4P16144 1822 aa15.84■□□□□ 0.13
COL4A3-205ENST00000471862 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
COL4A3-205ENST00000471862 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.12
COL4A3-205ENST00000471862 EIF4A2Q14240 407 aaKnown RBP15.83■□□□□ 0.12
COL4A3-205ENST00000471862 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
COL4A3-205ENST00000471862 ZNF827Q17R98 1081 aa15.82■□□□□ 0.12
COL4A3-205ENST00000471862 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
COL4A3-205ENST00000471862 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
COL4A3-205ENST00000471862 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
COL4A3-205ENST00000471862 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
COL4A3-205ENST00000471862 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
COL4A3-205ENST00000471862 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
COL4A3-205ENST00000471862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL4A3-205ENST00000471862 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
COL4A3-205ENST00000471862 ZBTB7AO95365 584 aa15.79■□□□□ 0.12
COL4A3-205ENST00000471862 PTGER2P43116 358 aa15.79■□□□□ 0.12
COL4A3-205ENST00000471862 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
COL4A3-205ENST00000471862 COL24A1Q17RW2 1714 aa15.79■□□□□ 0.12
COL4A3-205ENST00000471862 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
COL4A3-205ENST00000471862 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
COL4A3-205ENST00000471862 SGIP1Q9BQI5 828 aa15.78■□□□□ 0.12
COL4A3-205ENST00000471862 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
COL4A3-205ENST00000471862 KCNQ4P56696 695 aa15.77■□□□□ 0.12
COL4A3-205ENST00000471862 MTFR1LQ9H019 292 aa15.77■□□□□ 0.12
COL4A3-205ENST00000471862 C5P01031 1676 aa15.76■□□□□ 0.11
COL4A3-205ENST00000471862 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
COL4A3-205ENST00000471862 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
COL4A3-205ENST00000471862 PNPLA7Q6ZV29 1317 aa15.75■□□□□ 0.11
COL4A3-205ENST00000471862 PHKG2P15735 406 aa15.75■□□□□ 0.11
COL4A3-205ENST00000471862 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
COL4A3-205ENST00000471862 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
COL4A3-205ENST00000471862 MPRIPQ6WCQ1 1025 aa15.74■□□□□ 0.11
COL4A3-205ENST00000471862 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
COL4A3-205ENST00000471862 PIGBQ92521 554 aa15.73■□□□□ 0.11
COL4A3-205ENST00000471862 KDRP35968 1356 aa15.73■□□□□ 0.11
COL4A3-205ENST00000471862 NPC1L1Q9UHC9 1359 aa15.73■□□□□ 0.11
COL4A3-205ENST00000471862 IL13P35225 146 aa15.72■□□□□ 0.11
COL4A3-205ENST00000471862 SLC16A10Q8TF71 515 aa15.72■□□□□ 0.11
COL4A3-205ENST00000471862 AEBP1Q8IUX7 1158 aa15.71■□□□□ 0.11
COL4A3-205ENST00000471862 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
COL4A3-205ENST00000471862 C4BP0C0L5 1744 aa15.71■□□□□ 0.1
COL4A3-205ENST00000471862 TFCP2L1Q9NZI6 479 aa15.7■□□□□ 0.1
COL4A3-205ENST00000471862 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
COL4A3-205ENST00000471862 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
COL4A3-205ENST00000471862 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
COL4A3-205ENST00000471862 MTHFSP49914 203 aa15.68■□□□□ 0.1
COL4A3-205ENST00000471862 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
COL4A3-205ENST00000471862 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
COL4A3-205ENST00000471862 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
COL4A3-205ENST00000471862 TMOD3Q9NYL9 352 aa15.68■□□□□ 0.1
COL4A3-205ENST00000471862 ZNF831Q5JPB2 1677 aa15.67■□□□□ 0.1
COL4A3-205ENST00000471862 CC2D1BQ5T0F9 858 aaKnown RBP15.67■□□□□ 0.1
COL4A3-205ENST00000471862 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
COL4A3-205ENST00000471862 ARXQ96QS3 562 aa15.67■□□□□ 0.1
COL4A3-205ENST00000471862 FHDC1Q9C0D6 1143 aaPredicted RBP15.67■□□□□ 0.1
COL4A3-205ENST00000471862 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
COL4A3-205ENST00000471862 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-205ENST00000471862 LOC102724428A0A0B4J2F2 783 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 ERVV-2B6SEH9 535 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 HSP90AB1P08238 724 aaKnown RBP15.66■□□□□ 0.1
COL4A3-205ENST00000471862 HMGB2P26583 209 aaKnown RBP15.66■□□□□ 0.1
COL4A3-205ENST00000471862 SIK1P57059 783 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 ZNF530Q6P9A1 599 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-205ENST00000471862 DCAF5Q96JK2 942 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 SCN11AQ9UI33 1791 aa15.66■□□□□ 0.1
COL4A3-205ENST00000471862 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
COL4A3-205ENST00000471862 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
COL4A3-205ENST00000471862 ITPK1Q13572 414 aa15.63■□□□□ 0.09
COL4A3-205ENST00000471862 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
COL4A3-205ENST00000471862 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms