RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 IL17REQ8NFR9 667 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 RARSP54136 660 aaKnown RBP10.84□□□□□ -0.67
GTF3A-206ENST00000470606 TSPYL6Q8N831 410 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 NLRP2Q9NX02 1062 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
GTF3A-206ENST00000470606 IFT57Q9NWB7 429 aa10.83□□□□□ -0.68
GTF3A-206ENST00000470606 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
GTF3A-206ENST00000470606 CHL1O00533 1208 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 KRT24Q2M2I5 525 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 MAP3K5Q99683 1374 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 GNAT3A8MTJ3 354 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
GTF3A-206ENST00000470606 CERKQ8TCT0 537 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 WDR17Q8IZU2 1322 aa10.82□□□□□ -0.68
GTF3A-206ENST00000470606 CSB-PGBD3P0DP91 1061 aa10.81□□□□□ -0.68
GTF3A-206ENST00000470606 GNAI1P63096 354 aa10.81□□□□□ -0.68
GTF3A-206ENST00000470606 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
GTF3A-206ENST00000470606 C8orf58Q8NAV2 365 aa10.81□□□□□ -0.68
GTF3A-206ENST00000470606 CEMIPQ8WUJ3 1361 aa10.81□□□□□ -0.68
GTF3A-206ENST00000470606 TNNQ9UQP3 1299 aa10.81□□□□□ -0.68
GTF3A-206ENST00000470606 PKD1L3Q7Z443 1732 aa10.8□□□□□ -0.68
GTF3A-206ENST00000470606 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
GTF3A-206ENST00000470606 HTATSF1O43719 755 aaKnown RBP10.8□□□□□ -0.68
GTF3A-206ENST00000470606 VAMP4O75379 141 aa10.8□□□□□ -0.68
GTF3A-206ENST00000470606 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
GTF3A-206ENST00000470606 EXOC6Q8TAG9 804 aa10.8□□□□□ -0.68
GTF3A-206ENST00000470606 SSH1Q8WYL5 1049 aa10.8□□□□□ -0.68
GTF3A-206ENST00000470606 ADAMTS7Q9UKP4 1686 aa10.79□□□□□ -0.68
GTF3A-206ENST00000470606 COL14A1Q05707 1796 aaKnown RBP10.79□□□□□ -0.68
GTF3A-206ENST00000470606 CALD1Q05682 793 aaKnown RBP10.79□□□□□ -0.68
GTF3A-206ENST00000470606 PLEKHO1Q53GL0 409 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-206ENST00000470606 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
GTF3A-206ENST00000470606 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
GTF3A-206ENST00000470606 MPRIPQ6WCQ1 1025 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
GTF3A-206ENST00000470606 SHANK3Q9BYB0 1731 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 CYP27B1O15528 508 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 CRBNQ96SW2 442 aa10.78□□□□□ -0.68
GTF3A-206ENST00000470606 SIPA1L3O60292 1781 aaPredicted RBP10.78□□□□□ -0.68
GTF3A-206ENST00000470606 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.68
GTF3A-206ENST00000470606 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 ADAMTS2O95450 1211 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
GTF3A-206ENST00000470606 RLBP1P12271 317 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 RAPGEF4Q8WZA2 1011 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 CARD10Q9BWT7 1032 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 OVOS2A0A0G2JMS6 1433 aa10.77□□□□□ -0.69
GTF3A-206ENST00000470606 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
GTF3A-206ENST00000470606 NRAPQ86VF7 1730 aa10.76□□□□□ -0.69
GTF3A-206ENST00000470606 KDM3BQ7LBC6 1761 aa10.76□□□□□ -0.69
GTF3A-206ENST00000470606 NUTM2BA6NNL0 878 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 NUTM2EB1AL46 878 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 KCNQ3O43525 872 aa10.76□□□□□ -0.69
GTF3A-206ENST00000470606 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 TWISTNBQ3B726 338 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
GTF3A-206ENST00000470606 NUTM2AQ8IVF1 878 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-206ENST00000470606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■■□□□ 11.9
GTF3A-206ENST00000470606 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
GTF3A-206ENST00000470606 PHKG2P15735 406 aa10.75□□□□□ -0.69
GTF3A-206ENST00000470606 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
GTF3A-206ENST00000470606 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
GTF3A-206ENST00000470606 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
GTF3A-206ENST00000470606 USP35Q9P2H5 1018 aa10.75□□□□□ -0.69
GTF3A-206ENST00000470606 TSPYL4Q9UJ04 414 aa10.75□□□□□ -0.69
GTF3A-206ENST00000470606 EVA1CP58658 441 aa10.74□□□□□ -0.69
GTF3A-206ENST00000470606 TAF7Q15545 349 aaPredicted RBP10.74□□□□□ -0.69
GTF3A-206ENST00000470606 SMC4Q9NTJ3 1288 aa10.74□□□□□ -0.69
GTF3A-206ENST00000470606 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
GTF3A-206ENST00000470606 LRP6O75581 1613 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 HSPA1LP34931 641 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 ALDH1L2Q3SY69 923 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
GTF3A-206ENST00000470606 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 NOB1Q9ULX3 412 aaKnown RBP10.73□□□□□ -0.69
GTF3A-206ENST00000470606 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 SLIT2O94813 1529 aa10.73□□□□□ -0.69
GTF3A-206ENST00000470606 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 SOCS7O14512 581 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 TRIM27P14373 513 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 IL2RBP14784 551 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
GTF3A-206ENST00000470606 PDE3AQ14432 1141 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 JCADQ9P266 1359 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
GTF3A-206ENST00000470606 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.69
GTF3A-206ENST00000470606 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 374.3 ms