RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 NHSQ6T4R5 1651 aa23.5■■□□□ 1.35
SSBP1-207ENST00000468267 MEGF6O75095 1541 aa23.49■■□□□ 1.35
SSBP1-207ENST00000468267 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
SSBP1-207ENST00000468267 ZCRB1Q8TBF4 217 aaKnown RBP23.49■■□□□ 1.35
SSBP1-207ENST00000468267 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
SSBP1-207ENST00000468267 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
SSBP1-207ENST00000468267 NSD2O96028 1365 aa23.48■■□□□ 1.35
SSBP1-207ENST00000468267 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
SSBP1-207ENST00000468267 PROM2Q8N271 834 aa23.47■■□□□ 1.35
SSBP1-207ENST00000468267 RAPGEF4Q8WZA2 1011 aa23.47■■□□□ 1.35
SSBP1-207ENST00000468267 SHANK3Q9BYB0 1731 aa23.47■■□□□ 1.35
SSBP1-207ENST00000468267 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
SSBP1-207ENST00000468267 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
SSBP1-207ENST00000468267 BTAF1O14981 1849 aa23.44■■□□□ 1.34
SSBP1-207ENST00000468267 LRP5O75197 1615 aa23.43■■□□□ 1.34
SSBP1-207ENST00000468267 TXNRD1Q16881 649 aa23.42■■□□□ 1.34
SSBP1-207ENST00000468267 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
SSBP1-207ENST00000468267 MORC1Q86VD1 984 aa23.41■■□□□ 1.34
SSBP1-207ENST00000468267 EYA1Q99502 592 aa23.4■■□□□ 1.34
SSBP1-207ENST00000468267 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.33
SSBP1-207ENST00000468267 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
SSBP1-207ENST00000468267 EIF4A2Q14240 407 aaKnown RBP23.38■■□□□ 1.33
SSBP1-207ENST00000468267 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
SSBP1-207ENST00000468267 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
SSBP1-207ENST00000468267 PCDH11XQ9BZA7 1347 aa23.36■■□□□ 1.33
SSBP1-207ENST00000468267 PCDH11YQ9BZA8 1340 aa23.36■■□□□ 1.33
SSBP1-207ENST00000468267 PER1O15534 1290 aaPredicted RBP23.36■■□□□ 1.33
SSBP1-207ENST00000468267 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
SSBP1-207ENST00000468267 PKD1L3Q7Z443 1732 aa23.34■■□□□ 1.33
SSBP1-207ENST00000468267 CYP27B1O15528 508 aa23.33■■□□□ 1.33
SSBP1-207ENST00000468267 STK32BQ9NY57 414 aa23.32■■□□□ 1.32
SSBP1-207ENST00000468267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.32
SSBP1-207ENST00000468267 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
SSBP1-207ENST00000468267 SLC15A2Q16348 729 aa23.3■■□□□ 1.32
SSBP1-207ENST00000468267 LRRC4BQ9NT99 713 aa23.3■■□□□ 1.32
SSBP1-207ENST00000468267 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
SSBP1-207ENST00000468267 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
SSBP1-207ENST00000468267 SLC27A3Q5K4L6 730 aa23.28■■□□□ 1.32
SSBP1-207ENST00000468267 PAPPAQ13219 1627 aa23.27■■□□□ 1.32
SSBP1-207ENST00000468267 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
SSBP1-207ENST00000468267 LY75O60449 1722 aa23.27■■□□□ 1.32
SSBP1-207ENST00000468267 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
SSBP1-207ENST00000468267 PDGFDQ9GZP0 370 aaPredicted RBP23.26■■□□□ 1.31
SSBP1-207ENST00000468267 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
SSBP1-207ENST00000468267 ITGB4P16144 1822 aa23.26■■□□□ 1.31
SSBP1-207ENST00000468267 PLEKHG2Q9H7P9 1386 aa23.26■■□□□ 1.31
SSBP1-207ENST00000468267 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
SSBP1-207ENST00000468267 TOGARAM1Q9Y4F4 1720 aa23.24■■□□□ 1.31
SSBP1-207ENST00000468267 IL13P35225 146 aa23.23■■□□□ 1.31
SSBP1-207ENST00000468267 MTHFSP49914 203 aa23.23■■□□□ 1.31
SSBP1-207ENST00000468267 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
SSBP1-207ENST00000468267 PHKG2P15735 406 aa23.22■■□□□ 1.31
SSBP1-207ENST00000468267 ZNF827Q17R98 1081 aa23.22■■□□□ 1.31
SSBP1-207ENST00000468267 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
SSBP1-207ENST00000468267 KCNQ4P56696 695 aa23.21■■□□□ 1.31
SSBP1-207ENST00000468267 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
SSBP1-207ENST00000468267 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
SSBP1-207ENST00000468267 ZBTB7AO95365 584 aa23.19■■□□□ 1.3
SSBP1-207ENST00000468267 PLEKHO1Q53GL0 409 aaPredicted RBP23.19■■□□□ 1.3
SSBP1-207ENST00000468267 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
SSBP1-207ENST00000468267 SULT6B1Q6IMI4 303 aa23.18■■□□□ 1.3
SSBP1-207ENST00000468267 PIGBQ92521 554 aa23.18■■□□□ 1.3
SSBP1-207ENST00000468267 KDRP35968 1356 aa23.17■■□□□ 1.3
SSBP1-207ENST00000468267 AMOTQ4VCS5 1084 aa23.17■■□□□ 1.3
SSBP1-207ENST00000468267 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
SSBP1-207ENST00000468267 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
SSBP1-207ENST00000468267 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
SSBP1-207ENST00000468267 PALLDQ8WX93 1383 aa23.15■■□□□ 1.3
SSBP1-207ENST00000468267 PPP1R1BQ9UD71 204 aaPredicted RBP23.15■■□□□ 1.3
SSBP1-207ENST00000468267 ATF5Q9Y2D1 282 aaPredicted RBP23.15■■□□□ 1.3
SSBP1-207ENST00000468267 ZNF530Q6P9A1 599 aaPredicted RBP23.14■■□□□ 1.29
SSBP1-207ENST00000468267 MTFR1LQ9H019 292 aa23.14■■□□□ 1.29
SSBP1-207ENST00000468267 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
SSBP1-207ENST00000468267 TUBGCP6Q96RT7 1819 aa23.14■■□□□ 1.29
SSBP1-207ENST00000468267 DIAPH1O60610 1272 aaKnown RBP23.13■■□□□ 1.29
SSBP1-207ENST00000468267 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
SSBP1-207ENST00000468267 PTGER2P43116 358 aa23.13■■□□□ 1.29
SSBP1-207ENST00000468267 TFCP2L1Q9NZI6 479 aa23.13■■□□□ 1.29
SSBP1-207ENST00000468267 TAF1LQ8IZX4 1826 aa23.12■■□□□ 1.29
SSBP1-207ENST00000468267 ERVV-2B6SEH9 535 aa23.12■■□□□ 1.29
SSBP1-207ENST00000468267 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
SSBP1-207ENST00000468267 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
SSBP1-207ENST00000468267 PNPLA7Q6ZV29 1317 aa23.11■■□□□ 1.29
SSBP1-207ENST00000468267 C5P01031 1676 aa23.11■■□□□ 1.29
SSBP1-207ENST00000468267 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
SSBP1-207ENST00000468267 C1orf141Q5JVX7 400 aa23.09■■□□□ 1.29
SSBP1-207ENST00000468267 SLC16A10Q8TF71 515 aa23.09■■□□□ 1.29
SSBP1-207ENST00000468267 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
SSBP1-207ENST00000468267 HMOX1P09601 288 aa23.08■■□□□ 1.29
SSBP1-207ENST00000468267 COL3A1P02461 1466 aaPredicted RBP23.08■■□□□ 1.29
SSBP1-207ENST00000468267 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
SSBP1-207ENST00000468267 ATG3Q9NT62 314 aa23.07■■□□□ 1.28
SSBP1-207ENST00000468267 LOC102724428A0A0B4J2F2 783 aa23.06■■□□□ 1.28
SSBP1-207ENST00000468267 SIK1P57059 783 aa23.06■■□□□ 1.28
SSBP1-207ENST00000468267 CABP4P57796 275 aa23.04■■□□□ 1.28
SSBP1-207ENST00000468267 C4BP0C0L5 1744 aa23.03■■□□□ 1.28
SSBP1-207ENST00000468267 COL24A1Q17RW2 1714 aa23.03■■□□□ 1.28
SSBP1-207ENST00000468267 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
SSBP1-207ENST00000468267 COL23A1Q86Y22 540 aaPredicted RBP23.03■■□□□ 1.28
SSBP1-207ENST00000468267 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 223.1 ms