RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 NUP188Q5SRE5 1749 aa22.19■■□□□ 1.14
PKDCC-203ENST00000470578 NPC1L1Q9UHC9 1359 aa22.18■■□□□ 1.14
PKDCC-203ENST00000470578 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
PKDCC-203ENST00000470578 CNGB1Q14028 1251 aaPredicted RBP22.18■■□□□ 1.14
PKDCC-203ENST00000470578 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
PKDCC-203ENST00000470578 PSDA5PKW4 1024 aaPredicted RBP22.17■■□□□ 1.14
PKDCC-203ENST00000470578 EIF4A2Q14240 407 aaKnown RBP22.17■■□□□ 1.14
PKDCC-203ENST00000470578 DDX54Q8TDD1 881 aaKnown RBP22.17■■□□□ 1.14
PKDCC-203ENST00000470578 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
PKDCC-203ENST00000470578 BTAF1O14981 1849 aa22.17■■□□□ 1.14
PKDCC-203ENST00000470578 ZCRB1Q8TBF4 217 aaKnown RBP22.16■■□□□ 1.14
PKDCC-203ENST00000470578 EYA1Q99502 592 aa22.15■■□□□ 1.14
PKDCC-203ENST00000470578 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
PKDCC-203ENST00000470578 ACSBG1Q96GR2 724 aa22.14■■□□□ 1.13
PKDCC-203ENST00000470578 PTF1AQ7RTS3 328 aa22.13■■□□□ 1.13
PKDCC-203ENST00000470578 PCDH11XQ9BZA7 1347 aa22.12■■□□□ 1.13
PKDCC-203ENST00000470578 PCDH11YQ9BZA8 1340 aa22.12■■□□□ 1.13
PKDCC-203ENST00000470578 IGSF1Q8N6C5 1336 aa22.11■■□□□ 1.13
PKDCC-203ENST00000470578 KCNQ2O43526 872 aa22.1■■□□□ 1.13
PKDCC-203ENST00000470578 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
PKDCC-203ENST00000470578 MTHFSP49914 203 aa22.09■■□□□ 1.13
PKDCC-203ENST00000470578 R3HDM1Q15032 1099 aaKnown RBP22.09■■□□□ 1.13
PKDCC-203ENST00000470578 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
PKDCC-203ENST00000470578 PLSCR1O15162 318 aa22.06■■□□□ 1.12
PKDCC-203ENST00000470578 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
PKDCC-203ENST00000470578 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
PKDCC-203ENST00000470578 SPG7Q9UQ90 795 aa22.05■■□□□ 1.12
PKDCC-203ENST00000470578 ITGB4P16144 1822 aa22.05■■□□□ 1.12
PKDCC-203ENST00000470578 SRCAPQ6ZRS2 3230 aa22.04■■□□□ 1.12
PKDCC-203ENST00000470578 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
PKDCC-203ENST00000470578 IL13P35225 146 aa22.03■■□□□ 1.12
PKDCC-203ENST00000470578 CYP27B1O15528 508 aa22.02■■□□□ 1.12
PKDCC-203ENST00000470578 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
PKDCC-203ENST00000470578 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
PKDCC-203ENST00000470578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
PKDCC-203ENST00000470578 KDRP35968 1356 aa22■■□□□ 1.11
PKDCC-203ENST00000470578 LY75O60449 1722 aa22■■□□□ 1.11
PKDCC-203ENST00000470578 NBPF14Q5TI25 921 aa22■■□□□ 1.11
PKDCC-203ENST00000470578 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
PKDCC-203ENST00000470578 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
PKDCC-203ENST00000470578 TXNRD1Q16881 649 aa21.98■■□□□ 1.11
PKDCC-203ENST00000470578 PAPPAQ13219 1627 aa21.98■■□□□ 1.11
PKDCC-203ENST00000470578 PHKG2P15735 406 aa21.96■■□□□ 1.11
PKDCC-203ENST00000470578 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
PKDCC-203ENST00000470578 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
PKDCC-203ENST00000470578 PROM2Q8N271 834 aa21.96■■□□□ 1.11
PKDCC-203ENST00000470578 CFAP53Q96M91 514 aa21.96■■□□□ 1.11
PKDCC-203ENST00000470578 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
PKDCC-203ENST00000470578 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
PKDCC-203ENST00000470578 HMOX1P09601 288 aa21.94■■□□□ 1.1
PKDCC-203ENST00000470578 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
PKDCC-203ENST00000470578 AMOTQ4VCS5 1084 aa21.94■■□□□ 1.1
PKDCC-203ENST00000470578 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
PKDCC-203ENST00000470578 ANO8Q9HCE9 1232 aaPredicted RBP21.94■■□□□ 1.1
PKDCC-203ENST00000470578 LRP5O75197 1615 aa21.94■■□□□ 1.1
PKDCC-203ENST00000470578 NKX1-1Q15270 411 aaPredicted RBP21.93■■□□□ 1.1
PKDCC-203ENST00000470578 MPRIPQ6WCQ1 1025 aa21.93■■□□□ 1.1
PKDCC-203ENST00000470578 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
PKDCC-203ENST00000470578 SCN11AQ9UI33 1791 aa21.91■■□□□ 1.1
PKDCC-203ENST00000470578 CASZ1Q86V15 1759 aa21.9■■□□□ 1.1
PKDCC-203ENST00000470578 C1orf141Q5JVX7 400 aa21.9■■□□□ 1.1
PKDCC-203ENST00000470578 C5P01031 1676 aa21.9■■□□□ 1.1
PKDCC-203ENST00000470578 HSP90AB1P08238 724 aaKnown RBP21.89■■□□□ 1.09
PKDCC-203ENST00000470578 STK32BQ9NY57 414 aa21.89■■□□□ 1.09
PKDCC-203ENST00000470578 TMOD3Q9NYL9 352 aa21.89■■□□□ 1.09
PKDCC-203ENST00000470578 TUBGCP6Q96RT7 1819 aa21.89■■□□□ 1.09
PKDCC-203ENST00000470578 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.09
PKDCC-203ENST00000470578 PALLDQ8WX93 1383 aa21.88■■□□□ 1.09
PKDCC-203ENST00000470578 TAF1LQ8IZX4 1826 aa21.88■■□□□ 1.09
PKDCC-203ENST00000470578 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
PKDCC-203ENST00000470578 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
PKDCC-203ENST00000470578 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
PKDCC-203ENST00000470578 LRRC4BQ9NT99 713 aa21.87■■□□□ 1.09
PKDCC-203ENST00000470578 PIGBQ92521 554 aa21.86■■□□□ 1.09
PKDCC-203ENST00000470578 CCNL1Q9UK58 526 aaPredicted RBP21.86■■□□□ 1.09
PKDCC-203ENST00000470578 NUDCQ9Y266 331 aa21.86■■□□□ 1.09
PKDCC-203ENST00000470578 KCNQ4P56696 695 aa21.85■■□□□ 1.09
PKDCC-203ENST00000470578 SLC15A2Q16348 729 aa21.84■■□□□ 1.09
PKDCC-203ENST00000470578 SMARCC1Q92922 1105 aaPredicted RBP21.84■■□□□ 1.09
PKDCC-203ENST00000470578 RALBP1Q15311 655 aa21.83■■□□□ 1.09
PKDCC-203ENST00000470578 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
PKDCC-203ENST00000470578 ZNF827Q17R98 1081 aa21.82■■□□□ 1.08
PKDCC-203ENST00000470578 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
PKDCC-203ENST00000470578 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
PKDCC-203ENST00000470578 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
PKDCC-203ENST00000470578 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
PKDCC-203ENST00000470578 PDGFDQ9GZP0 370 aaPredicted RBP21.81■■□□□ 1.08
PKDCC-203ENST00000470578 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
PKDCC-203ENST00000470578 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
PKDCC-203ENST00000470578 CABP4P57796 275 aa21.8■■□□□ 1.08
PKDCC-203ENST00000470578 MTHFSDQ2M296 383 aaKnown RBP21.8■■□□□ 1.08
PKDCC-203ENST00000470578 MRC1P22897 1456 aa21.79■■□□□ 1.08
PKDCC-203ENST00000470578 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
PKDCC-203ENST00000470578 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
PKDCC-203ENST00000470578 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
PKDCC-203ENST00000470578 GAS2L2Q8NHY3 880 aa21.77■■□□□ 1.08
PKDCC-203ENST00000470578 AKT1S1Q96B36 256 aa21.77■■□□□ 1.08
PKDCC-203ENST00000470578 MYBBP1AQ9BQG0 1328 aaKnown RBP21.77■■□□□ 1.07
PKDCC-203ENST00000470578 MAP3K5Q99683 1374 aa21.76■■□□□ 1.07
PKDCC-203ENST00000470578 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms