RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SUPT5HO00267 1087 aaKnown RBP11.14□□□□□ -0.63
SSB-209ENST00000470621 ERVK-9P63128 1117 aa11.14□□□□□ -0.63
SSB-209ENST00000470621 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
SSB-209ENST00000470621 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
SSB-209ENST00000470621 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
SSB-209ENST00000470621 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
SSB-209ENST00000470621 CC2D2BQ6DHV5 1058 aa11.12□□□□□ -0.63
SSB-209ENST00000470621 Q6ZVU0 165 aa11.12□□□□□ -0.63
SSB-209ENST00000470621 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
SSB-209ENST00000470621 AGBL1Q96MI9 1066 aa11.12□□□□□ -0.63
SSB-209ENST00000470621 ATP9BO43861 1147 aa11.11□□□□□ -0.63
SSB-209ENST00000470621 NCOA4Q13772 614 aa11.11□□□□□ -0.63
SSB-209ENST00000470621 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
SSB-209ENST00000470621 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
SSB-209ENST00000470621 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
SSB-209ENST00000470621 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
SSB-209ENST00000470621 KDF1Q8NAX2 398 aaPredicted RBP11.1□□□□□ -0.63
SSB-209ENST00000470621 OSBPL3Q9H4L5 887 aa11.1□□□□□ -0.63
SSB-209ENST00000470621 MAFBQ9Y5Q3 323 aaPredicted RBP11.1□□□□□ -0.63
SSB-209ENST00000470621 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 ADH1AP07327 375 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 MAP7D1Q3KQU3 841 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
SSB-209ENST00000470621 STAU1O95793 577 aaKnown RBP11.08□□□□□ -0.64
SSB-209ENST00000470621 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
SSB-209ENST00000470621 MRPL14Q6P1L8 145 aaKnown RBP11.08□□□□□ -0.64
SSB-209ENST00000470621 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
SSB-209ENST00000470621 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
SSB-209ENST00000470621 RELBQ01201 579 aa11.07□□□□□ -0.64
SSB-209ENST00000470621 C6orf118Q5T5N4 469 aa11.07□□□□□ -0.64
SSB-209ENST00000470621 IRF7Q92985 503 aa11.07□□□□□ -0.64
SSB-209ENST00000470621 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
SSB-209ENST00000470621 GMPRP36959 345 aa11.06□□□□□ -0.64
SSB-209ENST00000470621 EML3Q32P44 896 aa11.06□□□□□ -0.64
SSB-209ENST00000470621 FAM181BA6NEQ2 426 aa11.05□□□□□ -0.64
SSB-209ENST00000470621 H3BM21 787 aa11.05□□□□□ -0.64
SSB-209ENST00000470621 MYCP01106 439 aaPredicted RBP11.05□□□□□ -0.64
SSB-209ENST00000470621 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
SSB-209ENST00000470621 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
SSB-209ENST00000470621 ZNF395Q9H8N7 513 aaPredicted RBP11.05□□□□□ -0.64
SSB-209ENST00000470621 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
SSB-209ENST00000470621 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
SSB-209ENST00000470621 USP4Q13107 963 aa11.04□□□□□ -0.64
SSB-209ENST00000470621 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
SSB-209ENST00000470621 RFX1P22670 979 aa11.03□□□□□ -0.64
SSB-209ENST00000470621 BMP2P12643 396 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
SSB-209ENST00000470621 PTGIRP43119 386 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 VEGFBP49765 207 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 ZSCAN1Q8NBB4 408 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
SSB-209ENST00000470621 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.65
SSB-209ENST00000470621 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
SSB-209ENST00000470621 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
SSB-209ENST00000470621 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
SSB-209ENST00000470621 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
SSB-209ENST00000470621 SPINT1O43278 529 aa11□□□□□ -0.65
SSB-209ENST00000470621 GTF2IP78347 998 aa11□□□□□ -0.65
SSB-209ENST00000470621 CLDN10P78369 228 aa11□□□□□ -0.65
SSB-209ENST00000470621 SCARF1Q14162 830 aa11□□□□□ -0.65
SSB-209ENST00000470621 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
SSB-209ENST00000470621 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
SSB-209ENST00000470621 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
SSB-209ENST00000470621 A0A1W2PRU2 124 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 LZTS3O60299 673 aaPredicted RBP10.99□□□□□ -0.65
SSB-209ENST00000470621 UPP2O95045 317 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 KANK4Q5T7N3 995 aaPredicted RBP10.99□□□□□ -0.65
SSB-209ENST00000470621 SIRT1Q96EB6 747 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 ETNK1Q9HBU6 452 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
SSB-209ENST00000470621 CTSOP43234 321 aaPredicted RBP10.98□□□□□ -0.65
SSB-209ENST00000470621 SCNN1DP51172 638 aa10.98□□□□□ -0.65
SSB-209ENST00000470621 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
SSB-209ENST00000470621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
SSB-209ENST00000470621 SOBPA7XYQ1 873 aa10.97□□□□□ -0.65
SSB-209ENST00000470621 IL2RAP01589 272 aa10.97□□□□□ -0.65
SSB-209ENST00000470621 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
SSB-209ENST00000470621 ARID3AQ99856 593 aa10.97□□□□□ -0.65
SSB-209ENST00000470621 MEN1O00255 615 aa10.96□□□□□ -0.65
SSB-209ENST00000470621 GNRH1P01148 92 aa10.96□□□□□ -0.65
SSB-209ENST00000470621 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
SSB-209ENST00000470621 OGFOD1Q8N543 542 aa10.96□□□□□ -0.65
SSB-209ENST00000470621 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
SSB-209ENST00000470621 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
SSB-209ENST00000470621 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
SSB-209ENST00000470621 GDF10P55107 478 aa10.95□□□□□ -0.66
SSB-209ENST00000470621 CRTC2Q53ET0 693 aaPredicted RBP10.95□□□□□ -0.66
SSB-209ENST00000470621 ZNF594Q96JF6 807 aaPredicted RBP10.95□□□□□ -0.66
SSB-209ENST00000470621 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
SSB-209ENST00000470621 SRPK2P78362 688 aaKnown RBP10.94□□□□□ -0.66
SSB-209ENST00000470621 PSME1Q06323 249 aa10.94□□□□□ -0.66
SSB-209ENST00000470621 CLN3Q13286 438 aa10.94□□□□□ -0.66
SSB-209ENST00000470621 DNMT3LQ9UJW3 386 aa10.94□□□□□ -0.66
SSB-209ENST00000470621 RASA1P20936 1047 aa10.93□□□□□ -0.66
SSB-209ENST00000470621 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
SSB-209ENST00000470621 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms