RNA–Protein interactions for RNA: ENST00000469888.1

SUMF1-206, Transcript of sulfatase modifying factor 1, humanhuman

TSL 4

Gene SUMF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-206ENST00000469888 CGNL1Q0VF96 1302 aa26.18■■□□□ 1.78
SUMF1-206ENST00000469888 RRS1Q15050 365 aaKnown RBP26.18■■□□□ 1.78
SUMF1-206ENST00000469888 CDCA8Q53HL2 280 aa26.18■■□□□ 1.78
SUMF1-206ENST00000469888 ZCRB1Q8TBF4 217 aaKnown RBP26.18■■□□□ 1.78
SUMF1-206ENST00000469888 SYT17Q9BSW7 474 aa26.18■■□□□ 1.78
SUMF1-206ENST00000469888 GGNBP2Q9H3C7 697 aa26.18■■□□□ 1.78
SUMF1-206ENST00000469888 NBPF6Q5VWK0 638 aa26.17■■□□□ 1.78
SUMF1-206ENST00000469888 NBPF4Q96M43 638 aa26.17■■□□□ 1.78
SUMF1-206ENST00000469888 FHDC1Q9C0D6 1143 aaPredicted RBP26.17■■□□□ 1.78
SUMF1-206ENST00000469888 LY75O60449 1722 aa26.17■■□□□ 1.78
SUMF1-206ENST00000469888 COL24A1Q17RW2 1714 aa26.17■■□□□ 1.78
SUMF1-206ENST00000469888 INSRP06213 1382 aa26.16■■□□□ 1.78
SUMF1-206ENST00000469888 KAT6BQ8WYB5 2073 aa26.15■■□□□ 1.78
SUMF1-206ENST00000469888 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
SUMF1-206ENST00000469888 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.78
SUMF1-206ENST00000469888 PRIM1P49642 420 aaKnown RBP26.14■■□□□ 1.78
SUMF1-206ENST00000469888 FLT4P35916 1363 aa26.14■■□□□ 1.78
SUMF1-206ENST00000469888 SLC16A10Q8TF71 515 aa26.13■■□□□ 1.77
SUMF1-206ENST00000469888 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
SUMF1-206ENST00000469888 ARXQ96QS3 562 aa26.12■■□□□ 1.77
SUMF1-206ENST00000469888 PNPLA7Q6ZV29 1317 aa26.12■■□□□ 1.77
SUMF1-206ENST00000469888 NCAPD2Q15021 1401 aa26.11■■□□□ 1.77
SUMF1-206ENST00000469888 TUBGCP6Q96RT7 1819 aa26.1■■□□□ 1.77
SUMF1-206ENST00000469888 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
SUMF1-206ENST00000469888 HSP90AB2PQ58FF8 381 aa26.09■■□□□ 1.77
SUMF1-206ENST00000469888 SYTL4Q96C24 671 aaPredicted RBP26.09■■□□□ 1.77
SUMF1-206ENST00000469888 USHBP1Q8N6Y0 703 aa26.08■■□□□ 1.77
SUMF1-206ENST00000469888 RAPGEF4Q8WZA2 1011 aa26.08■■□□□ 1.77
SUMF1-206ENST00000469888 NSD3Q9BZ95 1437 aa26.07■■□□□ 1.76
SUMF1-206ENST00000469888 ANKRD26Q9UPS8 1709 aa26.07■■□□□ 1.76
SUMF1-206ENST00000469888 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
SUMF1-206ENST00000469888 TATP17735 454 aaPredicted RBP26.05■■□□□ 1.76
SUMF1-206ENST00000469888 PCDH11XQ9BZA7 1347 aa26.05■■□□□ 1.76
SUMF1-206ENST00000469888 PCDH11YQ9BZA8 1340 aa26.05■■□□□ 1.76
SUMF1-206ENST00000469888 PKD1L3Q7Z443 1732 aa26.03■■□□□ 1.76
SUMF1-206ENST00000469888 KCNQ4P56696 695 aa26.03■■□□□ 1.76
SUMF1-206ENST00000469888 TFCP2L1Q9NZI6 479 aa26.03■■□□□ 1.76
SUMF1-206ENST00000469888 CCNL1Q9UK58 526 aaPredicted RBP26.03■■□□□ 1.76
SUMF1-206ENST00000469888 EMILIN1Q9Y6C2 1016 aa26.01■■□□□ 1.75
SUMF1-206ENST00000469888 CYP27B1O15528 508 aa26■■□□□ 1.75
SUMF1-206ENST00000469888 GOLGB1Q14789 3259 aaKnown RBP26■■□□□ 1.75
SUMF1-206ENST00000469888 POLD1P28340 1107 aa25.99■■□□□ 1.75
SUMF1-206ENST00000469888 TOGARAM1Q9Y4F4 1720 aa25.99■■□□□ 1.75
SUMF1-206ENST00000469888 WASHC2AQ641Q2 1341 aa25.97■■□□□ 1.75
SUMF1-206ENST00000469888 C5P01031 1676 aa25.96■■□□□ 1.75
SUMF1-206ENST00000469888 CHD4Q14839 1912 aa25.96■■□□□ 1.75
SUMF1-206ENST00000469888 ZNF784Q8NCA9 323 aaPredicted RBP25.96■■□□□ 1.75
SUMF1-206ENST00000469888 PALLDQ8WX93 1383 aa25.95■■□□□ 1.75
SUMF1-206ENST00000469888 HMGB2P26583 209 aaKnown RBP25.95■■□□□ 1.74
SUMF1-206ENST00000469888 NKX1-1Q15270 411 aaPredicted RBP25.95■■□□□ 1.74
SUMF1-206ENST00000469888 COL23A1Q86Y22 540 aaPredicted RBP25.94■■□□□ 1.74
SUMF1-206ENST00000469888 PLEKHG2Q9H7P9 1386 aa25.94■■□□□ 1.74
SUMF1-206ENST00000469888 TAF1LQ8IZX4 1826 aa25.93■■□□□ 1.74
SUMF1-206ENST00000469888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.92■■□□□ 1.74
SUMF1-206ENST00000469888 ITGB4P16144 1822 aa25.91■■□□□ 1.74
SUMF1-206ENST00000469888 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
SUMF1-206ENST00000469888 MPRIPQ6WCQ1 1025 aa25.89■■□□□ 1.74
SUMF1-206ENST00000469888 SMARCC1Q92922 1105 aaPredicted RBP25.89■■□□□ 1.74
SUMF1-206ENST00000469888 EYA1Q99502 592 aa25.89■■□□□ 1.74
SUMF1-206ENST00000469888 MAP2P11137 1827 aaKnown RBP25.88■■□□□ 1.73
SUMF1-206ENST00000469888 FLAD1Q8NFF5 587 aa25.88■■□□□ 1.73
SUMF1-206ENST00000469888 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
SUMF1-206ENST00000469888 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
SUMF1-206ENST00000469888 PIGBQ92521 554 aa25.87■■□□□ 1.73
SUMF1-206ENST00000469888 SPG7Q9UQ90 795 aa25.87■■□□□ 1.73
SUMF1-206ENST00000469888 GPR162Q16538 588 aa25.86■■□□□ 1.73
SUMF1-206ENST00000469888 PPM1GO15355 546 aaPredicted RBP25.85■■□□□ 1.73
SUMF1-206ENST00000469888 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
SUMF1-206ENST00000469888 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
SUMF1-206ENST00000469888 UBR3Q6ZT12 1888 aa25.82■■□□□ 1.72
SUMF1-206ENST00000469888 PHKG2P15735 406 aa25.81■■□□□ 1.72
SUMF1-206ENST00000469888 AMIGO3Q86WK7 504 aa25.81■■□□□ 1.72
SUMF1-206ENST00000469888 IGSF1Q8N6C5 1336 aa25.81■■□□□ 1.72
SUMF1-206ENST00000469888 MSH5O43196 834 aa25.8■■□□□ 1.72
SUMF1-206ENST00000469888 IFNL2Q8IZJ0 200 aa25.8■■□□□ 1.72
SUMF1-206ENST00000469888 EIF4G2P78344 907 aaKnown RBP eCLIP25.79■■□□□ 1.72
SUMF1-206ENST00000469888 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
SUMF1-206ENST00000469888 CD2APQ9Y5K6 639 aa25.79■■□□□ 1.72
SUMF1-206ENST00000469888 LOC102724428A0A0B4J2F2 783 aa25.78■■□□□ 1.72
SUMF1-206ENST00000469888 SIK1P57059 783 aa25.78■■□□□ 1.72
SUMF1-206ENST00000469888 AK7Q96M32 723 aa25.78■■□□□ 1.72
SUMF1-206ENST00000469888 HSPA5P11021 654 aaKnown RBP25.77■■□□□ 1.72
SUMF1-206ENST00000469888 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
SUMF1-206ENST00000469888 SSFA2P28290 1259 aa25.77■■□□□ 1.72
SUMF1-206ENST00000469888 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
SUMF1-206ENST00000469888 TMOD3Q9NYL9 352 aa25.77■■□□□ 1.72
SUMF1-206ENST00000469888 KDRP35968 1356 aa25.75■■□□□ 1.71
SUMF1-206ENST00000469888 GRIN3BO60391 1043 aa25.75■■□□□ 1.71
SUMF1-206ENST00000469888 LINC00116Q8NCU8 138 aa25.75■■□□□ 1.71
SUMF1-206ENST00000469888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.74■■□□□ 1.71
SUMF1-206ENST00000469888 PANK3Q9H999 370 aa25.74■■□□□ 1.71
SUMF1-206ENST00000469888 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
SUMF1-206ENST00000469888 ZNF831Q5JPB2 1677 aa25.74■■□□□ 1.71
SUMF1-206ENST00000469888 PELP1Q8IZL8 1130 aaKnown RBP25.73■■□□□ 1.71
SUMF1-206ENST00000469888 ITPK1Q13572 414 aa25.72■■□□□ 1.71
SUMF1-206ENST00000469888 POLR3GLQ9BT43 218 aa25.72■■□□□ 1.71
SUMF1-206ENST00000469888 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
SUMF1-206ENST00000469888 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
SUMF1-206ENST00000469888 C1QTNF8P60827 252 aa25.7■■□□□ 1.7
SUMF1-206ENST00000469888 ERVV-2B6SEH9 535 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms