RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 COL24A1Q17RW2 1714 aa16.65■□□□□ 0.26
COMMD2-202ENST00000469896 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
COMMD2-202ENST00000469896 CCDC7Q96M83 1385 aa16.64■□□□□ 0.26
COMMD2-202ENST00000469896 NLRP6P59044 892 aa16.64■□□□□ 0.25
COMMD2-202ENST00000469896 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
COMMD2-202ENST00000469896 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
COMMD2-202ENST00000469896 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
COMMD2-202ENST00000469896 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
COMMD2-202ENST00000469896 ABCC6O95255 1503 aa16.6■□□□□ 0.25
COMMD2-202ENST00000469896 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
COMMD2-202ENST00000469896 EVX2Q03828 476 aa16.6■□□□□ 0.25
COMMD2-202ENST00000469896 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
COMMD2-202ENST00000469896 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
COMMD2-202ENST00000469896 PCNTO95613 3336 aa16.59■□□□□ 0.25
COMMD2-202ENST00000469896 SLIT3O75094 1523 aa16.59■□□□□ 0.25
COMMD2-202ENST00000469896 BTAF1O14981 1849 aa16.58■□□□□ 0.24
COMMD2-202ENST00000469896 ARHGEF28Q8N1W1 1705 aaKnown RBP16.57■□□□□ 0.24
COMMD2-202ENST00000469896 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
COMMD2-202ENST00000469896 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
COMMD2-202ENST00000469896 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
COMMD2-202ENST00000469896 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
COMMD2-202ENST00000469896 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
COMMD2-202ENST00000469896 MSL1Q68DK7 614 aa16.56■□□□□ 0.24
COMMD2-202ENST00000469896 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
COMMD2-202ENST00000469896 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
COMMD2-202ENST00000469896 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
COMMD2-202ENST00000469896 COL18A1P39060 1754 aa16.54■□□□□ 0.24
COMMD2-202ENST00000469896 IL2RBP14784 551 aa16.54■□□□□ 0.24
COMMD2-202ENST00000469896 HTRA3P83110 453 aa16.54■□□□□ 0.24
COMMD2-202ENST00000469896 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
COMMD2-202ENST00000469896 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
COMMD2-202ENST00000469896 FSTL1Q12841 308 aa16.53■□□□□ 0.24
COMMD2-202ENST00000469896 COL23A1Q86Y22 540 aaPredicted RBP16.53■□□□□ 0.24
COMMD2-202ENST00000469896 KCNQ4P56696 695 aa16.52■□□□□ 0.24
COMMD2-202ENST00000469896 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
COMMD2-202ENST00000469896 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
COMMD2-202ENST00000469896 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
COMMD2-202ENST00000469896 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
COMMD2-202ENST00000469896 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
COMMD2-202ENST00000469896 SOX12O15370 315 aa16.5■□□□□ 0.23
COMMD2-202ENST00000469896 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
COMMD2-202ENST00000469896 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
COMMD2-202ENST00000469896 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
COMMD2-202ENST00000469896 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
COMMD2-202ENST00000469896 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
COMMD2-202ENST00000469896 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
COMMD2-202ENST00000469896 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
COMMD2-202ENST00000469896 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
COMMD2-202ENST00000469896 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
COMMD2-202ENST00000469896 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
COMMD2-202ENST00000469896 ERBB3P21860 1342 aa16.45■□□□□ 0.22
COMMD2-202ENST00000469896 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
COMMD2-202ENST00000469896 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
COMMD2-202ENST00000469896 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
COMMD2-202ENST00000469896 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
COMMD2-202ENST00000469896 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
COMMD2-202ENST00000469896 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
COMMD2-202ENST00000469896 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
COMMD2-202ENST00000469896 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
COMMD2-202ENST00000469896 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
COMMD2-202ENST00000469896 USP47Q96K76 1375 aa16.41■□□□□ 0.22
COMMD2-202ENST00000469896 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
COMMD2-202ENST00000469896 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
COMMD2-202ENST00000469896 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
COMMD2-202ENST00000469896 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
COMMD2-202ENST00000469896 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
COMMD2-202ENST00000469896 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.21
COMMD2-202ENST00000469896 LY75O60449 1722 aa16.39■□□□□ 0.21
COMMD2-202ENST00000469896 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
COMMD2-202ENST00000469896 NFAT5O94916 1531 aa16.38■□□□□ 0.21
COMMD2-202ENST00000469896 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
COMMD2-202ENST00000469896 NSD2O96028 1365 aa16.37■□□□□ 0.21
COMMD2-202ENST00000469896 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
COMMD2-202ENST00000469896 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
COMMD2-202ENST00000469896 AK7Q96M32 723 aa16.35■□□□□ 0.21
COMMD2-202ENST00000469896 CENPJQ9HC77 1338 aaPredicted RBP16.35■□□□□ 0.21
COMMD2-202ENST00000469896 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
COMMD2-202ENST00000469896 TGFB2P61812 414 aa16.33■□□□□ 0.2
COMMD2-202ENST00000469896 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
COMMD2-202ENST00000469896 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
COMMD2-202ENST00000469896 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
COMMD2-202ENST00000469896 PHF14O94880 888 aa16.31■□□□□ 0.2
COMMD2-202ENST00000469896 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
COMMD2-202ENST00000469896 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
COMMD2-202ENST00000469896 FCHSD2O94868 740 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 C5P01031 1676 aa16.3■□□□□ 0.2
COMMD2-202ENST00000469896 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
COMMD2-202ENST00000469896 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
COMMD2-202ENST00000469896 SSFA2P28290 1259 aa16.28■□□□□ 0.2
COMMD2-202ENST00000469896 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
COMMD2-202ENST00000469896 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
COMMD2-202ENST00000469896 USP54Q70EL1 1684 aa16.27■□□□□ 0.19
COMMD2-202ENST00000469896 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
COMMD2-202ENST00000469896 MMP10P09238 476 aa16.26■□□□□ 0.19
COMMD2-202ENST00000469896 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
COMMD2-202ENST00000469896 MLLT1Q03111 559 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms