RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CT47B1P0C2W7 299 aaPredicted RBP26.62■■□□□ 1.85
TMEM53-207ENST00000468117 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 CSB-PGBD3P0DP91 1061 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 C20orf194Q5TEA3 1177 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 BCL2L13Q9BXK5 485 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 MAP3K5Q99683 1374 aa26.61■■□□□ 1.85
TMEM53-207ENST00000468117 TOM1O60784 492 aa26.6■■□□□ 1.85
TMEM53-207ENST00000468117 CRB1P82279 1406 aa26.6■■□□□ 1.85
TMEM53-207ENST00000468117 EXOC6Q8TAG9 804 aa26.6■■□□□ 1.85
TMEM53-207ENST00000468117 PIP4K2BP78356 416 aa26.59■■□□□ 1.85
TMEM53-207ENST00000468117 LRRC37A3O60309 1634 aa26.58■■□□□ 1.85
TMEM53-207ENST00000468117 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
TMEM53-207ENST00000468117 VIRMAQ69YN4 1812 aaKnown RBP26.56■■□□□ 1.84
TMEM53-207ENST00000468117 PLEKHO1Q53GL0 409 aaPredicted RBP26.56■■□□□ 1.84
TMEM53-207ENST00000468117 COL16A1Q07092 1604 aaPredicted RBP26.56■■□□□ 1.84
TMEM53-207ENST00000468117 COL22A1Q8NFW1 1626 aaPredicted RBP26.56■■□□□ 1.84
TMEM53-207ENST00000468117 CHL1O00533 1208 aa26.56■■□□□ 1.84
TMEM53-207ENST00000468117 IL17REQ8NFR9 667 aa26.55■■□□□ 1.84
TMEM53-207ENST00000468117 CRBNQ96SW2 442 aa26.55■■□□□ 1.84
TMEM53-207ENST00000468117 AMOTQ4VCS5 1084 aa26.55■■□□□ 1.84
TMEM53-207ENST00000468117 TSPYL6Q8N831 410 aa26.55■■□□□ 1.84
TMEM53-207ENST00000468117 FRAT1Q92837 279 aaPredicted RBP26.55■■□□□ 1.84
TMEM53-207ENST00000468117 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
TMEM53-207ENST00000468117 ZNF530Q6P9A1 599 aaPredicted RBP26.54■■□□□ 1.84
TMEM53-207ENST00000468117 COL5A2P05997 1499 aaPredicted RBP26.54■■□□□ 1.84
TMEM53-207ENST00000468117 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
TMEM53-207ENST00000468117 ELL2O00472 640 aaPredicted RBP26.53■■□□□ 1.84
TMEM53-207ENST00000468117 SSH1Q8WYL5 1049 aa26.53■■□□□ 1.84
TMEM53-207ENST00000468117 RAPGEF4Q8WZA2 1011 aa26.53■■□□□ 1.84
TMEM53-207ENST00000468117 MIS18AQ9NYP9 233 aa26.53■■□□□ 1.84
TMEM53-207ENST00000468117 UBAP1LF5GYI3 381 aa26.52■■□□□ 1.84
TMEM53-207ENST00000468117 C8orf58Q8NAV2 365 aa26.52■■□□□ 1.84
TMEM53-207ENST00000468117 SMC4Q9NTJ3 1288 aa26.52■■□□□ 1.84
TMEM53-207ENST00000468117 WDR17Q8IZU2 1322 aa26.51■■□□□ 1.83
TMEM53-207ENST00000468117 MEGF6O75095 1541 aa26.51■■□□□ 1.83
TMEM53-207ENST00000468117 VAMP4O75379 141 aa26.51■■□□□ 1.83
TMEM53-207ENST00000468117 AKAP4Q5JQC9 854 aa26.5■■□□□ 1.83
TMEM53-207ENST00000468117 TWISTNBQ3B726 338 aaPredicted RBP26.49■■□□□ 1.83
TMEM53-207ENST00000468117 TSPYL4Q9UJ04 414 aa26.49■■□□□ 1.83
TMEM53-207ENST00000468117 TATP17735 454 aaPredicted RBP26.48■■□□□ 1.83
TMEM53-207ENST00000468117 TOM1L2Q6ZVM7 507 aa26.48■■□□□ 1.83
TMEM53-207ENST00000468117 LGR6Q9HBX8 967 aa26.48■■□□□ 1.83
TMEM53-207ENST00000468117 CEMIPQ8WUJ3 1361 aa26.48■■□□□ 1.83
TMEM53-207ENST00000468117 KRT24Q2M2I5 525 aa26.48■■□□□ 1.83
TMEM53-207ENST00000468117 C1orf141Q5JVX7 400 aa26.48■■□□□ 1.83
TMEM53-207ENST00000468117 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
TMEM53-207ENST00000468117 ALDH1L2Q3SY69 923 aa26.46■■□□□ 1.83
TMEM53-207ENST00000468117 MPRIPQ6WCQ1 1025 aa26.46■■□□□ 1.83
TMEM53-207ENST00000468117 ZNF428Q96B54 188 aa26.46■■□□□ 1.83
TMEM53-207ENST00000468117 PDE3AQ14432 1141 aa26.46■■□□□ 1.83
TMEM53-207ENST00000468117 CCDC136Q96JN2 1154 aa26.46■■□□□ 1.83
TMEM53-207ENST00000468117 COL14A1Q05707 1796 aaKnown RBP26.45■■□□□ 1.83
TMEM53-207ENST00000468117 TNNQ9UQP3 1299 aa26.45■■□□□ 1.82
TMEM53-207ENST00000468117 EVA1CP58658 441 aa26.44■■□□□ 1.82
TMEM53-207ENST00000468117 PANK1Q8TE04 598 aa26.44■■□□□ 1.82
TMEM53-207ENST00000468117 TAF7Q15545 349 aaPredicted RBP26.44■■□□□ 1.82
TMEM53-207ENST00000468117 LARP1Q6PKG0 1096 aaKnown RBP26.44■■□□□ 1.82
TMEM53-207ENST00000468117 PKD1L3Q7Z443 1732 aa26.44■■□□□ 1.82
TMEM53-207ENST00000468117 BTG4Q9NY30 223 aa26.43■■□□□ 1.82
TMEM53-207ENST00000468117 PARP4Q9UKK3 1724 aaKnown RBP26.42■■□□□ 1.82
TMEM53-207ENST00000468117 ZKSCAN2Q63HK3 967 aa26.42■■□□□ 1.82
TMEM53-207ENST00000468117 SPG7Q9UQ90 795 aa26.42■■□□□ 1.82
TMEM53-207ENST00000468117 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
TMEM53-207ENST00000468117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.41■■□□□ 1.82
TMEM53-207ENST00000468117 NOB1Q9ULX3 412 aaKnown RBP26.41■■□□□ 1.82
TMEM53-207ENST00000468117 CLUAP1Q96AJ1 413 aa26.41■■□□□ 1.82
TMEM53-207ENST00000468117 RNMTO43148 476 aaKnown RBP26.4■■□□□ 1.82
TMEM53-207ENST00000468117 RLBP1P12271 317 aa26.4■■□□□ 1.82
TMEM53-207ENST00000468117 CARD10Q9BWT7 1032 aa26.4■■□□□ 1.82
TMEM53-207ENST00000468117 COG6Q9Y2V7 657 aa26.39■■□□□ 1.82
TMEM53-207ENST00000468117 ADAMTS7Q9UKP4 1686 aa26.39■■□□□ 1.82
TMEM53-207ENST00000468117 KIF16BQ96L93 1317 aa26.39■■□□□ 1.82
TMEM53-207ENST00000468117 SCN11AQ9UI33 1791 aa26.39■■□□□ 1.82
TMEM53-207ENST00000468117 PLEKHG2Q9H7P9 1386 aa26.39■■□□□ 1.82
TMEM53-207ENST00000468117 TEFQ10587 303 aa26.39■■□□□ 1.81
TMEM53-207ENST00000468117 OVOS2A0A0G2JMS6 1433 aa26.38■■□□□ 1.81
TMEM53-207ENST00000468117 CERKQ8TCT0 537 aa26.38■■□□□ 1.81
TMEM53-207ENST00000468117 BABAM1Q9NWV8 329 aa26.38■■□□□ 1.81
TMEM53-207ENST00000468117 KDM3BQ7LBC6 1761 aa26.38■■□□□ 1.81
TMEM53-207ENST00000468117 MRPL50Q8N5N7 158 aaKnown RBP26.38■■□□□ 1.81
TMEM53-207ENST00000468117 SIPA1L3O60292 1781 aaPredicted RBP26.37■■□□□ 1.81
TMEM53-207ENST00000468117 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
TMEM53-207ENST00000468117 TRIM27P14373 513 aa26.37■■□□□ 1.81
TMEM53-207ENST00000468117 PHKG2P15735 406 aa26.37■■□□□ 1.81
TMEM53-207ENST00000468117 BRPF1P55201 1214 aaPredicted RBP26.37■■□□□ 1.81
TMEM53-207ENST00000468117 ATF7IPQ6VMQ6 1270 aa26.36■■□□□ 1.81
TMEM53-207ENST00000468117 PLCH1Q4KWH8 1693 aa26.36■■□□□ 1.81
TMEM53-207ENST00000468117 USP35Q9P2H5 1018 aa26.36■■□□□ 1.81
TMEM53-207ENST00000468117 CYP27B1O15528 508 aa26.35■■□□□ 1.81
TMEM53-207ENST00000468117 FTSJ3Q8IY81 847 aaKnown RBP26.35■■□□□ 1.81
TMEM53-207ENST00000468117 DZIP1LQ8IYY4 767 aaKnown RBP26.35■■□□□ 1.81
TMEM53-207ENST00000468117 IFNL2Q8IZJ0 200 aa26.35■■□□□ 1.81
TMEM53-207ENST00000468117 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
TMEM53-207ENST00000468117 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
TMEM53-207ENST00000468117 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
TMEM53-207ENST00000468117 IPO8O15397 1037 aaKnown RBP26.34■■□□□ 1.81
TMEM53-207ENST00000468117 KDM6AO15550 1401 aaPredicted RBP26.34■■□□□ 1.81
TMEM53-207ENST00000468117 IL2RBP14784 551 aa26.33■■□□□ 1.81
TMEM53-207ENST00000468117 BTBD11A6QL63 1104 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms