RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
SYNGAP1-205ENST00000470232 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-205ENST00000470232 APLP1P51693 650 aa12.74□□□□□ -0.37
SYNGAP1-205ENST00000470232 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-205ENST00000470232 NFAT5O94916 1531 aa12.73□□□□□ -0.37
SYNGAP1-205ENST00000470232 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-205ENST00000470232 KCNQ4P56696 695 aa12.72□□□□□ -0.37
SYNGAP1-205ENST00000470232 COL23A1Q86Y22 540 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-205ENST00000470232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNGAP1-205ENST00000470232 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
SYNGAP1-205ENST00000470232 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
SYNGAP1-205ENST00000470232 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
SYNGAP1-205ENST00000470232 ADCY9O60503 1353 aa12.69□□□□□ -0.38
SYNGAP1-205ENST00000470232 USP47Q96K76 1375 aa12.69□□□□□ -0.38
SYNGAP1-205ENST00000470232 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-205ENST00000470232 TUBGCP6Q96RT7 1819 aa12.68□□□□□ -0.38
SYNGAP1-205ENST00000470232 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-205ENST00000470232 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-205ENST00000470232 IP6K1Q92551 441 aa12.68□□□□□ -0.38
SYNGAP1-205ENST00000470232 KIF3CO14782 793 aa12.67□□□□□ -0.38
SYNGAP1-205ENST00000470232 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-205ENST00000470232 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-205ENST00000470232 LY75O60449 1722 aa12.66□□□□□ -0.38
SYNGAP1-205ENST00000470232 TOMM70O94826 608 aa12.66□□□□□ -0.38
SYNGAP1-205ENST00000470232 NME9Q86XW9 330 aa12.66□□□□□ -0.38
SYNGAP1-205ENST00000470232 LTN1O94822 1766 aa12.66□□□□□ -0.38
SYNGAP1-205ENST00000470232 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
SYNGAP1-205ENST00000470232 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
SYNGAP1-205ENST00000470232 TMC1Q8TDI8 760 aa12.65□□□□□ -0.38
SYNGAP1-205ENST00000470232 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
SYNGAP1-205ENST00000470232 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
SYNGAP1-205ENST00000470232 AK7Q96M32 723 aa12.63□□□□□ -0.39
SYNGAP1-205ENST00000470232 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 NSD2O96028 1365 aa12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 AMPHP49418 695 aa12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
SYNGAP1-205ENST00000470232 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-205ENST00000470232 RAPGEF4Q8WZA2 1011 aa12.61□□□□□ -0.39
SYNGAP1-205ENST00000470232 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-205ENST00000470232 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SYNGAP1-205ENST00000470232 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
SYNGAP1-205ENST00000470232 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
SYNGAP1-205ENST00000470232 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
SYNGAP1-205ENST00000470232 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-205ENST00000470232 HOXC9P31274 260 aa12.59□□□□□ -0.39
SYNGAP1-205ENST00000470232 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-205ENST00000470232 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
SYNGAP1-205ENST00000470232 COG3Q96JB2 828 aa12.59□□□□□ -0.39
SYNGAP1-205ENST00000470232 CAPN15O75808 1086 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 PHF14O94880 888 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 SSFA2P28290 1259 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 TNS4Q8IZW8 715 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
SYNGAP1-205ENST00000470232 C5P01031 1676 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 PRELPP51888 382 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 TGFB2P61812 414 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 FSTL1Q12841 308 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
SYNGAP1-205ENST00000470232 PUS7Q96PZ0 661 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-205ENST00000470232 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
SYNGAP1-205ENST00000470232 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
SYNGAP1-205ENST00000470232 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
SYNGAP1-205ENST00000470232 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
SYNGAP1-205ENST00000470232 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 TAF1LQ8IZX4 1826 aa12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
SYNGAP1-205ENST00000470232 MEGF6O75095 1541 aa12.53□□□□□ -0.4
SYNGAP1-205ENST00000470232 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
SYNGAP1-205ENST00000470232 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
SYNGAP1-205ENST00000470232 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 FCHSD2O94868 740 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 MMP10P09238 476 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 A0A1W2PP64 1363 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 PCNTO95613 3336 aa12.52□□□□□ -0.41
SYNGAP1-205ENST00000470232 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 SIK1P57059 783 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
SYNGAP1-205ENST00000470232 GNPATO15228 680 aa12.5□□□□□ -0.41
SYNGAP1-205ENST00000470232 TMF1P82094 1093 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms