RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
CDK11A-212ENST00000468397 SHANK3Q9BYB0 1731 aa22.29■■□□□ 1.16
CDK11A-212ENST00000468397 PLEKHG2Q9H7P9 1386 aa22.29■■□□□ 1.16
CDK11A-212ENST00000468397 BCL9O00512 1426 aa22.29■■□□□ 1.16
CDK11A-212ENST00000468397 PKD1L3Q7Z443 1732 aa22.28■■□□□ 1.16
CDK11A-212ENST00000468397 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
CDK11A-212ENST00000468397 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
CDK11A-212ENST00000468397 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
CDK11A-212ENST00000468397 PCDH11XQ9BZA7 1347 aa22.26■■□□□ 1.15
CDK11A-212ENST00000468397 PCDH11YQ9BZA8 1340 aa22.26■■□□□ 1.15
CDK11A-212ENST00000468397 TRIM37O94972 964 aa22.25■■□□□ 1.15
CDK11A-212ENST00000468397 KDRP35968 1356 aa22.25■■□□□ 1.15
CDK11A-212ENST00000468397 SULT6B1Q6IMI4 303 aa22.24■■□□□ 1.15
CDK11A-212ENST00000468397 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
CDK11A-212ENST00000468397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDK11A-212ENST00000468397 KAT6BQ8WYB5 2073 aa22.22■■□□□ 1.15
CDK11A-212ENST00000468397 BAG6P46379 1132 aa22.22■■□□□ 1.15
CDK11A-212ENST00000468397 AEBP1Q8IUX7 1158 aa22.22■■□□□ 1.15
CDK11A-212ENST00000468397 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
CDK11A-212ENST00000468397 NHSQ6T4R5 1651 aa22.21■■□□□ 1.15
CDK11A-212ENST00000468397 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
CDK11A-212ENST00000468397 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
CDK11A-212ENST00000468397 DOT1LQ8TEK3 1739 aa22.19■■□□□ 1.14
CDK11A-212ENST00000468397 HMOX1P09601 288 aa22.18■■□□□ 1.14
CDK11A-212ENST00000468397 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
CDK11A-212ENST00000468397 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
CDK11A-212ENST00000468397 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
CDK11A-212ENST00000468397 PRKRIP1Q9H875 184 aaPredicted RBP22.18■■□□□ 1.14
CDK11A-212ENST00000468397 ACSBG1Q96GR2 724 aa22.17■■□□□ 1.14
CDK11A-212ENST00000468397 CYP27B1O15528 508 aa22.16■■□□□ 1.14
CDK11A-212ENST00000468397 APBA3O96018 575 aa22.16■■□□□ 1.14
CDK11A-212ENST00000468397 DEFB132Q7Z7B7 95 aa22.16■■□□□ 1.14
CDK11A-212ENST00000468397 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
CDK11A-212ENST00000468397 RGPD3A6NKT7 1758 aaPredicted RBP22.14■■□□□ 1.13
CDK11A-212ENST00000468397 RGPD4Q7Z3J3 1758 aa22.14■■□□□ 1.13
CDK11A-212ENST00000468397 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
CDK11A-212ENST00000468397 PHKG2P15735 406 aa22.13■■□□□ 1.13
CDK11A-212ENST00000468397 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.13
CDK11A-212ENST00000468397 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
CDK11A-212ENST00000468397 BTAF1O14981 1849 aa22.13■■□□□ 1.13
CDK11A-212ENST00000468397 KCNQ2O43526 872 aa22.12■■□□□ 1.13
CDK11A-212ENST00000468397 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
CDK11A-212ENST00000468397 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
CDK11A-212ENST00000468397 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
CDK11A-212ENST00000468397 NKX1-1Q15270 411 aaPredicted RBP22.11■■□□□ 1.13
CDK11A-212ENST00000468397 C1orf141Q5JVX7 400 aa22.11■■□□□ 1.13
CDK11A-212ENST00000468397 TOGARAM1Q9Y4F4 1720 aa22.11■■□□□ 1.13
CDK11A-212ENST00000468397 PRIM1P49642 420 aaKnown RBP22.1■■□□□ 1.13
CDK11A-212ENST00000468397 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
CDK11A-212ENST00000468397 ANP32CO43423 234 aa22.09■■□□□ 1.13
CDK11A-212ENST00000468397 PLSCR1O15162 318 aa22.08■■□□□ 1.13
CDK11A-212ENST00000468397 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
CDK11A-212ENST00000468397 ITGB4P16144 1822 aa22.08■■□□□ 1.12
CDK11A-212ENST00000468397 RREB1Q92766 1687 aa22.07■■□□□ 1.12
CDK11A-212ENST00000468397 FCHSD2O94868 740 aa22.07■■□□□ 1.12
CDK11A-212ENST00000468397 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
CDK11A-212ENST00000468397 EZH2Q15910 746 aaKnown RBP22.07■■□□□ 1.12
CDK11A-212ENST00000468397 CAMKK2Q96RR4 588 aa22.07■■□□□ 1.12
CDK11A-212ENST00000468397 DCAF5Q96JK2 942 aa22.06■■□□□ 1.12
CDK11A-212ENST00000468397 AKAP4Q5JQC9 854 aa22.05■■□□□ 1.12
CDK11A-212ENST00000468397 MTHFSDQ2M296 383 aaKnown RBP22.04■■□□□ 1.12
CDK11A-212ENST00000468397 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
CDK11A-212ENST00000468397 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
CDK11A-212ENST00000468397 NEFMP07197 916 aa22.03■■□□□ 1.12
CDK11A-212ENST00000468397 MPRIPQ6WCQ1 1025 aa22.03■■□□□ 1.12
CDK11A-212ENST00000468397 PNNQ9H307 717 aaKnown RBP22.03■■□□□ 1.12
CDK11A-212ENST00000468397 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
CDK11A-212ENST00000468397 NUP188Q5SRE5 1749 aa22.03■■□□□ 1.12
CDK11A-212ENST00000468397 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
CDK11A-212ENST00000468397 VIRMAQ69YN4 1812 aaKnown RBP22.01■■□□□ 1.11
CDK11A-212ENST00000468397 ERVV-2B6SEH9 535 aa22.01■■□□□ 1.11
CDK11A-212ENST00000468397 WDR43Q15061 677 aaKnown RBP eCLIP22.01■■□□□ 1.11
CDK11A-212ENST00000468397 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
CDK11A-212ENST00000468397 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
CDK11A-212ENST00000468397 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
CDK11A-212ENST00000468397 LY75O60449 1722 aa21.99■■□□□ 1.11
CDK11A-212ENST00000468397 CABP4P57796 275 aa21.98■■□□□ 1.11
CDK11A-212ENST00000468397 MAPK8IP3Q9UPT6 1336 aa21.98■■□□□ 1.11
CDK11A-212ENST00000468397 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
CDK11A-212ENST00000468397 GNAT3A8MTJ3 354 aa21.97■■□□□ 1.11
CDK11A-212ENST00000468397 PIGBQ92521 554 aa21.97■■□□□ 1.11
CDK11A-212ENST00000468397 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
CDK11A-212ENST00000468397 PALLDQ8WX93 1383 aa21.96■■□□□ 1.11
CDK11A-212ENST00000468397 RNMTO43148 476 aaKnown RBP21.95■■□□□ 1.1
CDK11A-212ENST00000468397 NBPF14Q5TI25 921 aa21.95■■□□□ 1.1
CDK11A-212ENST00000468397 PROM2Q8N271 834 aa21.95■■□□□ 1.1
CDK11A-212ENST00000468397 MRC1P22897 1456 aa21.95■■□□□ 1.1
CDK11A-212ENST00000468397 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
CDK11A-212ENST00000468397 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
CDK11A-212ENST00000468397 LGR6Q9HBX8 967 aa21.93■■□□□ 1.1
CDK11A-212ENST00000468397 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
CDK11A-212ENST00000468397 DLG5Q8TDM6 1919 aa21.91■■□□□ 1.1
CDK11A-212ENST00000468397 NFATC2IPQ8NCF5 419 aa21.91■■□□□ 1.1
CDK11A-212ENST00000468397 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
CDK11A-212ENST00000468397 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
CDK11A-212ENST00000468397 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
CDK11A-212ENST00000468397 HMGB2P26583 209 aaKnown RBP21.9■■□□□ 1.1
CDK11A-212ENST00000468397 ASAP1Q9ULH1 1129 aa21.9■■□□□ 1.1
CDK11A-212ENST00000468397 ADAMTS8Q9UP79 889 aa21.9■■□□□ 1.1
CDK11A-212ENST00000468397 PAPPAQ13219 1627 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms