RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
LMCD1-207ENST00000470776 NLRP2Q9NX02 1062 aa11.6□□□□□ -0.55
LMCD1-207ENST00000470776 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
LMCD1-207ENST00000470776 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
LMCD1-207ENST00000470776 GNAI1P63096 354 aa11.59□□□□□ -0.55
LMCD1-207ENST00000470776 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
LMCD1-207ENST00000470776 RGS17Q9UGC6 210 aaPredicted RBP11.59□□□□□ -0.55
LMCD1-207ENST00000470776 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
LMCD1-207ENST00000470776 CRB1P82279 1406 aa11.59□□□□□ -0.55
LMCD1-207ENST00000470776 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
LMCD1-207ENST00000470776 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 AKAP4Q5JQC9 854 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 RGPD5Q99666 1765 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
LMCD1-207ENST00000470776 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 MAP3K5Q99683 1374 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 CHL1O00533 1208 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
LMCD1-207ENST00000470776 EVA1CP58658 441 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
LMCD1-207ENST00000470776 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 IL17REQ8NFR9 667 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
LMCD1-207ENST00000470776 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
LMCD1-207ENST00000470776 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 LRP6O75581 1613 aa11.57□□□□□ -0.56
LMCD1-207ENST00000470776 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
LMCD1-207ENST00000470776 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
LMCD1-207ENST00000470776 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
LMCD1-207ENST00000470776 MEGF6O75095 1541 aa11.55□□□□□ -0.56
LMCD1-207ENST00000470776 SLIT2O94813 1529 aa11.55□□□□□ -0.56
LMCD1-207ENST00000470776 OVOS2A0A0G2JMS6 1433 aa11.55□□□□□ -0.56
LMCD1-207ENST00000470776 ZNF530Q6P9A1 599 aaPredicted RBP11.55□□□□□ -0.56
LMCD1-207ENST00000470776 MCM10Q7L590 875 aa11.55□□□□□ -0.56
LMCD1-207ENST00000470776 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
LMCD1-207ENST00000470776 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
LMCD1-207ENST00000470776 IL2RBP14784 551 aa11.54□□□□□ -0.56
LMCD1-207ENST00000470776 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
LMCD1-207ENST00000470776 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
LMCD1-207ENST00000470776 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
LMCD1-207ENST00000470776 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
LMCD1-207ENST00000470776 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
LMCD1-207ENST00000470776 MBIPQ9NS73 344 aa11.54□□□□□ -0.56
LMCD1-207ENST00000470776 DLG5Q8TDM6 1919 aa11.53□□□□□ -0.56
LMCD1-207ENST00000470776 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
LMCD1-207ENST00000470776 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
LMCD1-207ENST00000470776 PHKG2P15735 406 aa11.53□□□□□ -0.56
LMCD1-207ENST00000470776 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
LMCD1-207ENST00000470776 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
LMCD1-207ENST00000470776 FNBP4Q8N3X1 1017 aaPredicted RBP11.53□□□□□ -0.56
LMCD1-207ENST00000470776 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
LMCD1-207ENST00000470776 DISP2A7MBM2 1401 aa11.52□□□□□ -0.56
LMCD1-207ENST00000470776 RARSP54136 660 aaKnown RBP11.52□□□□□ -0.57
LMCD1-207ENST00000470776 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
LMCD1-207ENST00000470776 FKBP8Q14318 412 aa11.52□□□□□ -0.57
LMCD1-207ENST00000470776 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
LMCD1-207ENST00000470776 C1orf141Q5JVX7 400 aa11.52□□□□□ -0.57
LMCD1-207ENST00000470776 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
LMCD1-207ENST00000470776 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
LMCD1-207ENST00000470776 THRAP3Q9Y2W1 955 aaKnown RBP11.52□□□□□ -0.57
LMCD1-207ENST00000470776 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.57
LMCD1-207ENST00000470776 CYP27B1O15528 508 aa11.51□□□□□ -0.57
LMCD1-207ENST00000470776 VAMP4O75379 141 aa11.51□□□□□ -0.57
LMCD1-207ENST00000470776 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
LMCD1-207ENST00000470776 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
LMCD1-207ENST00000470776 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
LMCD1-207ENST00000470776 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
LMCD1-207ENST00000470776 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 ALDH1L2Q3SY69 923 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 UNC5CLQ8IV45 518 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
LMCD1-207ENST00000470776 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
LMCD1-207ENST00000470776 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 BCL9LQ86UU0 1499 aa11.5□□□□□ -0.57
LMCD1-207ENST00000470776 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 SPATA31A5Q5VU36 1347 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 SPATA31A7Q8IWB4 1347 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
LMCD1-207ENST00000470776 KDM6AO15550 1401 aaPredicted RBP11.49□□□□□ -0.57
LMCD1-207ENST00000470776 VPS72Q15906 364 aa11.48□□□□□ -0.57
LMCD1-207ENST00000470776 MEX3CQ5U5Q3 659 aaKnown RBP11.48□□□□□ -0.57
LMCD1-207ENST00000470776 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
LMCD1-207ENST00000470776 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.48□□□□□ -0.57
LMCD1-207ENST00000470776 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
LMCD1-207ENST00000470776 PLCH1Q4KWH8 1693 aa11.48□□□□□ -0.57
LMCD1-207ENST00000470776 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
LMCD1-207ENST00000470776 MRC1P22897 1456 aa11.47□□□□□ -0.57
LMCD1-207ENST00000470776 BCAR3O75815 825 aa11.47□□□□□ -0.57
LMCD1-207ENST00000470776 TEFQ10587 303 aa11.47□□□□□ -0.57
LMCD1-207ENST00000470776 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
LMCD1-207ENST00000470776 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms