RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 KIF20BQ96Q89 1820 aa34.56■■■■□ 3.12
TTC19-204ENST00000470399 PNPLA7Q6ZV29 1317 aa34.55■■■■□ 3.12
TTC19-204ENST00000470399 PRIM1P49642 420 aaKnown RBP34.53■■■■□ 3.12
TTC19-204ENST00000470399 SLC27A3Q5K4L6 730 aa34.53■■■■□ 3.12
TTC19-204ENST00000470399 ZNF784Q8NCA9 323 aaPredicted RBP34.53■■■■□ 3.12
TTC19-204ENST00000470399 AMPHP49418 695 aa34.52■■■■□ 3.12
TTC19-204ENST00000470399 RTL1A6NKG5 1358 aa34.51■■■■□ 3.12
TTC19-204ENST00000470399 RRS1Q15050 365 aaKnown RBP34.51■■■■□ 3.12
TTC19-204ENST00000470399 NBPF6Q5VWK0 638 aa34.49■■■■□ 3.11
TTC19-204ENST00000470399 ZCRB1Q8TBF4 217 aaKnown RBP34.49■■■■□ 3.11
TTC19-204ENST00000470399 SYTL4Q96C24 671 aaPredicted RBP34.49■■■■□ 3.11
TTC19-204ENST00000470399 NBPF4Q96M43 638 aa34.49■■■■□ 3.11
TTC19-204ENST00000470399 FYB1O15117 783 aa34.48■■■■□ 3.11
TTC19-204ENST00000470399 GGNBP2Q9H3C7 697 aa34.47■■■■□ 3.11
TTC19-204ENST00000470399 USHBP1Q8N6Y0 703 aa34.46■■■■□ 3.11
TTC19-204ENST00000470399 TAF1LQ8IZX4 1826 aa34.46■■■■□ 3.11
TTC19-204ENST00000470399 SLC16A10Q8TF71 515 aa34.45■■■■□ 3.11
TTC19-204ENST00000470399 C5P01031 1676 aa34.44■■■■□ 3.1
TTC19-204ENST00000470399 TOGARAM1Q9Y4F4 1720 aa34.44■■■■□ 3.1
TTC19-204ENST00000470399 ITGB4P16144 1822 aa34.42■■■■□ 3.1
TTC19-204ENST00000470399 USP47Q96K76 1375 aa34.42■■■■□ 3.1
TTC19-204ENST00000470399 TFCP2L1Q9NZI6 479 aa34.4■■■■□ 3.1
TTC19-204ENST00000470399 GOLGB1Q14789 3259 aaKnown RBP34.39■■■■□ 3.1
TTC19-204ENST00000470399 SLC24A1O60721 1099 aa34.39■■■■□ 3.1
TTC19-204ENST00000470399 CCNL1Q9UK58 526 aaPredicted RBP34.37■■■■□ 3.09
TTC19-204ENST00000470399 PKD1L3Q7Z443 1732 aa34.37■■■■□ 3.09
TTC19-204ENST00000470399 HSP90AB2PQ58FF8 381 aa34.36■■■■□ 3.09
TTC19-204ENST00000470399 INSRP06213 1382 aa34.36■■■■□ 3.09
TTC19-204ENST00000470399 TMF1P82094 1093 aa34.35■■■■□ 3.09
TTC19-204ENST00000470399 KLHL34Q8N239 644 aa34.35■■■■□ 3.09
TTC19-204ENST00000470399 NLGN2Q8NFZ4 835 aa34.35■■■■□ 3.09
TTC19-204ENST00000470399 ANKRD26Q9UPS8 1709 aa34.35■■■■□ 3.09
TTC19-204ENST00000470399 POLD1P28340 1107 aa34.34■■■■□ 3.09
TTC19-204ENST00000470399 CGNL1Q0VF96 1302 aa34.33■■■■□ 3.09
TTC19-204ENST00000470399 SMG6Q86US8 1419 aaKnown RBP34.33■■■■□ 3.09
TTC19-204ENST00000470399 COL23A1Q86Y22 540 aaPredicted RBP34.32■■■■□ 3.08
TTC19-204ENST00000470399 GPR162Q16538 588 aa34.31■■■■□ 3.08
TTC19-204ENST00000470399 FLT4P35916 1363 aa34.31■■■■□ 3.08
TTC19-204ENST00000470399 RAPGEF4Q8WZA2 1011 aa34.3■■■■□ 3.08
TTC19-204ENST00000470399 CARD14Q9BXL6 1004 aa34.3■■■■□ 3.08
TTC19-204ENST00000470399 MAP2P11137 1827 aaKnown RBP34.3■■■■□ 3.08
TTC19-204ENST00000470399 TATP17735 454 aaPredicted RBP34.28■■■■□ 3.08
TTC19-204ENST00000470399 KIF24Q5T7B8 1368 aa34.27■■■■□ 3.08
TTC19-204ENST00000470399 CYP27B1O15528 508 aa34.27■■■■□ 3.08
TTC19-204ENST00000470399 NCAPD2Q15021 1401 aa34.27■■■■□ 3.08
TTC19-204ENST00000470399 UBR3Q6ZT12 1888 aa34.27■■■■□ 3.08
TTC19-204ENST00000470399 C4BP0C0L5 1744 aa34.26■■■■□ 3.07
TTC19-204ENST00000470399 PCDH11XQ9BZA7 1347 aa34.26■■■■□ 3.07
TTC19-204ENST00000470399 PCDH11YQ9BZA8 1340 aa34.26■■■■□ 3.07
TTC19-204ENST00000470399 EMILIN1Q9Y6C2 1016 aa34.25■■■■□ 3.07
TTC19-204ENST00000470399 NSD3Q9BZ95 1437 aa34.24■■■■□ 3.07
TTC19-204ENST00000470399 PALLDQ8WX93 1383 aa34.23■■■■□ 3.07
TTC19-204ENST00000470399 MSL1Q68DK7 614 aa34.22■■■■□ 3.07
TTC19-204ENST00000470399 YBX3P16989 372 aaKnown RBP eCLIP34.21■■■■□ 3.07
TTC19-204ENST00000470399 PELP1Q8IZL8 1130 aaKnown RBP34.21■■■■□ 3.07
TTC19-204ENST00000470399 MSH5O43196 834 aa34.19■■■■□ 3.06
TTC19-204ENST00000470399 MPRIPQ6WCQ1 1025 aa34.19■■■■□ 3.06
TTC19-204ENST00000470399 AMIGO3Q86WK7 504 aa34.19■■■■□ 3.06
TTC19-204ENST00000470399 C1QTNF8P60827 252 aa34.18■■■■□ 3.06
TTC19-204ENST00000470399 CDCA8Q53HL2 280 aa34.15■■■■□ 3.06
TTC19-204ENST00000470399 PIGBQ92521 554 aa34.12■■■■□ 3.05
TTC19-204ENST00000470399 NKX1-1Q15270 411 aaPredicted RBP34.11■■■■□ 3.05
TTC19-204ENST00000470399 SMIM5Q71RC9 77 aa34.11■■■■□ 3.05
TTC19-204ENST00000470399 SENP3-EIF4A1A0A087X0R7 540 aa34.09■■■■□ 3.05
TTC19-204ENST00000470399 WASHC2AQ641Q2 1341 aa34.08■■■■□ 3.05
TTC19-204ENST00000470399 TRIM26Q12899 539 aaPredicted RBP34.07■■■■□ 3.04
TTC19-204ENST00000470399 EYA1Q99502 592 aa34.07■■■■□ 3.04
TTC19-204ENST00000470399 PPM1GO15355 546 aaPredicted RBP34.06■■■■□ 3.04
TTC19-204ENST00000470399 FLAD1Q8NFF5 587 aa34.05■■■■□ 3.04
TTC19-204ENST00000470399 SMARCC1Q92922 1105 aaPredicted RBP34.05■■■■□ 3.04
TTC19-204ENST00000470399 GRIN3BO60391 1043 aa34.03■■■■□ 3.04
TTC19-204ENST00000470399 POLKQ9UBT6 870 aa34.03■■■■□ 3.04
TTC19-204ENST00000470399 CD2APQ9Y5K6 639 aa34.03■■■■□ 3.04
TTC19-204ENST00000470399 GIGYF1O75420 1035 aaPredicted RBP34.02■■■■□ 3.04
TTC19-204ENST00000470399 LINC00116Q8NCU8 138 aa34.02■■■■□ 3.04
TTC19-204ENST00000470399 AK7Q96M32 723 aa34.01■■■■□ 3.03
TTC19-204ENST00000470399 SPG7Q9UQ90 795 aa34■■■■□ 3.03
TTC19-204ENST00000470399 LOC102724428A0A0B4J2F2 783 aa33.99■■■■□ 3.03
TTC19-204ENST00000470399 PHF14O94880 888 aa33.99■■■■□ 3.03
TTC19-204ENST00000470399 SIK1P57059 783 aa33.99■■■■□ 3.03
TTC19-204ENST00000470399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.98■■■■□ 3.03
TTC19-204ENST00000470399 ITPK1Q13572 414 aa33.98■■■■□ 3.03
TTC19-204ENST00000470399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.98■■■■□ 3.03
TTC19-204ENST00000470399 ASAP1Q9ULH1 1129 aa33.98■■■■□ 3.03
TTC19-204ENST00000470399 PHKG2P15735 406 aa33.97■■■■□ 3.03
TTC19-204ENST00000470399 ATP10DQ9P241 1426 aa33.96■■■■□ 3.03
TTC19-204ENST00000470399 KIAA1551Q9HCM1 1747 aa33.96■■■■□ 3.03
TTC19-204ENST00000470399 EIF4A2Q14240 407 aaKnown RBP33.95■■■■□ 3.03
TTC19-204ENST00000470399 KIF13BQ9NQT8 1826 aa33.95■■■■□ 3.02
TTC19-204ENST00000470399 COL5A3P25940 1745 aaPredicted RBP33.94■■■■□ 3.02
TTC19-204ENST00000470399 HMGB2P26583 209 aaKnown RBP33.94■■■■□ 3.02
TTC19-204ENST00000470399 ADCY9O60503 1353 aa33.94■■■■□ 3.02
TTC19-204ENST00000470399 SSFA2P28290 1259 aa33.93■■■■□ 3.02
TTC19-204ENST00000470399 TMOD3Q9NYL9 352 aa33.93■■■■□ 3.02
TTC19-204ENST00000470399 ZNF831Q5JPB2 1677 aa33.93■■■■□ 3.02
TTC19-204ENST00000470399 KDRP35968 1356 aa33.91■■■■□ 3.02
TTC19-204ENST00000470399 IFNL2Q8IZJ0 200 aa33.91■■■■□ 3.02
TTC19-204ENST00000470399 IGSF1Q8N6C5 1336 aa33.9■■■■□ 3.02
TTC19-204ENST00000470399 ATG3Q9NT62 314 aa33.9■■■■□ 3.02
TTC19-204ENST00000470399 TIMELESSQ9UNS1 1208 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms