RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
PMPCB-207ENST00000469560 AEBP1Q8IUX7 1158 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
PMPCB-207ENST00000469560 COL22A1Q8NFW1 1626 aaPredicted RBP9.44□□□□□ -0.9
PMPCB-207ENST00000469560 TOM1O60784 492 aa9.44□□□□□ -0.9
PMPCB-207ENST00000469560 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
PMPCB-207ENST00000469560 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
PMPCB-207ENST00000469560 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
PMPCB-207ENST00000469560 CHRNA2Q15822 529 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 IP6K1Q92551 441 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 CAMTA1Q9Y6Y1 1673 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 ARHGEF10O15013 1369 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 FLT4P35916 1363 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 KIAA0232Q92628 1395 aa9.43□□□□□ -0.9
PMPCB-207ENST00000469560 PHACTR3Q96KR7 559 aa9.42□□□□□ -0.9
PMPCB-207ENST00000469560 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
PMPCB-207ENST00000469560 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
PMPCB-207ENST00000469560 HMOX1P09601 288 aa9.42□□□□□ -0.9
PMPCB-207ENST00000469560 HNRNPUQ00839 825 aaKnown RBP eCLIP9.42□□□□□ -0.9
PMPCB-207ENST00000469560 LRRC59Q96AG4 307 aaKnown RBP9.42□□□□□ -0.9
PMPCB-207ENST00000469560 EYA1Q99502 592 aa9.42□□□□□ -0.9
PMPCB-207ENST00000469560 CPDO75976 1380 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 AMPHP49418 695 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
PMPCB-207ENST00000469560 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 IGSF1Q8N6C5 1336 aa9.41□□□□□ -0.9
PMPCB-207ENST00000469560 FAM208AQ9UK61 1670 aaKnown RBP9.4□□□□□ -0.9
PMPCB-207ENST00000469560 NCAPD2Q15021 1401 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 RTL1A6NKG5 1358 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 KIF24Q5T7B8 1368 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 ZNF521Q96K83 1311 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 APAF1O14727 1248 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.9
PMPCB-207ENST00000469560 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.9
PMPCB-207ENST00000469560 HSPA1LP34931 641 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 NUBP1P53384 320 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.9
PMPCB-207ENST00000469560 USHBP1Q8N6Y0 703 aa9.4□□□□□ -0.9
PMPCB-207ENST00000469560 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
PMPCB-207ENST00000469560 LRP6O75581 1613 aa9.39□□□□□ -0.91
PMPCB-207ENST00000469560 KDRP35968 1356 aa9.39□□□□□ -0.91
PMPCB-207ENST00000469560 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
PMPCB-207ENST00000469560 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
PMPCB-207ENST00000469560 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
PMPCB-207ENST00000469560 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
PMPCB-207ENST00000469560 RRP7AQ9Y3A4 280 aaKnown RBP9.39□□□□□ -0.91
PMPCB-207ENST00000469560 SALL2Q9Y467 1007 aaPredicted RBP9.39□□□□□ -0.91
PMPCB-207ENST00000469560 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
PMPCB-207ENST00000469560 ERBB3P21860 1342 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 TCP11L2Q8N4U5 519 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 ANKRD24Q8TF21 1146 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
PMPCB-207ENST00000469560 RUNDC1Q96C34 613 aa9.37□□□□□ -0.91
PMPCB-207ENST00000469560 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
PMPCB-207ENST00000469560 ZBED9Q6R2W3 1325 aa9.36□□□□□ -0.91
PMPCB-207ENST00000469560 FCHSD2O94868 740 aa9.36□□□□□ -0.91
PMPCB-207ENST00000469560 ABCC6O95255 1503 aa9.35□□□□□ -0.91
PMPCB-207ENST00000469560 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
PMPCB-207ENST00000469560 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
PMPCB-207ENST00000469560 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
PMPCB-207ENST00000469560 NRAPQ86VF7 1730 aa9.35□□□□□ -0.91
PMPCB-207ENST00000469560 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 PRDM11Q9NQV5 511 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 NUDCQ9Y266 331 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 MEGF6O75095 1541 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 COL14A1Q05707 1796 aaKnown RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 ADAMTS2O95450 1211 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
PMPCB-207ENST00000469560 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
PMPCB-207ENST00000469560 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
PMPCB-207ENST00000469560 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
PMPCB-207ENST00000469560 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
PMPCB-207ENST00000469560 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
PMPCB-207ENST00000469560 TRPC6Q9Y210 931 aa9.33□□□□□ -0.92
PMPCB-207ENST00000469560 SLIT2O94813 1529 aa9.33□□□□□ -0.92
PMPCB-207ENST00000469560 JCADQ9P266 1359 aa9.33□□□□□ -0.92
PMPCB-207ENST00000469560 MAP3K13O43283 966 aa9.32□□□□□ -0.92
PMPCB-207ENST00000469560 DCTN1Q14203 1278 aa9.32□□□□□ -0.92
PMPCB-207ENST00000469560 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
PMPCB-207ENST00000469560 BCL9LQ86UU0 1499 aa9.32□□□□□ -0.92
PMPCB-207ENST00000469560 WDR17Q8IZU2 1322 aa9.32□□□□□ -0.92
PMPCB-207ENST00000469560 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
PMPCB-207ENST00000469560 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
PMPCB-207ENST00000469560 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
PMPCB-207ENST00000469560 RIPK4P57078 832 aa9.3□□□□□ -0.92
PMPCB-207ENST00000469560 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms