RNA–Protein interactions for RNA: ENST00000469848.1

ITSN2-210, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-210ENST00000469848 IL13P35225 146 aa17.51■□□□□ 0.39
ITSN2-210ENST00000469848 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
ITSN2-210ENST00000469848 SHANK3Q9BYB0 1731 aa17.51■□□□□ 0.39
ITSN2-210ENST00000469848 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
ITSN2-210ENST00000469848 BCL9O00512 1426 aa17.5■□□□□ 0.39
ITSN2-210ENST00000469848 ZCRB1Q8TBF4 217 aaKnown RBP17.5■□□□□ 0.39
ITSN2-210ENST00000469848 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
ITSN2-210ENST00000469848 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
ITSN2-210ENST00000469848 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
ITSN2-210ENST00000469848 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
ITSN2-210ENST00000469848 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
ITSN2-210ENST00000469848 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
ITSN2-210ENST00000469848 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
ITSN2-210ENST00000469848 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
ITSN2-210ENST00000469848 PCDH11XQ9BZA7 1347 aa17.46■□□□□ 0.38
ITSN2-210ENST00000469848 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.38
ITSN2-210ENST00000469848 KDRP35968 1356 aa17.45■□□□□ 0.38
ITSN2-210ENST00000469848 BAG6P46379 1132 aa17.45■□□□□ 0.38
ITSN2-210ENST00000469848 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
ITSN2-210ENST00000469848 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
ITSN2-210ENST00000469848 APBA3O96018 575 aa17.44■□□□□ 0.38
ITSN2-210ENST00000469848 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
ITSN2-210ENST00000469848 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 CYP27B1O15528 508 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 KCNQ2O43526 872 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 HMOX1P09601 288 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
ITSN2-210ENST00000469848 RALBP1Q15311 655 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
ITSN2-210ENST00000469848 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
ITSN2-210ENST00000469848 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
ITSN2-210ENST00000469848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■■■□ 20.3
ITSN2-210ENST00000469848 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
ITSN2-210ENST00000469848 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
ITSN2-210ENST00000469848 PLEKHO1Q53GL0 409 aaPredicted RBP17.39■□□□□ 0.37
ITSN2-210ENST00000469848 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
ITSN2-210ENST00000469848 PHKG2P15735 406 aa17.38■□□□□ 0.37
ITSN2-210ENST00000469848 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
ITSN2-210ENST00000469848 MYBBP1AQ9BQG0 1328 aaKnown RBP17.38■□□□□ 0.37
ITSN2-210ENST00000469848 PRIM1P49642 420 aaKnown RBP17.37■□□□□ 0.37
ITSN2-210ENST00000469848 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
ITSN2-210ENST00000469848 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
ITSN2-210ENST00000469848 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
ITSN2-210ENST00000469848 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
ITSN2-210ENST00000469848 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
ITSN2-210ENST00000469848 TOGARAM1Q9Y4F4 1720 aa17.37■□□□□ 0.37
ITSN2-210ENST00000469848 BTAF1O14981 1849 aa17.36■□□□□ 0.37
ITSN2-210ENST00000469848 NKX1-1Q15270 411 aaPredicted RBP17.36■□□□□ 0.37
ITSN2-210ENST00000469848 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
ITSN2-210ENST00000469848 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
ITSN2-210ENST00000469848 PLSCR1O15162 318 aa17.35■□□□□ 0.37
ITSN2-210ENST00000469848 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
ITSN2-210ENST00000469848 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
ITSN2-210ENST00000469848 RREB1Q92766 1687 aa17.35■□□□□ 0.37
ITSN2-210ENST00000469848 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
ITSN2-210ENST00000469848 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.36
ITSN2-210ENST00000469848 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
ITSN2-210ENST00000469848 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
ITSN2-210ENST00000469848 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
ITSN2-210ENST00000469848 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
ITSN2-210ENST00000469848 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
ITSN2-210ENST00000469848 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
ITSN2-210ENST00000469848 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
ITSN2-210ENST00000469848 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
ITSN2-210ENST00000469848 PROM2Q8N271 834 aa17.3■□□□□ 0.36
ITSN2-210ENST00000469848 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
ITSN2-210ENST00000469848 ITGB4P16144 1822 aa17.29■□□□□ 0.36
ITSN2-210ENST00000469848 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
ITSN2-210ENST00000469848 FCHSD2O94868 740 aa17.28■□□□□ 0.36
ITSN2-210ENST00000469848 PIGBQ92521 554 aa17.28■□□□□ 0.36
ITSN2-210ENST00000469848 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
ITSN2-210ENST00000469848 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
ITSN2-210ENST00000469848 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
ITSN2-210ENST00000469848 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
ITSN2-210ENST00000469848 ANP32CO43423 234 aa17.25■□□□□ 0.35
ITSN2-210ENST00000469848 PALLDQ8WX93 1383 aa17.25■□□□□ 0.35
ITSN2-210ENST00000469848 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
ITSN2-210ENST00000469848 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
ITSN2-210ENST00000469848 LY75O60449 1722 aa17.24■□□□□ 0.35
ITSN2-210ENST00000469848 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
ITSN2-210ENST00000469848 CABP4P57796 275 aa17.24■□□□□ 0.35
ITSN2-210ENST00000469848 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
ITSN2-210ENST00000469848 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
ITSN2-210ENST00000469848 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
ITSN2-210ENST00000469848 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 RNMTO43148 476 aaKnown RBP17.23■□□□□ 0.35
ITSN2-210ENST00000469848 KCNQ4P56696 695 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 R3HDM1Q15032 1099 aaKnown RBP17.23■□□□□ 0.35
ITSN2-210ENST00000469848 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 MRC1P22897 1456 aa17.23■□□□□ 0.35
ITSN2-210ENST00000469848 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
ITSN2-210ENST00000469848 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
ITSN2-210ENST00000469848 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
ITSN2-210ENST00000469848 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
ITSN2-210ENST00000469848 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
ITSN2-210ENST00000469848 NFATC2IPQ8NCF5 419 aa17.21■□□□□ 0.35
ITSN2-210ENST00000469848 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms