RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 POLR3GLQ9BT43 218 aa23.42■■□□□ 1.34
C4A-250ENST00000469975 LRRC4BQ9NT99 713 aa23.42■■□□□ 1.34
C4A-250ENST00000469975 ZCRB1Q8TBF4 217 aaKnown RBP23.41■■□□□ 1.34
C4A-250ENST00000469975 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
C4A-250ENST00000469975 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
C4A-250ENST00000469975 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
C4A-250ENST00000469975 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
C4A-250ENST00000469975 MAP2P11137 1827 aaKnown RBP23.4■■□□□ 1.34
C4A-250ENST00000469975 KCNQ4P56696 695 aa23.39■■□□□ 1.33
C4A-250ENST00000469975 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
C4A-250ENST00000469975 INSRP06213 1382 aa23.39■■□□□ 1.33
C4A-250ENST00000469975 FLT4P35916 1363 aa23.39■■□□□ 1.33
C4A-250ENST00000469975 TUBGCP6Q96RT7 1819 aa23.38■■□□□ 1.33
C4A-250ENST00000469975 PTGER2P43116 358 aa23.38■■□□□ 1.33
C4A-250ENST00000469975 LY75O60449 1722 aa23.38■■□□□ 1.33
C4A-250ENST00000469975 NSD2O96028 1365 aa23.38■■□□□ 1.33
C4A-250ENST00000469975 ANKRD26Q9UPS8 1709 aa23.37■■□□□ 1.33
C4A-250ENST00000469975 RAPGEF4Q8WZA2 1011 aa23.35■■□□□ 1.33
C4A-250ENST00000469975 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
C4A-250ENST00000469975 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
C4A-250ENST00000469975 HSPA5P11021 654 aaKnown RBP23.33■■□□□ 1.33
C4A-250ENST00000469975 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.33
C4A-250ENST00000469975 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.32
C4A-250ENST00000469975 TOGARAM1Q9Y4F4 1720 aa23.32■■□□□ 1.32
C4A-250ENST00000469975 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
C4A-250ENST00000469975 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
C4A-250ENST00000469975 MTFR1LQ9H019 292 aa23.31■■□□□ 1.32
C4A-250ENST00000469975 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
C4A-250ENST00000469975 SGIP1Q9BQI5 828 aa23.3■■□□□ 1.32
C4A-250ENST00000469975 CGNL1Q0VF96 1302 aa23.3■■□□□ 1.32
C4A-250ENST00000469975 ITGB4P16144 1822 aa23.29■■□□□ 1.32
C4A-250ENST00000469975 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
C4A-250ENST00000469975 SLC27A3Q5K4L6 730 aa23.29■■□□□ 1.32
C4A-250ENST00000469975 TNNT2P45379 298 aaPredicted RBP23.28■■□□□ 1.32
C4A-250ENST00000469975 FHDC1Q9C0D6 1143 aaPredicted RBP23.27■■□□□ 1.32
C4A-250ENST00000469975 CYP27B1O15528 508 aa23.26■■□□□ 1.31
C4A-250ENST00000469975 POLKQ9UBT6 870 aa23.26■■□□□ 1.31
C4A-250ENST00000469975 PNPLA7Q6ZV29 1317 aa23.26■■□□□ 1.31
C4A-250ENST00000469975 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
C4A-250ENST00000469975 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
C4A-250ENST00000469975 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
C4A-250ENST00000469975 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
C4A-250ENST00000469975 WASHC2AQ641Q2 1341 aa23.25■■□□□ 1.31
C4A-250ENST00000469975 C5P01031 1676 aa23.24■■□□□ 1.31
C4A-250ENST00000469975 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 YY1P25490 414 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 EYA1Q99502 592 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 PANK3Q9H999 370 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 TFCP2L1Q9NZI6 479 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 TAF1LQ8IZX4 1826 aa23.23■■□□□ 1.31
C4A-250ENST00000469975 ARXQ96QS3 562 aa23.22■■□□□ 1.31
C4A-250ENST00000469975 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
C4A-250ENST00000469975 MPRIPQ6WCQ1 1025 aa23.21■■□□□ 1.31
C4A-250ENST00000469975 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
C4A-250ENST00000469975 EIF4A2Q14240 407 aaKnown RBP23.19■■□□□ 1.3
C4A-250ENST00000469975 PALLDQ8WX93 1383 aa23.17■■□□□ 1.3
C4A-250ENST00000469975 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
C4A-250ENST00000469975 MSH5O43196 834 aa23.15■■□□□ 1.3
C4A-250ENST00000469975 COL23A1Q86Y22 540 aaPredicted RBP23.15■■□□□ 1.3
C4A-250ENST00000469975 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
C4A-250ENST00000469975 PIGBQ92521 554 aa23.15■■□□□ 1.3
C4A-250ENST00000469975 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
C4A-250ENST00000469975 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
C4A-250ENST00000469975 C4BP0C0L5 1744 aa23.13■■□□□ 1.29
C4A-250ENST00000469975 POLD1P28340 1107 aa23.11■■□□□ 1.29
C4A-250ENST00000469975 MSL1Q68DK7 614 aa23.11■■□□□ 1.29
C4A-250ENST00000469975 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
C4A-250ENST00000469975 PHKG2P15735 406 aa23.1■■□□□ 1.29
C4A-250ENST00000469975 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
C4A-250ENST00000469975 UBR3Q6ZT12 1888 aa23.09■■□□□ 1.29
C4A-250ENST00000469975 MORC1Q86VD1 984 aa23.09■■□□□ 1.29
C4A-250ENST00000469975 AMIGO3Q86WK7 504 aa23.09■■□□□ 1.29
C4A-250ENST00000469975 CHD4Q14839 1912 aa23.09■■□□□ 1.29
C4A-250ENST00000469975 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
C4A-250ENST00000469975 IFNL2Q8IZJ0 200 aa23.08■■□□□ 1.29
C4A-250ENST00000469975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.08■■□□□ 1.29
C4A-250ENST00000469975 NLGN2Q8NFZ4 835 aa23.07■■□□□ 1.28
C4A-250ENST00000469975 SMARCC1Q92922 1105 aaPredicted RBP23.07■■□□□ 1.28
C4A-250ENST00000469975 TMOD3Q9NYL9 352 aa23.07■■□□□ 1.28
C4A-250ENST00000469975 ASAP1Q9ULH1 1129 aa23.07■■□□□ 1.28
C4A-250ENST00000469975 KIF7Q2M1P5 1343 aa23.07■■□□□ 1.28
C4A-250ENST00000469975 UTRNP46939 3433 aa23.05■■□□□ 1.28
C4A-250ENST00000469975 AEBP1Q8IUX7 1158 aa23.05■■□□□ 1.28
C4A-250ENST00000469975 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
C4A-250ENST00000469975 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
C4A-250ENST00000469975 LOC102724428A0A0B4J2F2 783 aa23.03■■□□□ 1.28
C4A-250ENST00000469975 PHF14O94880 888 aa23.03■■□□□ 1.28
C4A-250ENST00000469975 SIK1P57059 783 aa23.03■■□□□ 1.28
C4A-250ENST00000469975 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
C4A-250ENST00000469975 AK7Q96M32 723 aa23.03■■□□□ 1.28
C4A-250ENST00000469975 ITPK1Q13572 414 aa23.02■■□□□ 1.28
C4A-250ENST00000469975 GPR162Q16538 588 aa23.02■■□□□ 1.28
C4A-250ENST00000469975 ATG3Q9NT62 314 aa23.02■■□□□ 1.28
C4A-250ENST00000469975 AMER1Q5JTC6 1135 aaPredicted RBP23.01■■□□□ 1.27
C4A-250ENST00000469975 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
C4A-250ENST00000469975 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
C4A-250ENST00000469975 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
C4A-250ENST00000469975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
C4A-250ENST00000469975 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
C4A-250ENST00000469975 FLAD1Q8NFF5 587 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms