RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
HOXB3-206ENST00000471459 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
HOXB3-206ENST00000471459 SBF2Q86WG5 1849 aa20.35■□□□□ 0.85
HOXB3-206ENST00000471459 SPON1Q9HCB6 807 aa20.35■□□□□ 0.85
HOXB3-206ENST00000471459 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
HOXB3-206ENST00000471459 SRCAPQ6ZRS2 3230 aa20.34■□□□□ 0.85
HOXB3-206ENST00000471459 KIF7Q2M1P5 1343 aa20.34■□□□□ 0.85
HOXB3-206ENST00000471459 EYA1Q99502 592 aa20.33■□□□□ 0.85
HOXB3-206ENST00000471459 MEGF6O75095 1541 aa20.32■□□□□ 0.84
HOXB3-206ENST00000471459 RREB1Q92766 1687 aa20.32■□□□□ 0.84
HOXB3-206ENST00000471459 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
HOXB3-206ENST00000471459 SLC15A2Q16348 729 aa20.32■□□□□ 0.84
HOXB3-206ENST00000471459 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
HOXB3-206ENST00000471459 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-206ENST00000471459 ANO8Q9HCE9 1232 aaPredicted RBP20.31■□□□□ 0.84
HOXB3-206ENST00000471459 RGPD3A6NKT7 1758 aaPredicted RBP20.31■□□□□ 0.84
HOXB3-206ENST00000471459 RGPD4Q7Z3J3 1758 aa20.31■□□□□ 0.84
HOXB3-206ENST00000471459 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
HOXB3-206ENST00000471459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
HOXB3-206ENST00000471459 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
HOXB3-206ENST00000471459 KAT6BQ8WYB5 2073 aa20.3■□□□□ 0.84
HOXB3-206ENST00000471459 NHSQ6T4R5 1651 aa20.29■□□□□ 0.84
HOXB3-206ENST00000471459 LRP5O75197 1615 aa20.28■□□□□ 0.84
HOXB3-206ENST00000471459 CYP27B1O15528 508 aa20.26■□□□□ 0.83
HOXB3-206ENST00000471459 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
HOXB3-206ENST00000471459 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
HOXB3-206ENST00000471459 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
HOXB3-206ENST00000471459 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
HOXB3-206ENST00000471459 LRRC4BQ9NT99 713 aa20.24■□□□□ 0.83
HOXB3-206ENST00000471459 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-206ENST00000471459 MAP2P11137 1827 aaKnown RBP20.24■□□□□ 0.83
HOXB3-206ENST00000471459 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
HOXB3-206ENST00000471459 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
HOXB3-206ENST00000471459 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
HOXB3-206ENST00000471459 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
HOXB3-206ENST00000471459 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
HOXB3-206ENST00000471459 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
HOXB3-206ENST00000471459 TFCP2L1Q9NZI6 479 aa20.22■□□□□ 0.83
HOXB3-206ENST00000471459 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
HOXB3-206ENST00000471459 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
HOXB3-206ENST00000471459 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
HOXB3-206ENST00000471459 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
HOXB3-206ENST00000471459 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
HOXB3-206ENST00000471459 ATF5Q9Y2D1 282 aaPredicted RBP20.21■□□□□ 0.83
HOXB3-206ENST00000471459 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
HOXB3-206ENST00000471459 BTAF1O14981 1849 aa20.2■□□□□ 0.82
HOXB3-206ENST00000471459 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
HOXB3-206ENST00000471459 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
HOXB3-206ENST00000471459 PHKG2P15735 406 aa20.19■□□□□ 0.82
HOXB3-206ENST00000471459 MTHFSP49914 203 aa20.19■□□□□ 0.82
HOXB3-206ENST00000471459 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
HOXB3-206ENST00000471459 TMOD3Q9NYL9 352 aa20.19■□□□□ 0.82
HOXB3-206ENST00000471459 KCNQ4P56696 695 aa20.18■□□□□ 0.82
HOXB3-206ENST00000471459 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
HOXB3-206ENST00000471459 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
HOXB3-206ENST00000471459 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
HOXB3-206ENST00000471459 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
HOXB3-206ENST00000471459 SULT6B1Q6IMI4 303 aa20.17■□□□□ 0.82
HOXB3-206ENST00000471459 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
HOXB3-206ENST00000471459 PIGBQ92521 554 aa20.16■□□□□ 0.82
HOXB3-206ENST00000471459 MSH5O43196 834 aa20.15■□□□□ 0.82
HOXB3-206ENST00000471459 IL13P35225 146 aa20.15■□□□□ 0.82
HOXB3-206ENST00000471459 ZNF530Q6P9A1 599 aaPredicted RBP20.15■□□□□ 0.82
HOXB3-206ENST00000471459 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
HOXB3-206ENST00000471459 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
HOXB3-206ENST00000471459 DOT1LQ8TEK3 1739 aa20.15■□□□□ 0.82
HOXB3-206ENST00000471459 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
HOXB3-206ENST00000471459 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
HOXB3-206ENST00000471459 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
HOXB3-206ENST00000471459 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
HOXB3-206ENST00000471459 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
HOXB3-206ENST00000471459 POLD1P28340 1107 aa20.12■□□□□ 0.81
HOXB3-206ENST00000471459 PTGER2P43116 358 aa20.11■□□□□ 0.81
HOXB3-206ENST00000471459 CABP4P57796 275 aa20.11■□□□□ 0.81
HOXB3-206ENST00000471459 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
HOXB3-206ENST00000471459 ARXQ96QS3 562 aa20.1■□□□□ 0.81
HOXB3-206ENST00000471459 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
HOXB3-206ENST00000471459 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
HOXB3-206ENST00000471459 AK7Q96M32 723 aa20.09■□□□□ 0.81
HOXB3-206ENST00000471459 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
HOXB3-206ENST00000471459 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
HOXB3-206ENST00000471459 SIK1P57059 783 aa20.08■□□□□ 0.81
HOXB3-206ENST00000471459 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
HOXB3-206ENST00000471459 ATP6V1AP38606 617 aa20.07■□□□□ 0.8
HOXB3-206ENST00000471459 CASZ1Q86V15 1759 aa20.07■□□□□ 0.8
HOXB3-206ENST00000471459 KDRP35968 1356 aa20.07■□□□□ 0.8
HOXB3-206ENST00000471459 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
HOXB3-206ENST00000471459 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
HOXB3-206ENST00000471459 HMOX1P09601 288 aa20.06■□□□□ 0.8
HOXB3-206ENST00000471459 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
HOXB3-206ENST00000471459 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
HOXB3-206ENST00000471459 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
HOXB3-206ENST00000471459 SGIP1Q9BQI5 828 aa20.05■□□□□ 0.8
HOXB3-206ENST00000471459 FHDC1Q9C0D6 1143 aaPredicted RBP20.05■□□□□ 0.8
HOXB3-206ENST00000471459 SYT17Q9BSW7 474 aa20.04■□□□□ 0.8
HOXB3-206ENST00000471459 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
HOXB3-206ENST00000471459 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
HOXB3-206ENST00000471459 LY75O60449 1722 aa20.04■□□□□ 0.8
HOXB3-206ENST00000471459 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
HOXB3-206ENST00000471459 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms