RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
PRPF40A-206ENST00000471167 RNF217Q8TC41 542 aa11.07□□□□□ -0.64
PRPF40A-206ENST00000471167 WFS1O76024 890 aa11.06□□□□□ -0.64
PRPF40A-206ENST00000471167 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
PRPF40A-206ENST00000471167 ERBB4Q15303 1308 aa11.06□□□□□ -0.64
PRPF40A-206ENST00000471167 A0A1W2PRU2 124 aa11.05□□□□□ -0.64
PRPF40A-206ENST00000471167 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
PRPF40A-206ENST00000471167 H3BM21 787 aa11.05□□□□□ -0.64
PRPF40A-206ENST00000471167 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-206ENST00000471167 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
PRPF40A-206ENST00000471167 RNF135Q8IUD6 432 aa11.03□□□□□ -0.64
PRPF40A-206ENST00000471167 HRH3Q9Y5N1 445 aa11.03□□□□□ -0.64
PRPF40A-206ENST00000471167 PTSQ03393 145 aa11.02□□□□□ -0.65
PRPF40A-206ENST00000471167 SEMA3FQ13275 785 aa11.02□□□□□ -0.65
PRPF40A-206ENST00000471167 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
PRPF40A-206ENST00000471167 POLMQ9NP87 494 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-206ENST00000471167 RAD21O60216 631 aa11.01□□□□□ -0.65
PRPF40A-206ENST00000471167 PPFIA3O75145 1194 aa11.01□□□□□ -0.65
PRPF40A-206ENST00000471167 SOX11P35716 441 aa11.01□□□□□ -0.65
PRPF40A-206ENST00000471167 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-206ENST00000471167 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.654e-8■■□□□ 12.8
PRPF40A-206ENST00000471167 DOLKQ9UPQ8 538 aa11.01□□□□□ -0.65
PRPF40A-206ENST00000471167 SLC35F4A4IF30 521 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 IL2RAP01589 272 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 PLPP7Q8NBV4 271 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 UCN2Q96RP3 112 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 RAB6BQ9NRW1 208 aa11□□□□□ -0.65
PRPF40A-206ENST00000471167 CLN3Q13286 438 aa10.98□□□□□ -0.65
PRPF40A-206ENST00000471167 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
PRPF40A-206ENST00000471167 HDGFL1Q5TGJ6 251 aa10.98□□□□□ -0.65
PRPF40A-206ENST00000471167 CYP2U1Q7Z449 544 aa10.98□□□□□ -0.65
PRPF40A-206ENST00000471167 MEN1O00255 615 aa10.97□□□□□ -0.65
PRPF40A-206ENST00000471167 PROSER2Q86WR7 435 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-206ENST00000471167 GRIP2Q9C0E4 1043 aa10.97□□□□□ -0.65
PRPF40A-206ENST00000471167 A6NJR5 290 aa10.96□□□□□ -0.65
PRPF40A-206ENST00000471167 GMPRP36959 345 aa10.96□□□□□ -0.65
PRPF40A-206ENST00000471167 XAGE2Q96GT9 111 aa10.96□□□□□ -0.65
PRPF40A-206ENST00000471167 WIPF1O43516 503 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 GNRH1P01148 92 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 SCNN1DP51172 638 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 USP4Q13107 963 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
PRPF40A-206ENST00000471167 RHOQP17081 205 aa10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 LORP23490 312 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 GPC1P35052 558 aa10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 CUEDC1Q9NWM3 386 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 PCDHGA11Q9Y5H2 935 aa10.94□□□□□ -0.66
PRPF40A-206ENST00000471167 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-206ENST00000471167 TBC1D9Q6ZT07 1266 aa10.93□□□□□ -0.66
PRPF40A-206ENST00000471167 LYSMD3Q7Z3D4 306 aa10.93□□□□□ -0.66
PRPF40A-206ENST00000471167 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
PRPF40A-206ENST00000471167 SKIP12755 728 aa10.92□□□□□ -0.66
PRPF40A-206ENST00000471167 CENPCQ03188 943 aa10.92□□□□□ -0.66
PRPF40A-206ENST00000471167 POU4F2Q12837 409 aa10.92□□□□□ -0.66
PRPF40A-206ENST00000471167 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
PRPF40A-206ENST00000471167 DEPDC4Q8N2C3 294 aa10.91□□□□□ -0.66
PRPF40A-206ENST00000471167 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
PRPF40A-206ENST00000471167 TMEM229AB2RXF0 380 aa10.9□□□□□ -0.66
PRPF40A-206ENST00000471167 IRF7Q92985 503 aa10.9□□□□□ -0.66
PRPF40A-206ENST00000471167 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
PRPF40A-206ENST00000471167 KRT76Q01546 638 aa10.89□□□□□ -0.67
PRPF40A-206ENST00000471167 NCOA4Q13772 614 aa10.89□□□□□ -0.67
PRPF40A-206ENST00000471167 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
PRPF40A-206ENST00000471167 GLMNQ92990 594 aa10.89□□□□□ -0.67
PRPF40A-206ENST00000471167 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
PRPF40A-206ENST00000471167 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
PRPF40A-206ENST00000471167 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
PRPF40A-206ENST00000471167 ITGA6P23229 1130 aa10.88□□□□□ -0.67
PRPF40A-206ENST00000471167 NANOS1Q8WY41 292 aaKnown RBP10.88□□□□□ -0.67
PRPF40A-206ENST00000471167 NBPF10Q6P3W6 841 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-206ENST00000471167 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
PRPF40A-206ENST00000471167 INHAP05111 366 aa10.86□□□□□ -0.67
PRPF40A-206ENST00000471167 GDF10P55107 478 aa10.86□□□□□ -0.67
PRPF40A-206ENST00000471167 ZNF295-AS1Q8N0V1 137 aa10.86□□□□□ -0.67
PRPF40A-206ENST00000471167 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-206ENST00000471167 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
PRPF40A-206ENST00000471167 ATP9BO43861 1147 aa10.85□□□□□ -0.67
PRPF40A-206ENST00000471167 THBS1P07996 1170 aa10.85□□□□□ -0.67
PRPF40A-206ENST00000471167 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
PRPF40A-206ENST00000471167 USP3Q9Y6I4 520 aa10.85□□□□□ -0.67
PRPF40A-206ENST00000471167 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
PRPF40A-206ENST00000471167 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
PRPF40A-206ENST00000471167 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
PRPF40A-206ENST00000471167 SIRT1Q96EB6 747 aa10.84□□□□□ -0.67
PRPF40A-206ENST00000471167 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
PRPF40A-206ENST00000471167 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 EML3Q32P44 896 aa10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms