RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
ABCA4-204ENST00000470771 SLC27A3Q5K4L6 730 aa18.86■□□□□ 0.61
ABCA4-204ENST00000470771 KAT6BQ8WYB5 2073 aa18.86■□□□□ 0.61
ABCA4-204ENST00000470771 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
ABCA4-204ENST00000470771 USHBP1Q8N6Y0 703 aa18.84■□□□□ 0.61
ABCA4-204ENST00000470771 NHSQ6T4R5 1651 aa18.83■□□□□ 0.61
ABCA4-204ENST00000470771 ZBTB7AO95365 584 aa18.82■□□□□ 0.6
ABCA4-204ENST00000470771 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
ABCA4-204ENST00000470771 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
ABCA4-204ENST00000470771 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
ABCA4-204ENST00000470771 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
ABCA4-204ENST00000470771 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
ABCA4-204ENST00000470771 PANK3Q9H999 370 aa18.81■□□□□ 0.6
ABCA4-204ENST00000470771 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
ABCA4-204ENST00000470771 TNNT2P45379 298 aaPredicted RBP18.79■□□□□ 0.6
ABCA4-204ENST00000470771 POLKQ9UBT6 870 aa18.79■□□□□ 0.6
ABCA4-204ENST00000470771 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
ABCA4-204ENST00000470771 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
ABCA4-204ENST00000470771 MEGF6O75095 1541 aa18.79■□□□□ 0.6
ABCA4-204ENST00000470771 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
ABCA4-204ENST00000470771 LRRC4BQ9NT99 713 aa18.78■□□□□ 0.6
ABCA4-204ENST00000470771 MYOM1P52179 1685 aa18.77■□□□□ 0.6
ABCA4-204ENST00000470771 BTAF1O14981 1849 aa18.77■□□□□ 0.59
ABCA4-204ENST00000470771 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
ABCA4-204ENST00000470771 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
ABCA4-204ENST00000470771 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
ABCA4-204ENST00000470771 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
ABCA4-204ENST00000470771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
ABCA4-204ENST00000470771 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
ABCA4-204ENST00000470771 RGPD2P0DJD1 1756 aa18.74■□□□□ 0.59
ABCA4-204ENST00000470771 NSD2O96028 1365 aa18.74■□□□□ 0.59
ABCA4-204ENST00000470771 PTGER2P43116 358 aa18.74■□□□□ 0.59
ABCA4-204ENST00000470771 EYA1Q99502 592 aa18.74■□□□□ 0.59
ABCA4-204ENST00000470771 MPRIPQ6WCQ1 1025 aa18.73■□□□□ 0.59
ABCA4-204ENST00000470771 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
ABCA4-204ENST00000470771 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
ABCA4-204ENST00000470771 CYP27B1O15528 508 aa18.72■□□□□ 0.59
ABCA4-204ENST00000470771 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
ABCA4-204ENST00000470771 ARXQ96QS3 562 aa18.71■□□□□ 0.59
ABCA4-204ENST00000470771 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
ABCA4-204ENST00000470771 POLD1P28340 1107 aa18.7■□□□□ 0.58
ABCA4-204ENST00000470771 KCNQ4P56696 695 aa18.7■□□□□ 0.58
ABCA4-204ENST00000470771 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
ABCA4-204ENST00000470771 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
ABCA4-204ENST00000470771 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
ABCA4-204ENST00000470771 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
ABCA4-204ENST00000470771 MSH5O43196 834 aa18.68■□□□□ 0.58
ABCA4-204ENST00000470771 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
ABCA4-204ENST00000470771 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
ABCA4-204ENST00000470771 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
ABCA4-204ENST00000470771 SYT17Q9BSW7 474 aa18.67■□□□□ 0.58
ABCA4-204ENST00000470771 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
ABCA4-204ENST00000470771 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
ABCA4-204ENST00000470771 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
ABCA4-204ENST00000470771 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
ABCA4-204ENST00000470771 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
ABCA4-204ENST00000470771 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
ABCA4-204ENST00000470771 HSP90AB1P08238 724 aaKnown RBP18.65■□□□□ 0.58
ABCA4-204ENST00000470771 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
ABCA4-204ENST00000470771 PIGBQ92521 554 aa18.65■□□□□ 0.58
ABCA4-204ENST00000470771 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
ABCA4-204ENST00000470771 SHANK3Q9BYB0 1731 aa18.64■□□□□ 0.57
ABCA4-204ENST00000470771 PHKG2P15735 406 aa18.64■□□□□ 0.57
ABCA4-204ENST00000470771 YY1P25490 414 aa18.64■□□□□ 0.57
ABCA4-204ENST00000470771 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
ABCA4-204ENST00000470771 ANKRD26Q9UPS8 1709 aa18.63■□□□□ 0.57
ABCA4-204ENST00000470771 KIF7Q2M1P5 1343 aa18.63■□□□□ 0.57
ABCA4-204ENST00000470771 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
ABCA4-204ENST00000470771 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
ABCA4-204ENST00000470771 AK7Q96M32 723 aa18.61■□□□□ 0.57
ABCA4-204ENST00000470771 LY75O60449 1722 aa18.6■□□□□ 0.57
ABCA4-204ENST00000470771 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
ABCA4-204ENST00000470771 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
ABCA4-204ENST00000470771 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 SIK1P57059 783 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 COL23A1Q86Y22 540 aaPredicted RBP18.59■□□□□ 0.57
ABCA4-204ENST00000470771 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 PKD1L3Q7Z443 1732 aa18.59■□□□□ 0.57
ABCA4-204ENST00000470771 SULT6B1Q6IMI4 303 aa18.58■□□□□ 0.56
ABCA4-204ENST00000470771 ZNF530Q6P9A1 599 aaPredicted RBP18.58■□□□□ 0.56
ABCA4-204ENST00000470771 MTHFSP49914 203 aa18.57■□□□□ 0.56
ABCA4-204ENST00000470771 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
ABCA4-204ENST00000470771 UTRNP46939 3433 aa18.57■□□□□ 0.56
ABCA4-204ENST00000470771 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
ABCA4-204ENST00000470771 CABP4P57796 275 aa18.56■□□□□ 0.56
ABCA4-204ENST00000470771 QSER1Q2KHR3 1735 aa18.56■□□□□ 0.56
ABCA4-204ENST00000470771 IL13P35225 146 aa18.55■□□□□ 0.56
ABCA4-204ENST00000470771 GPR162Q16538 588 aa18.55■□□□□ 0.56
ABCA4-204ENST00000470771 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
ABCA4-204ENST00000470771 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
ABCA4-204ENST00000470771 GOLGB1Q14789 3259 aaKnown RBP18.54■□□□□ 0.56
ABCA4-204ENST00000470771 SSFA2P28290 1259 aa18.53■□□□□ 0.56
ABCA4-204ENST00000470771 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
ABCA4-204ENST00000470771 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
ABCA4-204ENST00000470771 ITGB4P16144 1822 aa18.52■□□□□ 0.56
ABCA4-204ENST00000470771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
ABCA4-204ENST00000470771 PHF14O94880 888 aa18.52■□□□□ 0.56
ABCA4-204ENST00000470771 MSL1Q68DK7 614 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms