RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 POLR3GLQ9BT43 218 aa18.8■□□□□ 0.6
EFNA1-203ENST00000469878 LRRC4BQ9NT99 713 aa18.8■□□□□ 0.6
EFNA1-203ENST00000469878 STK32BQ9NY57 414 aa18.8■□□□□ 0.6
EFNA1-203ENST00000469878 INSRP06213 1382 aa18.8■□□□□ 0.6
EFNA1-203ENST00000469878 FLT4P35916 1363 aa18.8■□□□□ 0.6
EFNA1-203ENST00000469878 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
EFNA1-203ENST00000469878 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
EFNA1-203ENST00000469878 ZNF827Q17R98 1081 aa18.78■□□□□ 0.6
EFNA1-203ENST00000469878 LY75O60449 1722 aa18.77■□□□□ 0.6
EFNA1-203ENST00000469878 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.6
EFNA1-203ENST00000469878 KCNQ4P56696 695 aa18.77■□□□□ 0.6
EFNA1-203ENST00000469878 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
EFNA1-203ENST00000469878 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
EFNA1-203ENST00000469878 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.6
EFNA1-203ENST00000469878 PPP1R1BQ9UD71 204 aaPredicted RBP18.77■□□□□ 0.6
EFNA1-203ENST00000469878 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.59
EFNA1-203ENST00000469878 HSPA5P11021 654 aaKnown RBP18.76■□□□□ 0.59
EFNA1-203ENST00000469878 PTGER2P43116 358 aa18.76■□□□□ 0.59
EFNA1-203ENST00000469878 PRIM1P49642 420 aaKnown RBP18.76■□□□□ 0.59
EFNA1-203ENST00000469878 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
EFNA1-203ENST00000469878 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
EFNA1-203ENST00000469878 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
EFNA1-203ENST00000469878 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
EFNA1-203ENST00000469878 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
EFNA1-203ENST00000469878 QSER1Q2KHR3 1735 aa18.72■□□□□ 0.59
EFNA1-203ENST00000469878 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
EFNA1-203ENST00000469878 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
EFNA1-203ENST00000469878 TATP17735 454 aaPredicted RBP18.71■□□□□ 0.59
EFNA1-203ENST00000469878 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
EFNA1-203ENST00000469878 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
EFNA1-203ENST00000469878 ITGB4P16144 1822 aa18.7■□□□□ 0.58
EFNA1-203ENST00000469878 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
EFNA1-203ENST00000469878 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
EFNA1-203ENST00000469878 CYP27B1O15528 508 aa18.69■□□□□ 0.58
EFNA1-203ENST00000469878 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
EFNA1-203ENST00000469878 POLKQ9UBT6 870 aa18.68■□□□□ 0.58
EFNA1-203ENST00000469878 PNPLA7Q6ZV29 1317 aa18.68■□□□□ 0.58
EFNA1-203ENST00000469878 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
EFNA1-203ENST00000469878 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
EFNA1-203ENST00000469878 C5P01031 1676 aa18.67■□□□□ 0.58
EFNA1-203ENST00000469878 SLC27A3Q5K4L6 730 aa18.67■□□□□ 0.58
EFNA1-203ENST00000469878 PANK3Q9H999 370 aa18.67■□□□□ 0.58
EFNA1-203ENST00000469878 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
EFNA1-203ENST00000469878 COL24A1Q17RW2 1714 aa18.66■□□□□ 0.58
EFNA1-203ENST00000469878 EYA1Q99502 592 aa18.65■□□□□ 0.58
EFNA1-203ENST00000469878 FHDC1Q9C0D6 1143 aaPredicted RBP18.65■□□□□ 0.58
EFNA1-203ENST00000469878 CCNL1Q9UK58 526 aaPredicted RBP18.65■□□□□ 0.58
EFNA1-203ENST00000469878 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
EFNA1-203ENST00000469878 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
EFNA1-203ENST00000469878 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
EFNA1-203ENST00000469878 SYT17Q9BSW7 474 aa18.62■□□□□ 0.57
EFNA1-203ENST00000469878 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
EFNA1-203ENST00000469878 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
EFNA1-203ENST00000469878 ARXQ96QS3 562 aa18.6■□□□□ 0.57
EFNA1-203ENST00000469878 C4BP0C0L5 1744 aa18.58■□□□□ 0.57
EFNA1-203ENST00000469878 YY1P25490 414 aa18.58■□□□□ 0.56
EFNA1-203ENST00000469878 PIGBQ92521 554 aa18.58■□□□□ 0.56
EFNA1-203ENST00000469878 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
EFNA1-203ENST00000469878 COL23A1Q86Y22 540 aaPredicted RBP18.57■□□□□ 0.56
EFNA1-203ENST00000469878 SPG7Q9UQ90 795 aa18.57■□□□□ 0.56
EFNA1-203ENST00000469878 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
EFNA1-203ENST00000469878 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
EFNA1-203ENST00000469878 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
EFNA1-203ENST00000469878 UBR3Q6ZT12 1888 aa18.55■□□□□ 0.56
EFNA1-203ENST00000469878 PHKG2P15735 406 aa18.55■□□□□ 0.56
EFNA1-203ENST00000469878 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
EFNA1-203ENST00000469878 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
EFNA1-203ENST00000469878 UTRNP46939 3433 aa18.55■□□□□ 0.56
EFNA1-203ENST00000469878 MSH5O43196 834 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
EFNA1-203ENST00000469878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
EFNA1-203ENST00000469878 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
EFNA1-203ENST00000469878 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
EFNA1-203ENST00000469878 POLD1P28340 1107 aa18.51■□□□□ 0.55
EFNA1-203ENST00000469878 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
EFNA1-203ENST00000469878 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
EFNA1-203ENST00000469878 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
EFNA1-203ENST00000469878 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
EFNA1-203ENST00000469878 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
EFNA1-203ENST00000469878 KDM6AO15550 1401 aaPredicted RBP18.5■□□□□ 0.55
EFNA1-203ENST00000469878 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
EFNA1-203ENST00000469878 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
EFNA1-203ENST00000469878 ITPK1Q13572 414 aa18.49■□□□□ 0.55
EFNA1-203ENST00000469878 LOC102724428A0A0B4J2F2 783 aa18.48■□□□□ 0.55
EFNA1-203ENST00000469878 PHF14O94880 888 aa18.48■□□□□ 0.55
EFNA1-203ENST00000469878 SIK1P57059 783 aa18.48■□□□□ 0.55
EFNA1-203ENST00000469878 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
EFNA1-203ENST00000469878 CHD4Q14839 1912 aa18.47■□□□□ 0.55
EFNA1-203ENST00000469878 AK7Q96M32 723 aa18.47■□□□□ 0.55
EFNA1-203ENST00000469878 KDRP35968 1356 aa18.46■□□□□ 0.55
EFNA1-203ENST00000469878 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
EFNA1-203ENST00000469878 IL13P35225 146 aa18.46■□□□□ 0.55
EFNA1-203ENST00000469878 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
EFNA1-203ENST00000469878 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
EFNA1-203ENST00000469878 SLC4A9Q96Q91 983 aa18.45■□□□□ 0.54
EFNA1-203ENST00000469878 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms