RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MEGF6O75095 1541 aa19.82■□□□□ 0.76
COL27A1-203ENST00000468565 WASHC2AQ641Q2 1341 aa19.82■□□□□ 0.76
COL27A1-203ENST00000468565 PLSCR1O15162 318 aa19.81■□□□□ 0.76
COL27A1-203ENST00000468565 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
COL27A1-203ENST00000468565 BTAF1O14981 1849 aa19.8■□□□□ 0.76
COL27A1-203ENST00000468565 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
COL27A1-203ENST00000468565 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
COL27A1-203ENST00000468565 MSH5O43196 834 aa19.79■□□□□ 0.76
COL27A1-203ENST00000468565 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
COL27A1-203ENST00000468565 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-203ENST00000468565 PTF1AQ7RTS3 328 aa19.78■□□□□ 0.76
COL27A1-203ENST00000468565 DOT1LQ8TEK3 1739 aa19.78■□□□□ 0.76
COL27A1-203ENST00000468565 PKD1L3Q7Z443 1732 aa19.77■□□□□ 0.76
COL27A1-203ENST00000468565 USHBP1Q8N6Y0 703 aa19.77■□□□□ 0.76
COL27A1-203ENST00000468565 ZCRB1Q8TBF4 217 aaKnown RBP19.77■□□□□ 0.76
COL27A1-203ENST00000468565 RAPGEF4Q8WZA2 1011 aa19.76■□□□□ 0.75
COL27A1-203ENST00000468565 LRP5O75197 1615 aa19.76■□□□□ 0.75
COL27A1-203ENST00000468565 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-203ENST00000468565 TNNT2P45379 298 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-203ENST00000468565 DDX54Q8TDD1 881 aaKnown RBP19.75■□□□□ 0.75
COL27A1-203ENST00000468565 KCNQ2O43526 872 aa19.74■□□□□ 0.75
COL27A1-203ENST00000468565 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-203ENST00000468565 AMER1Q5JTC6 1135 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-203ENST00000468565 MORC1Q86VD1 984 aa19.74■□□□□ 0.75
COL27A1-203ENST00000468565 ACSBG1Q96GR2 724 aa19.74■□□□□ 0.75
COL27A1-203ENST00000468565 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
COL27A1-203ENST00000468565 R3HDM1Q15032 1099 aaKnown RBP19.73■□□□□ 0.75
COL27A1-203ENST00000468565 PER1O15534 1290 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-203ENST00000468565 EYA1Q99502 592 aa19.71■□□□□ 0.75
COL27A1-203ENST00000468565 EIF4A2Q14240 407 aaKnown RBP19.7■□□□□ 0.74
COL27A1-203ENST00000468565 PROM2Q8N271 834 aa19.7■□□□□ 0.74
COL27A1-203ENST00000468565 PCDH11XQ9BZA7 1347 aa19.7■□□□□ 0.74
COL27A1-203ENST00000468565 PCDH11YQ9BZA8 1340 aa19.7■□□□□ 0.74
COL27A1-203ENST00000468565 SRCAPQ6ZRS2 3230 aa19.69■□□□□ 0.74
COL27A1-203ENST00000468565 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
COL27A1-203ENST00000468565 PLEKHG2Q9H7P9 1386 aa19.69■□□□□ 0.74
COL27A1-203ENST00000468565 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
COL27A1-203ENST00000468565 LY75O60449 1722 aa19.68■□□□□ 0.74
COL27A1-203ENST00000468565 ITGB4P16144 1822 aa19.68■□□□□ 0.74
COL27A1-203ENST00000468565 TOGARAM1Q9Y4F4 1720 aa19.67■□□□□ 0.74
COL27A1-203ENST00000468565 PAPPAQ13219 1627 aa19.66■□□□□ 0.74
COL27A1-203ENST00000468565 IGSF1Q8N6C5 1336 aa19.66■□□□□ 0.74
COL27A1-203ENST00000468565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.747e-17■■□□□ 14.5
COL27A1-203ENST00000468565 CASZ1Q86V15 1759 aa19.65■□□□□ 0.74
COL27A1-203ENST00000468565 PRIM1P49642 420 aaKnown RBP19.64■□□□□ 0.74
COL27A1-203ENST00000468565 CYP27B1O15528 508 aa19.64■□□□□ 0.73
COL27A1-203ENST00000468565 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
COL27A1-203ENST00000468565 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
COL27A1-203ENST00000468565 SYTL4Q96C24 671 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-203ENST00000468565 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
COL27A1-203ENST00000468565 ZBTB22O15209 634 aa19.61■□□□□ 0.73
COL27A1-203ENST00000468565 QSER1Q2KHR3 1735 aa19.61■□□□□ 0.73
COL27A1-203ENST00000468565 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-203ENST00000468565 STK32BQ9NY57 414 aa19.61■□□□□ 0.73
COL27A1-203ENST00000468565 SLC27A3Q5K4L6 730 aa19.6■□□□□ 0.73
COL27A1-203ENST00000468565 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-203ENST00000468565 IL13P35225 146 aa19.59■□□□□ 0.73
COL27A1-203ENST00000468565 MTHFSP49914 203 aa19.59■□□□□ 0.73
COL27A1-203ENST00000468565 SLC15A2Q16348 729 aa19.59■□□□□ 0.73
COL27A1-203ENST00000468565 KDRP35968 1356 aa19.57■□□□□ 0.72
COL27A1-203ENST00000468565 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
COL27A1-203ENST00000468565 LRRC4BQ9NT99 713 aa19.57■□□□□ 0.72
COL27A1-203ENST00000468565 PHKG2P15735 406 aa19.57■□□□□ 0.72
COL27A1-203ENST00000468565 TAF1LQ8IZX4 1826 aa19.56■□□□□ 0.72
COL27A1-203ENST00000468565 TUBGCP6Q96RT7 1819 aa19.56■□□□□ 0.72
COL27A1-203ENST00000468565 C5P01031 1676 aa19.55■□□□□ 0.72
COL27A1-203ENST00000468565 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-203ENST00000468565 AMOTQ4VCS5 1084 aa19.54■□□□□ 0.72
COL27A1-203ENST00000468565 MPRIPQ6WCQ1 1025 aa19.54■□□□□ 0.72
COL27A1-203ENST00000468565 AEBP1Q8IUX7 1158 aa19.54■□□□□ 0.72
COL27A1-203ENST00000468565 COL3A1P02461 1466 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-203ENST00000468565 SULT6B1Q6IMI4 303 aa19.53■□□□□ 0.72
COL27A1-203ENST00000468565 MIER1Q8N108 512 aa19.53■□□□□ 0.72
COL27A1-203ENST00000468565 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
COL27A1-203ENST00000468565 VIRMAQ69YN4 1812 aaKnown RBP19.52■□□□□ 0.72
COL27A1-203ENST00000468565 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
COL27A1-203ENST00000468565 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
COL27A1-203ENST00000468565 AKT1S1Q96B36 256 aa19.51■□□□□ 0.71
COL27A1-203ENST00000468565 CCNL1Q9UK58 526 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-203ENST00000468565 PALLDQ8WX93 1383 aa19.51■□□□□ 0.71
COL27A1-203ENST00000468565 SCN11AQ9UI33 1791 aa19.51■□□□□ 0.71
COL27A1-203ENST00000468565 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
COL27A1-203ENST00000468565 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-203ENST00000468565 HMGB2P26583 209 aaKnown RBP19.5■□□□□ 0.71
COL27A1-203ENST00000468565 PIGBQ92521 554 aa19.5■□□□□ 0.71
COL27A1-203ENST00000468565 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-203ENST00000468565 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-203ENST00000468565 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
COL27A1-203ENST00000468565 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-203ENST00000468565 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
COL27A1-203ENST00000468565 KCNQ4P56696 695 aa19.48■□□□□ 0.71
COL27A1-203ENST00000468565 KDM6AO15550 1401 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-203ENST00000468565 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
COL27A1-203ENST00000468565 COL24A1Q17RW2 1714 aa19.47■□□□□ 0.71
COL27A1-203ENST00000468565 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
COL27A1-203ENST00000468565 C1orf141Q5JVX7 400 aa19.46■□□□□ 0.71
COL27A1-203ENST00000468565 MTFR1LQ9H019 292 aa19.46■□□□□ 0.71
COL27A1-203ENST00000468565 C4BP0C0L5 1744 aa19.45■□□□□ 0.7
COL27A1-203ENST00000468565 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
COL27A1-203ENST00000468565 HMOX1P09601 288 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms