RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
NXF3-204ENST00000468528 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
NXF3-204ENST00000468528 NRAPQ86VF7 1730 aa9.43□□□□□ -0.9
NXF3-204ENST00000468528 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
NXF3-204ENST00000468528 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
NXF3-204ENST00000468528 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
NXF3-204ENST00000468528 CCDC9Q9Y3X0 531 aaKnown RBP9.43□□□□□ -0.9
NXF3-204ENST00000468528 OVOS2A0A0G2JMS6 1433 aa9.42□□□□□ -0.9
NXF3-204ENST00000468528 ATRNO75882 1429 aa9.42□□□□□ -0.9
NXF3-204ENST00000468528 APAF1O14727 1248 aa9.42□□□□□ -0.9
NXF3-204ENST00000468528 HSP90AB1P08238 724 aaKnown RBP9.42□□□□□ -0.9
NXF3-204ENST00000468528 CALD1Q05682 793 aaKnown RBP9.42□□□□□ -0.9
NXF3-204ENST00000468528 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
NXF3-204ENST00000468528 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
NXF3-204ENST00000468528 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
NXF3-204ENST00000468528 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 ONECUT3O60422 494 aaPredicted RBP9.41□□□□□ -0.9
NXF3-204ENST00000468528 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
NXF3-204ENST00000468528 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
NXF3-204ENST00000468528 C1orf141Q5JVX7 400 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
NXF3-204ENST00000468528 PHACTR3Q96KR7 559 aa9.41□□□□□ -0.9
NXF3-204ENST00000468528 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
NXF3-204ENST00000468528 DISP2A7MBM2 1401 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 GNAT3A8MTJ3 354 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 EXOC5O00471 708 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 RIPK4P57078 832 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 RBM6P78332 1123 aaKnown RBP9.4□□□□□ -0.9
NXF3-204ENST00000468528 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
NXF3-204ENST00000468528 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
NXF3-204ENST00000468528 USP35Q9P2H5 1018 aa9.4□□□□□ -0.9
NXF3-204ENST00000468528 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
NXF3-204ENST00000468528 DDB1Q16531 1140 aa9.39□□□□□ -0.91
NXF3-204ENST00000468528 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
NXF3-204ENST00000468528 MEGF6O75095 1541 aa9.39□□□□□ -0.91
NXF3-204ENST00000468528 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
NXF3-204ENST00000468528 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
NXF3-204ENST00000468528 FKBP8Q14318 412 aa9.38□□□□□ -0.91
NXF3-204ENST00000468528 ZNF530Q6P9A1 599 aaPredicted RBP9.38□□□□□ -0.91
NXF3-204ENST00000468528 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
NXF3-204ENST00000468528 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
NXF3-204ENST00000468528 TNS2Q63HR2 1409 aa9.38□□□□□ -0.91
NXF3-204ENST00000468528 IL16Q14005 1332 aa9.37□□□□□ -0.91
NXF3-204ENST00000468528 PHKG2P15735 406 aa9.37□□□□□ -0.91
NXF3-204ENST00000468528 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
NXF3-204ENST00000468528 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
NXF3-204ENST00000468528 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
NXF3-204ENST00000468528 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
NXF3-204ENST00000468528 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
NXF3-204ENST00000468528 PKD1L3Q7Z443 1732 aa9.36□□□□□ -0.91
NXF3-204ENST00000468528 RXRBP28702 533 aa9.36□□□□□ -0.91
NXF3-204ENST00000468528 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
NXF3-204ENST00000468528 ZNF521Q96K83 1311 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 ERVV-2B6SEH9 535 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 CYP27B1O15528 508 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 MYH16Q9H6N6 1097 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 RRP7AQ9Y3A4 280 aaKnown RBP9.35□□□□□ -0.91
NXF3-204ENST00000468528 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
NXF3-204ENST00000468528 GLI3P10071 1580 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 BCL9O00512 1426 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 A0A0G2JS52 829 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 E9PSI1 815 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 GNAI1P63096 354 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 MYT1Q01538 1121 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 TEFQ10587 303 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
NXF3-204ENST00000468528 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
NXF3-204ENST00000468528 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
NXF3-204ENST00000468528 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
NXF3-204ENST00000468528 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
NXF3-204ENST00000468528 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
NXF3-204ENST00000468528 CHMP4AQ9BY43 222 aa9.33□□□□□ -0.92
NXF3-204ENST00000468528 WNK3Q9BYP7 1800 aa9.33□□□□□ -0.92
NXF3-204ENST00000468528 CABP4P57796 275 aa9.32□□□□□ -0.92
NXF3-204ENST00000468528 TAF7Q15545 349 aaPredicted RBP9.32□□□□□ -0.92
NXF3-204ENST00000468528 MPRIPQ6WCQ1 1025 aa9.32□□□□□ -0.92
NXF3-204ENST00000468528 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
NXF3-204ENST00000468528 RGS17Q9UGC6 210 aaPredicted RBP9.32□□□□□ -0.92
NXF3-204ENST00000468528 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
NXF3-204ENST00000468528 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 CHL1O00533 1208 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
NXF3-204ENST00000468528 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
NXF3-204ENST00000468528 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 MCM10Q7L590 875 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 MARCH10Q8NA82 808 aaPredicted RBP9.31□□□□□ -0.92
NXF3-204ENST00000468528 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 ADAMTS7Q9UKP4 1686 aa9.31□□□□□ -0.92
NXF3-204ENST00000468528 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
NXF3-204ENST00000468528 MRC1P22897 1456 aa9.3□□□□□ -0.92
NXF3-204ENST00000468528 ZNF853P0CG23 659 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms