RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 AMOTQ4VCS5 1084 aa15.5■□□□□ 0.07
LINC00880-201ENST00000471357 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
LINC00880-201ENST00000471357 LMO7Q8WWI1 1683 aa15.5■□□□□ 0.07
LINC00880-201ENST00000471357 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
LINC00880-201ENST00000471357 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
LINC00880-201ENST00000471357 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
LINC00880-201ENST00000471357 COL16A1Q07092 1604 aaPredicted RBP15.49■□□□□ 0.07
LINC00880-201ENST00000471357 RAPGEF4Q8WZA2 1011 aa15.48■□□□□ 0.07
LINC00880-201ENST00000471357 FAM208AQ9UK61 1670 aaKnown RBP15.48■□□□□ 0.07
LINC00880-201ENST00000471357 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
LINC00880-201ENST00000471357 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.48■□□□□ 0.07
LINC00880-201ENST00000471357 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
LINC00880-201ENST00000471357 PLIN1O60240 522 aa15.47■□□□□ 0.07
LINC00880-201ENST00000471357 BCAR3O75815 825 aa15.47■□□□□ 0.07
LINC00880-201ENST00000471357 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
LINC00880-201ENST00000471357 CRB1P82279 1406 aa15.46■□□□□ 0.07
LINC00880-201ENST00000471357 TATP17735 454 aaPredicted RBP15.46■□□□□ 0.07
LINC00880-201ENST00000471357 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
LINC00880-201ENST00000471357 AKAP4Q5JQC9 854 aa15.46■□□□□ 0.07
LINC00880-201ENST00000471357 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
LINC00880-201ENST00000471357 CHL1O00533 1208 aa15.46■□□□□ 0.07
LINC00880-201ENST00000471357 EVA1CP58658 441 aa15.46■□□□□ 0.07
LINC00880-201ENST00000471357 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
LINC00880-201ENST00000471357 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
LINC00880-201ENST00000471357 C1orf141Q5JVX7 400 aa15.44■□□□□ 0.06
LINC00880-201ENST00000471357 STRN4Q9NRL3 753 aa15.44■□□□□ 0.06
LINC00880-201ENST00000471357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00880-201ENST00000471357 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
LINC00880-201ENST00000471357 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
LINC00880-201ENST00000471357 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
LINC00880-201ENST00000471357 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
LINC00880-201ENST00000471357 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
LINC00880-201ENST00000471357 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
LINC00880-201ENST00000471357 MEGF6O75095 1541 aa15.42■□□□□ 0.06
LINC00880-201ENST00000471357 COL14A1Q05707 1796 aaKnown RBP15.42■□□□□ 0.06
LINC00880-201ENST00000471357 CEMIPQ8WUJ3 1361 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 PPP4R2Q9NY27 417 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 VAMP4O75379 141 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
LINC00880-201ENST00000471357 BCL2L13Q9BXK5 485 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
LINC00880-201ENST00000471357 LRRC37A3O60309 1634 aa15.4■□□□□ 0.06
LINC00880-201ENST00000471357 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
LINC00880-201ENST00000471357 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
LINC00880-201ENST00000471357 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
LINC00880-201ENST00000471357 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
LINC00880-201ENST00000471357 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
LINC00880-201ENST00000471357 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 ADAMTS2O95450 1211 aa15.39■□□□□ 0.05
LINC00880-201ENST00000471357 CANXP27824 592 aaKnown RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
LINC00880-201ENST00000471357 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
LINC00880-201ENST00000471357 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
LINC00880-201ENST00000471357 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
LINC00880-201ENST00000471357 FRAT1Q92837 279 aaPredicted RBP15.39■□□□□ 0.05
LINC00880-201ENST00000471357 IFNL2Q8IZJ0 200 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 EXOC6Q8TAG9 804 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 OVOS2A0A0G2JMS6 1433 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 JCADQ9P266 1359 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 IL2RBP14784 551 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 PHKG2P15735 406 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 TEFQ10587 303 aa15.38■□□□□ 0.05
LINC00880-201ENST00000471357 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
LINC00880-201ENST00000471357 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
LINC00880-201ENST00000471357 KRT24Q2M2I5 525 aa15.36■□□□□ 0.05
LINC00880-201ENST00000471357 ZCRB1Q8TBF4 217 aaKnown RBP15.36■□□□□ 0.05
LINC00880-201ENST00000471357 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
LINC00880-201ENST00000471357 PKD1L3Q7Z443 1732 aa15.35■□□□□ 0.05
LINC00880-201ENST00000471357 CYP27B1O15528 508 aa15.35■□□□□ 0.05
LINC00880-201ENST00000471357 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
LINC00880-201ENST00000471357 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
LINC00880-201ENST00000471357 PARP4Q9UKK3 1724 aaKnown RBP15.35■□□□□ 0.05
LINC00880-201ENST00000471357 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
LINC00880-201ENST00000471357 KIF16BQ96L93 1317 aa15.33■□□□□ 0.05
LINC00880-201ENST00000471357 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.05
LINC00880-201ENST00000471357 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.05
LINC00880-201ENST00000471357 BTBD11A6QL63 1104 aa15.33■□□□□ 0.04
LINC00880-201ENST00000471357 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
LINC00880-201ENST00000471357 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
LINC00880-201ENST00000471357 NOB1Q9ULX3 412 aaKnown RBP15.33■□□□□ 0.04
LINC00880-201ENST00000471357 ADAMTS7Q9UKP4 1686 aa15.33■□□□□ 0.04
LINC00880-201ENST00000471357 IPO8O15397 1037 aaKnown RBP15.33■□□□□ 0.04
LINC00880-201ENST00000471357 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
LINC00880-201ENST00000471357 MS4A1P11836 297 aa15.32■□□□□ 0.04
LINC00880-201ENST00000471357 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
LINC00880-201ENST00000471357 SPATA31A6Q5VVP1 1343 aa15.32■□□□□ 0.04
LINC00880-201ENST00000471357 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
LINC00880-201ENST00000471357 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
LINC00880-201ENST00000471357 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
LINC00880-201ENST00000471357 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
LINC00880-201ENST00000471357 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
LINC00880-201ENST00000471357 HSPA1LP34931 641 aa15.31■□□□□ 0.04
LINC00880-201ENST00000471357 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
LINC00880-201ENST00000471357 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms