RNA–Protein interactions for RNA: ENST00000470838.1

CPA1-202, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-202ENST00000470838 CGNL1Q0VF96 1302 aa25.65■■□□□ 1.7
CPA1-202ENST00000470838 TMF1P82094 1093 aa25.65■■□□□ 1.7
CPA1-202ENST00000470838 PNPLA7Q6ZV29 1317 aa25.64■■□□□ 1.7
CPA1-202ENST00000470838 MEGF6O75095 1541 aa25.64■■□□□ 1.7
CPA1-202ENST00000470838 RRS1Q15050 365 aaKnown RBP25.64■■□□□ 1.7
CPA1-202ENST00000470838 GOLGB1Q14789 3259 aaKnown RBP25.63■■□□□ 1.69
CPA1-202ENST00000470838 GGNBP2Q9H3C7 697 aa25.63■■□□□ 1.69
CPA1-202ENST00000470838 ZNF784Q8NCA9 323 aaPredicted RBP25.62■■□□□ 1.69
CPA1-202ENST00000470838 QSER1Q2KHR3 1735 aa25.62■■□□□ 1.69
CPA1-202ENST00000470838 COL24A1Q17RW2 1714 aa25.61■■□□□ 1.69
CPA1-202ENST00000470838 KCNQ4P56696 695 aa25.61■■□□□ 1.69
CPA1-202ENST00000470838 SYTL4Q96C24 671 aaPredicted RBP25.61■■□□□ 1.69
CPA1-202ENST00000470838 SHANK3Q9BYB0 1731 aa25.6■■□□□ 1.69
CPA1-202ENST00000470838 USP47Q96K76 1375 aa25.6■■□□□ 1.69
CPA1-202ENST00000470838 RGPD2P0DJD1 1756 aa25.6■■□□□ 1.69
CPA1-202ENST00000470838 INSRP06213 1382 aa25.59■■□□□ 1.69
CPA1-202ENST00000470838 KIF24Q5T7B8 1368 aa25.59■■□□□ 1.69
CPA1-202ENST00000470838 TFCP2L1Q9NZI6 479 aa25.59■■□□□ 1.69
CPA1-202ENST00000470838 LY75O60449 1722 aa25.58■■□□□ 1.69
CPA1-202ENST00000470838 HSP90AB2PQ58FF8 381 aa25.58■■□□□ 1.69
CPA1-202ENST00000470838 CDCA8Q53HL2 280 aa25.57■■□□□ 1.68
CPA1-202ENST00000470838 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
CPA1-202ENST00000470838 CARD14Q9BXL6 1004 aa25.56■■□□□ 1.68
CPA1-202ENST00000470838 DOT1LQ8TEK3 1739 aa25.55■■□□□ 1.68
CPA1-202ENST00000470838 POLD1P28340 1107 aa25.55■■□□□ 1.68
CPA1-202ENST00000470838 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
CPA1-202ENST00000470838 CCNL1Q9UK58 526 aaPredicted RBP25.55■■□□□ 1.68
CPA1-202ENST00000470838 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
CPA1-202ENST00000470838 FLT4P35916 1363 aa25.53■■□□□ 1.68
CPA1-202ENST00000470838 SMG6Q86US8 1419 aaKnown RBP25.53■■□□□ 1.68
CPA1-202ENST00000470838 CHD4Q14839 1912 aa25.52■■□□□ 1.68
CPA1-202ENST00000470838 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
CPA1-202ENST00000470838 COL23A1Q86Y22 540 aaPredicted RBP25.51■■□□□ 1.67
CPA1-202ENST00000470838 CYP27B1O15528 508 aa25.5■■□□□ 1.67
CPA1-202ENST00000470838 TUBGCP6Q96RT7 1819 aa25.5■■□□□ 1.67
CPA1-202ENST00000470838 PCDH11XQ9BZA7 1347 aa25.5■■□□□ 1.67
CPA1-202ENST00000470838 PCDH11YQ9BZA8 1340 aa25.5■■□□□ 1.67
CPA1-202ENST00000470838 HMGB2P26583 209 aaKnown RBP25.49■■□□□ 1.67
CPA1-202ENST00000470838 GPR162Q16538 588 aa25.49■■□□□ 1.67
CPA1-202ENST00000470838 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
CPA1-202ENST00000470838 NCAPD2Q15021 1401 aa25.47■■□□□ 1.67
CPA1-202ENST00000470838 NKX1-1Q15270 411 aaPredicted RBP25.46■■□□□ 1.67
CPA1-202ENST00000470838 NLGN2Q8NFZ4 835 aa25.46■■□□□ 1.67
CPA1-202ENST00000470838 EMILIN1Q9Y6C2 1016 aa25.46■■□□□ 1.67
CPA1-202ENST00000470838 WASHC2AQ641Q2 1341 aa25.43■■□□□ 1.66
CPA1-202ENST00000470838 MPRIPQ6WCQ1 1025 aa25.43■■□□□ 1.66
CPA1-202ENST00000470838 FLAD1Q8NFF5 587 aa25.43■■□□□ 1.66
CPA1-202ENST00000470838 PALLDQ8WX93 1383 aa25.43■■□□□ 1.66
CPA1-202ENST00000470838 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
CPA1-202ENST00000470838 NSD3Q9BZ95 1437 aa25.42■■□□□ 1.66
CPA1-202ENST00000470838 KLHL34Q8N239 644 aa25.41■■□□□ 1.66
CPA1-202ENST00000470838 SMARCC1Q92922 1105 aaPredicted RBP25.41■■□□□ 1.66
CPA1-202ENST00000470838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.41■■□□□ 1.66
CPA1-202ENST00000470838 PIGBQ92521 554 aa25.39■■□□□ 1.66
CPA1-202ENST00000470838 MSH5O43196 834 aa25.38■■□□□ 1.65
CPA1-202ENST00000470838 C1QTNF8P60827 252 aa25.38■■□□□ 1.65
CPA1-202ENST00000470838 EYA1Q99502 592 aa25.38■■□□□ 1.65
CPA1-202ENST00000470838 GRIN3BO60391 1043 aa25.37■■□□□ 1.65
CPA1-202ENST00000470838 YBX3P16989 372 aaKnown RBP eCLIP25.37■■□□□ 1.65
CPA1-202ENST00000470838 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
CPA1-202ENST00000470838 CD2APQ9Y5K6 639 aa25.37■■□□□ 1.65
CPA1-202ENST00000470838 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
CPA1-202ENST00000470838 C5P01031 1676 aa25.36■■□□□ 1.65
CPA1-202ENST00000470838 SPG7Q9UQ90 795 aa25.36■■□□□ 1.65
CPA1-202ENST00000470838 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
CPA1-202ENST00000470838 MSL1Q68DK7 614 aa25.35■■□□□ 1.65
CPA1-202ENST00000470838 AMIGO3Q86WK7 504 aa25.35■■□□□ 1.65
CPA1-202ENST00000470838 TAF1LQ8IZX4 1826 aa25.35■■□□□ 1.65
CPA1-202ENST00000470838 TOGARAM1Q9Y4F4 1720 aa25.34■■□□□ 1.65
CPA1-202ENST00000470838 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
CPA1-202ENST00000470838 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.65
CPA1-202ENST00000470838 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.65
CPA1-202ENST00000470838 ITGB4P16144 1822 aa25.33■■□□□ 1.64
CPA1-202ENST00000470838 PLEKHG2Q9H7P9 1386 aa25.31■■□□□ 1.64
CPA1-202ENST00000470838 C4BP0C0L5 1744 aa25.3■■□□□ 1.64
CPA1-202ENST00000470838 LOC102724428A0A0B4J2F2 783 aa25.3■■□□□ 1.64
CPA1-202ENST00000470838 SIK1P57059 783 aa25.3■■□□□ 1.64
CPA1-202ENST00000470838 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
CPA1-202ENST00000470838 PHKG2P15735 406 aa25.29■■□□□ 1.64
CPA1-202ENST00000470838 IFNL2Q8IZJ0 200 aa25.29■■□□□ 1.64
CPA1-202ENST00000470838 AK7Q96M32 723 aa25.29■■□□□ 1.64
CPA1-202ENST00000470838 SSFA2P28290 1259 aa25.28■■□□□ 1.64
CPA1-202ENST00000470838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.27■■□□□ 1.64
CPA1-202ENST00000470838 EIF4A2Q14240 407 aaKnown RBP25.27■■□□□ 1.64
CPA1-202ENST00000470838 LINC00116Q8NCU8 138 aa25.27■■□□□ 1.64
CPA1-202ENST00000470838 ASAP1Q9ULH1 1129 aa25.27■■□□□ 1.64
CPA1-202ENST00000470838 TMOD3Q9NYL9 352 aa25.26■■□□□ 1.63
CPA1-202ENST00000470838 ITPK1Q13572 414 aa25.25■■□□□ 1.63
CPA1-202ENST00000470838 SMIM5Q71RC9 77 aa25.25■■□□□ 1.63
CPA1-202ENST00000470838 UBR3Q6ZT12 1888 aa25.25■■□□□ 1.63
CPA1-202ENST00000470838 CEP350Q5VT06 3117 aa25.25■■□□□ 1.63
CPA1-202ENST00000470838 ATG3Q9NT62 314 aa25.24■■□□□ 1.63
CPA1-202ENST00000470838 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
CPA1-202ENST00000470838 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
CPA1-202ENST00000470838 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
CPA1-202ENST00000470838 ERVV-2B6SEH9 535 aa25.21■■□□□ 1.63
CPA1-202ENST00000470838 PHF14O94880 888 aa25.2■■□□□ 1.62
CPA1-202ENST00000470838 ATP6V1AP38606 617 aa25.2■■□□□ 1.62
CPA1-202ENST00000470838 SLC4A9Q96Q91 983 aa25.19■■□□□ 1.62
CPA1-202ENST00000470838 TNNT2P45379 298 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms