RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 TCP11L2Q8N4U5 519 aa20.76■□□□□ 0.91
C19orf54-202ENST00000469741 USHBP1Q8N6Y0 703 aa20.75■□□□□ 0.91
C19orf54-202ENST00000469741 NLRP2Q9NX02 1062 aa20.74■□□□□ 0.91
C19orf54-202ENST00000469741 THSD7AQ9UPZ6 1657 aa20.74■□□□□ 0.91
C19orf54-202ENST00000469741 NBPF6Q5VWK0 638 aa20.74■□□□□ 0.91
C19orf54-202ENST00000469741 RUNDC1Q96C34 613 aa20.74■□□□□ 0.91
C19orf54-202ENST00000469741 NBPF4Q96M43 638 aa20.74■□□□□ 0.91
C19orf54-202ENST00000469741 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
C19orf54-202ENST00000469741 SRCAPQ6ZRS2 3230 aa20.73■□□□□ 0.91
C19orf54-202ENST00000469741 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
C19orf54-202ENST00000469741 CARD10Q9BWT7 1032 aa20.72■□□□□ 0.91
C19orf54-202ENST00000469741 E9PSI1 815 aa20.71■□□□□ 0.91
C19orf54-202ENST00000469741 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
C19orf54-202ENST00000469741 UPF1Q92900 1129 aaKnown RBP eCLIP20.7■□□□□ 0.91e-7■■■■□ 26
C19orf54-202ENST00000469741 ABCC6O95255 1503 aa20.69■□□□□ 0.9
C19orf54-202ENST00000469741 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
C19orf54-202ENST00000469741 FLT4P35916 1363 aa20.67■□□□□ 0.9
C19orf54-202ENST00000469741 EXOC6Q8TAG9 804 aa20.67■□□□□ 0.9
C19orf54-202ENST00000469741 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
C19orf54-202ENST00000469741 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
C19orf54-202ENST00000469741 FAM208AQ9UK61 1670 aaKnown RBP20.67■□□□□ 0.9
C19orf54-202ENST00000469741 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
C19orf54-202ENST00000469741 WNK3Q9BYP7 1800 aa20.67■□□□□ 0.9
C19orf54-202ENST00000469741 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
C19orf54-202ENST00000469741 CCDC27Q2M243 656 aa20.66■□□□□ 0.9
C19orf54-202ENST00000469741 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
C19orf54-202ENST00000469741 PTF1AQ7RTS3 328 aa20.65■□□□□ 0.9
C19orf54-202ENST00000469741 THRAP3Q9Y2W1 955 aaKnown RBP20.65■□□□□ 0.9
C19orf54-202ENST00000469741 LRRC37A3O60309 1634 aa20.64■□□□□ 0.9
C19orf54-202ENST00000469741 EYA1Q99502 592 aa20.64■□□□□ 0.9
C19orf54-202ENST00000469741 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.9
C19orf54-202ENST00000469741 MARCH10Q8NA82 808 aaPredicted RBP20.64■□□□□ 0.89
C19orf54-202ENST00000469741 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
C19orf54-202ENST00000469741 PARP4Q9UKK3 1724 aaKnown RBP20.63■□□□□ 0.89
C19orf54-202ENST00000469741 MEGF6O75095 1541 aa20.62■□□□□ 0.89
C19orf54-202ENST00000469741 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
C19orf54-202ENST00000469741 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.62■□□□□ 0.89
C19orf54-202ENST00000469741 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
C19orf54-202ENST00000469741 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
C19orf54-202ENST00000469741 PLIN1O60240 522 aa20.61■□□□□ 0.89
C19orf54-202ENST00000469741 DDB1Q16531 1140 aa20.6■□□□□ 0.89
C19orf54-202ENST00000469741 IL2RBP14784 551 aa20.59■□□□□ 0.89
C19orf54-202ENST00000469741 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
C19orf54-202ENST00000469741 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
C19orf54-202ENST00000469741 IL13P35225 146 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
C19orf54-202ENST00000469741 TRIM37O94972 964 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 DEFB132Q7Z7B7 95 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
C19orf54-202ENST00000469741 EXOC5O00471 708 aa20.56■□□□□ 0.88
C19orf54-202ENST00000469741 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
C19orf54-202ENST00000469741 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
C19orf54-202ENST00000469741 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
C19orf54-202ENST00000469741 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
C19orf54-202ENST00000469741 KCNQ2O43526 872 aa20.54■□□□□ 0.88
C19orf54-202ENST00000469741 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
C19orf54-202ENST00000469741 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
C19orf54-202ENST00000469741 C20orf194Q5TEA3 1177 aa20.52■□□□□ 0.88
C19orf54-202ENST00000469741 NCAPD2Q15021 1401 aa20.52■□□□□ 0.88
C19orf54-202ENST00000469741 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
C19orf54-202ENST00000469741 SBF2Q86WG5 1849 aa20.52■□□□□ 0.88
C19orf54-202ENST00000469741 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
C19orf54-202ENST00000469741 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
C19orf54-202ENST00000469741 HMOX1P09601 288 aa20.51■□□□□ 0.87
C19orf54-202ENST00000469741 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
C19orf54-202ENST00000469741 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
C19orf54-202ENST00000469741 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
C19orf54-202ENST00000469741 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
C19orf54-202ENST00000469741 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
C19orf54-202ENST00000469741 MAPK8IP3Q9UPT6 1336 aa20.49■□□□□ 0.87
C19orf54-202ENST00000469741 FCHSD2O94868 740 aa20.49■□□□□ 0.87
C19orf54-202ENST00000469741 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
C19orf54-202ENST00000469741 FAM196AQ6ZSG2 479 aa20.49■□□□□ 0.87
C19orf54-202ENST00000469741 CYP27B1O15528 508 aa20.49■□□□□ 0.87
C19orf54-202ENST00000469741 SULT6B1Q6IMI4 303 aa20.49■□□□□ 0.87
C19orf54-202ENST00000469741 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
C19orf54-202ENST00000469741 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
C19orf54-202ENST00000469741 BCAR3O75815 825 aa20.47■□□□□ 0.87
C19orf54-202ENST00000469741 EN1Q05925 392 aaPredicted RBP20.47■□□□□ 0.87
C19orf54-202ENST00000469741 IL16Q14005 1332 aa20.47■□□□□ 0.87
C19orf54-202ENST00000469741 TATP17735 454 aaPredicted RBP20.46■□□□□ 0.87
C19orf54-202ENST00000469741 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
C19orf54-202ENST00000469741 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
C19orf54-202ENST00000469741 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
C19orf54-202ENST00000469741 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
C19orf54-202ENST00000469741 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
C19orf54-202ENST00000469741 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
C19orf54-202ENST00000469741 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
C19orf54-202ENST00000469741 APBA3O96018 575 aa20.42■□□□□ 0.86
C19orf54-202ENST00000469741 PKD1L3Q7Z443 1732 aa20.42■□□□□ 0.86
C19orf54-202ENST00000469741 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
C19orf54-202ENST00000469741 PRIM1P49642 420 aaKnown RBP20.41■□□□□ 0.86
C19orf54-202ENST00000469741 KDRP35968 1356 aa20.4■□□□□ 0.86
C19orf54-202ENST00000469741 NEFMP07197 916 aa20.4■□□□□ 0.86
C19orf54-202ENST00000469741 RIPK4P57078 832 aa20.4■□□□□ 0.86
C19orf54-202ENST00000469741 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
C19orf54-202ENST00000469741 PROM2Q8N271 834 aa20.39■□□□□ 0.86
C19orf54-202ENST00000469741 TOGARAM1Q9Y4F4 1720 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms