RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 CABP2Q9NPB3 220 aa16.77■□□□□ 0.28
ARHGEF39-202ENST00000468876 IL2RBP14784 551 aa16.76■□□□□ 0.27
ARHGEF39-202ENST00000468876 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
ARHGEF39-202ENST00000468876 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
ARHGEF39-202ENST00000468876 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
ARHGEF39-202ENST00000468876 SRPK2P78362 688 aaKnown RBP16.75■□□□□ 0.27
ARHGEF39-202ENST00000468876 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
ARHGEF39-202ENST00000468876 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
ARHGEF39-202ENST00000468876 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
ARHGEF39-202ENST00000468876 SMC1BQ8NDV3 1235 aa16.74■□□□□ 0.27
ARHGEF39-202ENST00000468876 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
ARHGEF39-202ENST00000468876 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
ARHGEF39-202ENST00000468876 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
ARHGEF39-202ENST00000468876 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
ARHGEF39-202ENST00000468876 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
ARHGEF39-202ENST00000468876 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
ARHGEF39-202ENST00000468876 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF39-202ENST00000468876 PCNTO95613 3336 aa16.71■□□□□ 0.27
ARHGEF39-202ENST00000468876 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
ARHGEF39-202ENST00000468876 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
ARHGEF39-202ENST00000468876 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
ARHGEF39-202ENST00000468876 MLLT1Q03111 559 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF39-202ENST00000468876 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
ARHGEF39-202ENST00000468876 PLEKHG2Q9H7P9 1386 aa16.67■□□□□ 0.26
ARHGEF39-202ENST00000468876 KCPQ6ZWJ8 1503 aa16.67■□□□□ 0.26
ARHGEF39-202ENST00000468876 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
ARHGEF39-202ENST00000468876 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
ARHGEF39-202ENST00000468876 FOXN1O15353 648 aa16.65■□□□□ 0.26
ARHGEF39-202ENST00000468876 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
ARHGEF39-202ENST00000468876 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
ARHGEF39-202ENST00000468876 USP47Q96K76 1375 aa16.64■□□□□ 0.26
ARHGEF39-202ENST00000468876 PHF14O94880 888 aa16.64■□□□□ 0.25
ARHGEF39-202ENST00000468876 LY75O60449 1722 aa16.63■□□□□ 0.25
ARHGEF39-202ENST00000468876 FCHSD2O94868 740 aa16.63■□□□□ 0.25
ARHGEF39-202ENST00000468876 ERBB3P21860 1342 aa16.63■□□□□ 0.25
ARHGEF39-202ENST00000468876 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 NFAT5O94916 1531 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 AIDAQ96BJ3 306 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 ABHD8Q96I13 439 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 AK7Q96M32 723 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
ARHGEF39-202ENST00000468876 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
ARHGEF39-202ENST00000468876 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
ARHGEF39-202ENST00000468876 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
ARHGEF39-202ENST00000468876 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
ARHGEF39-202ENST00000468876 NSD2O96028 1365 aa16.61■□□□□ 0.25
ARHGEF39-202ENST00000468876 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
ARHGEF39-202ENST00000468876 CTCFP49711 727 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF39-202ENST00000468876 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
ARHGEF39-202ENST00000468876 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
ARHGEF39-202ENST00000468876 CCDC85CA6NKD9 419 aa16.58■□□□□ 0.24
ARHGEF39-202ENST00000468876 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
ARHGEF39-202ENST00000468876 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
ARHGEF39-202ENST00000468876 USP54Q70EL1 1684 aa16.58■□□□□ 0.24
ARHGEF39-202ENST00000468876 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
ARHGEF39-202ENST00000468876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
ARHGEF39-202ENST00000468876 TGFB2P61812 414 aa16.57■□□□□ 0.24
ARHGEF39-202ENST00000468876 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
ARHGEF39-202ENST00000468876 C5P01031 1676 aa16.56■□□□□ 0.24
ARHGEF39-202ENST00000468876 AMIGO3Q86WK7 504 aa16.55■□□□□ 0.24
ARHGEF39-202ENST00000468876 TNRC6CQ9HCJ0 1690 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-202ENST00000468876 MMP10P09238 476 aa16.54■□□□□ 0.24
ARHGEF39-202ENST00000468876 DPEP1P16444 411 aa16.54■□□□□ 0.24
ARHGEF39-202ENST00000468876 LBX1P52954 281 aa16.54■□□□□ 0.24
ARHGEF39-202ENST00000468876 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF39-202ENST00000468876 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
ARHGEF39-202ENST00000468876 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
ARHGEF39-202ENST00000468876 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
ARHGEF39-202ENST00000468876 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
ARHGEF39-202ENST00000468876 N4BP2Q86UW6 1770 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF39-202ENST00000468876 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
ARHGEF39-202ENST00000468876 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF39-202ENST00000468876 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
ARHGEF39-202ENST00000468876 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF39-202ENST00000468876 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
ARHGEF39-202ENST00000468876 SSFA2P28290 1259 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 RGS19P49795 217 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 NME9Q86XW9 330 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 LTN1O94822 1766 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 USP31Q70CQ4 1352 aa16.5■□□□□ 0.23
ARHGEF39-202ENST00000468876 TESK2Q96S53 571 aa16.49■□□□□ 0.23
ARHGEF39-202ENST00000468876 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
ARHGEF39-202ENST00000468876 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
ARHGEF39-202ENST00000468876 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
ARHGEF39-202ENST00000468876 SLC12A5Q9H2X9 1139 aa16.48■□□□□ 0.23
ARHGEF39-202ENST00000468876 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
ARHGEF39-202ENST00000468876 KIAA1551Q9HCM1 1747 aa16.46■□□□□ 0.23
ARHGEF39-202ENST00000468876 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
ARHGEF39-202ENST00000468876 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
ARHGEF39-202ENST00000468876 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
ARHGEF39-202ENST00000468876 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
ARHGEF39-202ENST00000468876 GNPATO15228 680 aa16.45■□□□□ 0.22
ARHGEF39-202ENST00000468876 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
ARHGEF39-202ENST00000468876 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
ARHGEF39-202ENST00000468876 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms