RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 RTL1A6NKG5 1358 aa15.4■□□□□ 0.06
COL4A6-205ENST00000468338 LRRC37A3O60309 1634 aa15.4■□□□□ 0.06
COL4A6-205ENST00000468338 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
COL4A6-205ENST00000468338 PANK3Q9H999 370 aa15.4■□□□□ 0.06
COL4A6-205ENST00000468338 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
COL4A6-205ENST00000468338 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
COL4A6-205ENST00000468338 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
COL4A6-205ENST00000468338 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
COL4A6-205ENST00000468338 PEAK1Q9H792 1746 aa15.39■□□□□ 0.05
COL4A6-205ENST00000468338 KIF7Q2M1P5 1343 aa15.39■□□□□ 0.05
COL4A6-205ENST00000468338 RGPD1P0DJD0 1748 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 BCL9O00512 1426 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 DDB1Q16531 1140 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 DEFB132Q7Z7B7 95 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 HS6ST3Q8IZP7 471 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 NLRP2Q9NX02 1062 aa15.38■□□□□ 0.05
COL4A6-205ENST00000468338 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
COL4A6-205ENST00000468338 AMPHP49418 695 aa15.37■□□□□ 0.05
COL4A6-205ENST00000468338 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
COL4A6-205ENST00000468338 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
COL4A6-205ENST00000468338 INSRP06213 1382 aa15.36■□□□□ 0.05
COL4A6-205ENST00000468338 ANKRD26Q9UPS8 1709 aa15.35■□□□□ 0.05
COL4A6-205ENST00000468338 MARCH10Q8NA82 808 aaPredicted RBP15.35■□□□□ 0.05
COL4A6-205ENST00000468338 FLT4P35916 1363 aa15.35■□□□□ 0.05
COL4A6-205ENST00000468338 OVOS2A0A0G2JMS6 1433 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 MAP2P11137 1827 aaKnown RBP15.34■□□□□ 0.05
COL4A6-205ENST00000468338 SBF2Q86WG5 1849 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 EXOC5O00471 708 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 TRIM37O94972 964 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 IL2RBP14784 551 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 BAG6P46379 1132 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 NSD2O96028 1365 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
COL4A6-205ENST00000468338 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
COL4A6-205ENST00000468338 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-205ENST00000468338 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-205ENST00000468338 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
COL4A6-205ENST00000468338 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
COL4A6-205ENST00000468338 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
COL4A6-205ENST00000468338 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
COL4A6-205ENST00000468338 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
COL4A6-205ENST00000468338 WASHC2AQ641Q2 1341 aa15.32■□□□□ 0.04
COL4A6-205ENST00000468338 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
COL4A6-205ENST00000468338 NBPF6Q5VWK0 638 aa15.31■□□□□ 0.04
COL4A6-205ENST00000468338 NBPF4Q96M43 638 aa15.31■□□□□ 0.04
COL4A6-205ENST00000468338 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
COL4A6-205ENST00000468338 NUBP1P53384 320 aa15.3■□□□□ 0.04
COL4A6-205ENST00000468338 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
COL4A6-205ENST00000468338 PARD3Q8TEW0 1356 aa15.29■□□□□ 0.04
COL4A6-205ENST00000468338 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
COL4A6-205ENST00000468338 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
COL4A6-205ENST00000468338 APBA3O96018 575 aa15.28■□□□□ 0.04
COL4A6-205ENST00000468338 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
COL4A6-205ENST00000468338 PLSCR1O15162 318 aa15.27■□□□□ 0.04
COL4A6-205ENST00000468338 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.04
COL4A6-205ENST00000468338 MEGF6O75095 1541 aa15.27■□□□□ 0.03
COL4A6-205ENST00000468338 PTF1AQ7RTS3 328 aa15.26■□□□□ 0.03
COL4A6-205ENST00000468338 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
COL4A6-205ENST00000468338 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
COL4A6-205ENST00000468338 RGPD3A6NKT7 1758 aaPredicted RBP15.25■□□□□ 0.03
COL4A6-205ENST00000468338 RGPD4Q7Z3J3 1758 aa15.25■□□□□ 0.03
COL4A6-205ENST00000468338 SHANK3Q9BYB0 1731 aa15.25■□□□□ 0.03
COL4A6-205ENST00000468338 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
COL4A6-205ENST00000468338 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-205ENST00000468338 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-205ENST00000468338 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
COL4A6-205ENST00000468338 RNF25Q96BH1 459 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-205ENST00000468338 RREB1Q92766 1687 aa15.24■□□□□ 0.03
COL4A6-205ENST00000468338 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
COL4A6-205ENST00000468338 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
COL4A6-205ENST00000468338 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
COL4A6-205ENST00000468338 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
COL4A6-205ENST00000468338 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
COL4A6-205ENST00000468338 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
COL4A6-205ENST00000468338 KCNQ2O43526 872 aa15.22■□□□□ 0.03
COL4A6-205ENST00000468338 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
COL4A6-205ENST00000468338 EIF4A2Q14240 407 aaKnown RBP15.22■□□□□ 0.03
COL4A6-205ENST00000468338 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
COL4A6-205ENST00000468338 EYA1Q99502 592 aa15.22■□□□□ 0.03
COL4A6-205ENST00000468338 NBR1Q14596 966 aa15.21■□□□□ 0.03
COL4A6-205ENST00000468338 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
COL4A6-205ENST00000468338 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
COL4A6-205ENST00000468338 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-205ENST00000468338 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
COL4A6-205ENST00000468338 PLEKHG2Q9H7P9 1386 aa15.2■□□□□ 0.02
COL4A6-205ENST00000468338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL4A6-205ENST00000468338 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
COL4A6-205ENST00000468338 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
COL4A6-205ENST00000468338 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
COL4A6-205ENST00000468338 BTAF1O14981 1849 aa15.17■□□□□ 0.02
COL4A6-205ENST00000468338 CYP27B1O15528 508 aa15.17■□□□□ 0.02
COL4A6-205ENST00000468338 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
COL4A6-205ENST00000468338 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
COL4A6-205ENST00000468338 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
COL4A6-205ENST00000468338 IL13P35225 146 aa15.15■□□□□ 0.02
COL4A6-205ENST00000468338 MTHFSP49914 203 aa15.15■□□□□ 0.02
COL4A6-205ENST00000468338 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-205ENST00000468338 TXNRD1Q16881 649 aa15.15■□□□□ 0.02
COL4A6-205ENST00000468338 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms