RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 HOXC9P31274 260 aa13.13□□□□□ -0.31
GGPS1-204ENST00000471812 IP6K1Q92551 441 aa13.13□□□□□ -0.31
GGPS1-204ENST00000471812 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
GGPS1-204ENST00000471812 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
GGPS1-204ENST00000471812 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
GGPS1-204ENST00000471812 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
GGPS1-204ENST00000471812 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
GGPS1-204ENST00000471812 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
GGPS1-204ENST00000471812 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
GGPS1-204ENST00000471812 RREB1Q92766 1687 aa13.12□□□□□ -0.31
GGPS1-204ENST00000471812 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
GGPS1-204ENST00000471812 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
GGPS1-204ENST00000471812 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
GGPS1-204ENST00000471812 PANK3Q9H999 370 aa13.11□□□□□ -0.31
GGPS1-204ENST00000471812 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
GGPS1-204ENST00000471812 MEGF6O75095 1541 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 DDB1Q16531 1140 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
GGPS1-204ENST00000471812 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
GGPS1-204ENST00000471812 HAX1O00165 279 aa13.09□□□□□ -0.31
GGPS1-204ENST00000471812 AMPHP49418 695 aa13.09□□□□□ -0.31
GGPS1-204ENST00000471812 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
GGPS1-204ENST00000471812 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-204ENST00000471812 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-204ENST00000471812 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
GGPS1-204ENST00000471812 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
GGPS1-204ENST00000471812 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
GGPS1-204ENST00000471812 KCNQ2O43526 872 aa13.07□□□□□ -0.32
GGPS1-204ENST00000471812 APBA3O96018 575 aa13.07□□□□□ -0.32
GGPS1-204ENST00000471812 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
GGPS1-204ENST00000471812 BTAF1O14981 1849 aa13.06□□□□□ -0.32
GGPS1-204ENST00000471812 NHSQ6T4R5 1651 aa13.06□□□□□ -0.32
GGPS1-204ENST00000471812 BAG6P46379 1132 aa13.06□□□□□ -0.32
GGPS1-204ENST00000471812 ACSBG1Q96GR2 724 aa13.06□□□□□ -0.32
GGPS1-204ENST00000471812 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
GGPS1-204ENST00000471812 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
GGPS1-204ENST00000471812 IL2RBP14784 551 aa13.05□□□□□ -0.32
GGPS1-204ENST00000471812 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-204ENST00000471812 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
GGPS1-204ENST00000471812 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
GGPS1-204ENST00000471812 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
GGPS1-204ENST00000471812 INSRP06213 1382 aa13.04□□□□□ -0.32
GGPS1-204ENST00000471812 FLT4P35916 1363 aa13.04□□□□□ -0.32
GGPS1-204ENST00000471812 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
GGPS1-204ENST00000471812 EXOC5O00471 708 aa13.03□□□□□ -0.32
GGPS1-204ENST00000471812 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
GGPS1-204ENST00000471812 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-204ENST00000471812 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
GGPS1-204ENST00000471812 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
GGPS1-204ENST00000471812 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
GGPS1-204ENST00000471812 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-204ENST00000471812 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-204ENST00000471812 BCL9O00512 1426 aa13.01□□□□□ -0.33
GGPS1-204ENST00000471812 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
GGPS1-204ENST00000471812 NCAPD2Q15021 1401 aa13□□□□□ -0.33
GGPS1-204ENST00000471812 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
GGPS1-204ENST00000471812 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
GGPS1-204ENST00000471812 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
GGPS1-204ENST00000471812 NSD2O96028 1365 aa12.99□□□□□ -0.33
GGPS1-204ENST00000471812 EIF4A2Q14240 407 aaKnown RBP12.99□□□□□ -0.33
GGPS1-204ENST00000471812 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-204ENST00000471812 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-204ENST00000471812 ITGB4P16144 1822 aa12.99□□□□□ -0.33
GGPS1-204ENST00000471812 SMG6Q86US8 1419 aaKnown RBP12.98□□□□□ -0.33
GGPS1-204ENST00000471812 EYA1Q99502 592 aa12.98□□□□□ -0.33
GGPS1-204ENST00000471812 KCNQ4P56696 695 aa12.97□□□□□ -0.33
GGPS1-204ENST00000471812 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
GGPS1-204ENST00000471812 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
GGPS1-204ENST00000471812 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
GGPS1-204ENST00000471812 CYP27B1O15528 508 aa12.96□□□□□ -0.33
GGPS1-204ENST00000471812 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
GGPS1-204ENST00000471812 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
GGPS1-204ENST00000471812 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
GGPS1-204ENST00000471812 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
GGPS1-204ENST00000471812 CASZ1Q86V15 1759 aa12.96□□□□□ -0.34
GGPS1-204ENST00000471812 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
GGPS1-204ENST00000471812 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
GGPS1-204ENST00000471812 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
GGPS1-204ENST00000471812 LRP5O75197 1615 aa12.95□□□□□ -0.34
GGPS1-204ENST00000471812 LY75O60449 1722 aa12.94□□□□□ -0.34
GGPS1-204ENST00000471812 PLSCR1O15162 318 aa12.94□□□□□ -0.34
GGPS1-204ENST00000471812 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
GGPS1-204ENST00000471812 TXNRD1Q16881 649 aa12.94□□□□□ -0.34
GGPS1-204ENST00000471812 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
GGPS1-204ENST00000471812 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
GGPS1-204ENST00000471812 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
GGPS1-204ENST00000471812 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-204ENST00000471812 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
GGPS1-204ENST00000471812 RAPGEF4Q8WZA2 1011 aa12.92□□□□□ -0.34
GGPS1-204ENST00000471812 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-204ENST00000471812 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-204ENST00000471812 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
GGPS1-204ENST00000471812 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
GGPS1-204ENST00000471812 MIER1Q8N108 512 aa12.91□□□□□ -0.34
GGPS1-204ENST00000471812 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
GGPS1-204ENST00000471812 EVX2Q03828 476 aa12.9□□□□□ -0.34
GGPS1-204ENST00000471812 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms