RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 FLT4P35916 1363 aa13.02□□□□□ -0.33
USP30-205ENST00000470117 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
USP30-205ENST00000470117 INSRP06213 1382 aa13□□□□□ -0.33
USP30-205ENST00000470117 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
USP30-205ENST00000470117 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
USP30-205ENST00000470117 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
USP30-205ENST00000470117 NBPF4Q96M43 638 aa13□□□□□ -0.33
USP30-205ENST00000470117 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
USP30-205ENST00000470117 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
USP30-205ENST00000470117 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
USP30-205ENST00000470117 HSP90AB2PQ58FF8 381 aa12.99□□□□□ -0.33
USP30-205ENST00000470117 CARD14Q9BXL6 1004 aa12.99□□□□□ -0.33
USP30-205ENST00000470117 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
USP30-205ENST00000470117 TATP17735 454 aaPredicted RBP12.98□□□□□ -0.33
USP30-205ENST00000470117 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
USP30-205ENST00000470117 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
USP30-205ENST00000470117 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
USP30-205ENST00000470117 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
USP30-205ENST00000470117 PPM1GO15355 546 aaPredicted RBP12.97□□□□□ -0.33
USP30-205ENST00000470117 PTGER2P43116 358 aa12.97□□□□□ -0.33
USP30-205ENST00000470117 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
USP30-205ENST00000470117 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
USP30-205ENST00000470117 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
USP30-205ENST00000470117 NSD2O96028 1365 aa12.96□□□□□ -0.33
USP30-205ENST00000470117 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
USP30-205ENST00000470117 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
USP30-205ENST00000470117 CCER1Q8TC90 406 aaPredicted RBP12.96□□□□□ -0.33
USP30-205ENST00000470117 LY75O60449 1722 aa12.96□□□□□ -0.34
USP30-205ENST00000470117 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
USP30-205ENST00000470117 YY1P25490 414 aa12.94□□□□□ -0.34
USP30-205ENST00000470117 KCNQ4P56696 695 aa12.94□□□□□ -0.34
USP30-205ENST00000470117 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP30-205ENST00000470117 TUBGCP6Q96RT7 1819 aa12.94□□□□□ -0.34
USP30-205ENST00000470117 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
USP30-205ENST00000470117 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
USP30-205ENST00000470117 AKT1S1Q96B36 256 aa12.93□□□□□ -0.34
USP30-205ENST00000470117 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
USP30-205ENST00000470117 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
USP30-205ENST00000470117 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
USP30-205ENST00000470117 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
USP30-205ENST00000470117 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
USP30-205ENST00000470117 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
USP30-205ENST00000470117 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
USP30-205ENST00000470117 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
USP30-205ENST00000470117 ARXQ96QS3 562 aa12.91□□□□□ -0.34
USP30-205ENST00000470117 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
USP30-205ENST00000470117 WASHC2AQ641Q2 1341 aa12.9□□□□□ -0.34
USP30-205ENST00000470117 C5P01031 1676 aa12.9□□□□□ -0.34
USP30-205ENST00000470117 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
USP30-205ENST00000470117 SYT17Q9BSW7 474 aa12.9□□□□□ -0.34
USP30-205ENST00000470117 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
USP30-205ENST00000470117 CYP27B1O15528 508 aa12.89□□□□□ -0.35
USP30-205ENST00000470117 POLD1P28340 1107 aa12.89□□□□□ -0.35
USP30-205ENST00000470117 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
USP30-205ENST00000470117 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
USP30-205ENST00000470117 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
USP30-205ENST00000470117 ITGB4P16144 1822 aa12.88□□□□□ -0.35
USP30-205ENST00000470117 EYA1Q99502 592 aa12.88□□□□□ -0.35
USP30-205ENST00000470117 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
USP30-205ENST00000470117 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
USP30-205ENST00000470117 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
USP30-205ENST00000470117 PANK3Q9H999 370 aa12.87□□□□□ -0.35
USP30-205ENST00000470117 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
USP30-205ENST00000470117 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
USP30-205ENST00000470117 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
USP30-205ENST00000470117 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
USP30-205ENST00000470117 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
USP30-205ENST00000470117 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
USP30-205ENST00000470117 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
USP30-205ENST00000470117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP30-205ENST00000470117 TMOD3Q9NYL9 352 aa12.84□□□□□ -0.35
USP30-205ENST00000470117 PHKG2P15735 406 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
USP30-205ENST00000470117 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
USP30-205ENST00000470117 PIGBQ92521 554 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 AK7Q96M32 723 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
USP30-205ENST00000470117 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
USP30-205ENST00000470117 GPR162Q16538 588 aa12.82□□□□□ -0.36
USP30-205ENST00000470117 KNSTRNQ9Y448 316 aa12.82□□□□□ -0.36
USP30-205ENST00000470117 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
USP30-205ENST00000470117 PHF14O94880 888 aa12.81□□□□□ -0.36
USP30-205ENST00000470117 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
USP30-205ENST00000470117 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
USP30-205ENST00000470117 SIK1P57059 783 aa12.8□□□□□ -0.36
USP30-205ENST00000470117 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
USP30-205ENST00000470117 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
USP30-205ENST00000470117 CHD4Q14839 1912 aa12.8□□□□□ -0.36
USP30-205ENST00000470117 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
USP30-205ENST00000470117 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
USP30-205ENST00000470117 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
USP30-205ENST00000470117 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
USP30-205ENST00000470117 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
USP30-205ENST00000470117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
USP30-205ENST00000470117 GNPATO15228 680 aa12.77□□□□□ -0.37
USP30-205ENST00000470117 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.37
USP30-205ENST00000470117 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
USP30-205ENST00000470117 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms