RNA–Protein interactions for RNA: ENST00000468080.1

GPM6B-206, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-206ENST00000468080 LTN1O94822 1766 aa17.85■□□□□ 0.45
GPM6B-206ENST00000468080 ANKRD36BQ8N2N9 1353 aa17.85■□□□□ 0.45
GPM6B-206ENST00000468080 WWC3Q9ULE0 1092 aa17.85■□□□□ 0.45
GPM6B-206ENST00000468080 DNAJC5GQ8N7S2 189 aa17.84■□□□□ 0.45
GPM6B-206ENST00000468080 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
GPM6B-206ENST00000468080 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
GPM6B-206ENST00000468080 APLP1P51693 650 aa17.8■□□□□ 0.44
GPM6B-206ENST00000468080 MON2Q7Z3U7 1717 aa17.8■□□□□ 0.44
GPM6B-206ENST00000468080 USP54Q70EL1 1684 aa17.79■□□□□ 0.44
GPM6B-206ENST00000468080 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
GPM6B-206ENST00000468080 IGSF1Q8N6C5 1336 aa17.78■□□□□ 0.44
GPM6B-206ENST00000468080 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
GPM6B-206ENST00000468080 IP6K1Q92551 441 aa17.78■□□□□ 0.44
GPM6B-206ENST00000468080 USP47Q96K76 1375 aa17.77■□□□□ 0.43
GPM6B-206ENST00000468080 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
GPM6B-206ENST00000468080 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
GPM6B-206ENST00000468080 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
GPM6B-206ENST00000468080 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
GPM6B-206ENST00000468080 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
GPM6B-206ENST00000468080 CAPN15O75808 1086 aa17.74■□□□□ 0.43
GPM6B-206ENST00000468080 L3MBTL2Q969R5 705 aa17.74■□□□□ 0.43
GPM6B-206ENST00000468080 TOMM70O94826 608 aa17.73■□□□□ 0.43
GPM6B-206ENST00000468080 C5P01031 1676 aa17.73■□□□□ 0.43
GPM6B-206ENST00000468080 FBLN1P23142 703 aa17.72■□□□□ 0.43
GPM6B-206ENST00000468080 TMC1Q8TDI8 760 aa17.72■□□□□ 0.43
GPM6B-206ENST00000468080 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
GPM6B-206ENST00000468080 MEGF6O75095 1541 aa17.72■□□□□ 0.43
GPM6B-206ENST00000468080 RGPD2P0DJD1 1756 aa17.71■□□□□ 0.43
GPM6B-206ENST00000468080 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.43
GPM6B-206ENST00000468080 HTRA3P83110 453 aa17.71■□□□□ 0.43
GPM6B-206ENST00000468080 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
GPM6B-206ENST00000468080 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
GPM6B-206ENST00000468080 PHF14O94880 888 aa17.69■□□□□ 0.42
GPM6B-206ENST00000468080 HOXC9P31274 260 aa17.69■□□□□ 0.42
GPM6B-206ENST00000468080 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
GPM6B-206ENST00000468080 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
GPM6B-206ENST00000468080 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
GPM6B-206ENST00000468080 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
GPM6B-206ENST00000468080 EDC4Q6P2E9 1401 aaKnown RBP17.67■□□□□ 0.42
GPM6B-206ENST00000468080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.67■□□□□ 0.42
GPM6B-206ENST00000468080 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
GPM6B-206ENST00000468080 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
GPM6B-206ENST00000468080 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
GPM6B-206ENST00000468080 AK7Q96M32 723 aa17.67■□□□□ 0.42
GPM6B-206ENST00000468080 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
GPM6B-206ENST00000468080 AMPHP49418 695 aa17.66■□□□□ 0.42
GPM6B-206ENST00000468080 KLRG1Q96E93 195 aa17.66■□□□□ 0.42
GPM6B-206ENST00000468080 C4BP0C0L5 1744 aa17.66■□□□□ 0.42
GPM6B-206ENST00000468080 TOGARAM1Q9Y4F4 1720 aa17.66■□□□□ 0.42
GPM6B-206ENST00000468080 JMYQ8N9B5 988 aa17.65■□□□□ 0.42
GPM6B-206ENST00000468080 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
GPM6B-206ENST00000468080 WDR90Q96KV7 1748 aa17.64■□□□□ 0.41
GPM6B-206ENST00000468080 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
GPM6B-206ENST00000468080 UBR3Q6ZT12 1888 aa17.64■□□□□ 0.41
GPM6B-206ENST00000468080 A0A1W2PP64 1363 aa17.64■□□□□ 0.41
GPM6B-206ENST00000468080 HMGB2P26583 209 aaKnown RBP17.63■□□□□ 0.41
GPM6B-206ENST00000468080 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
GPM6B-206ENST00000468080 TERF2IPQ9NYB0 399 aa17.63■□□□□ 0.41
GPM6B-206ENST00000468080 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
GPM6B-206ENST00000468080 PRELPP51888 382 aa17.62■□□□□ 0.41
GPM6B-206ENST00000468080 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
GPM6B-206ENST00000468080 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
GPM6B-206ENST00000468080 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
GPM6B-206ENST00000468080 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
GPM6B-206ENST00000468080 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
GPM6B-206ENST00000468080 TATP17735 454 aaPredicted RBP17.6■□□□□ 0.41
GPM6B-206ENST00000468080 SSFA2P28290 1259 aa17.6■□□□□ 0.41
GPM6B-206ENST00000468080 LINC00116Q8NCU8 138 aa17.6■□□□□ 0.41
GPM6B-206ENST00000468080 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
GPM6B-206ENST00000468080 COG3Q96JB2 828 aa17.6■□□□□ 0.41
GPM6B-206ENST00000468080 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
GPM6B-206ENST00000468080 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
GPM6B-206ENST00000468080 CYP27B1O15528 508 aa17.59■□□□□ 0.41
GPM6B-206ENST00000468080 MMP10P09238 476 aa17.59■□□□□ 0.41
GPM6B-206ENST00000468080 PIGBQ92521 554 aa17.59■□□□□ 0.41
GPM6B-206ENST00000468080 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
GPM6B-206ENST00000468080 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
GPM6B-206ENST00000468080 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
GPM6B-206ENST00000468080 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
GPM6B-206ENST00000468080 ITGB4P16144 1822 aa17.58■□□□□ 0.4
GPM6B-206ENST00000468080 TGFB2P61812 414 aa17.57■□□□□ 0.4
GPM6B-206ENST00000468080 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
GPM6B-206ENST00000468080 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 GNPATO15228 680 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 SIK1P57059 783 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 FSTL1Q12841 308 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
GPM6B-206ENST00000468080 FCHSD2O94868 740 aa17.55■□□□□ 0.4
GPM6B-206ENST00000468080 DPEP1P16444 411 aa17.55■□□□□ 0.4
GPM6B-206ENST00000468080 ITPK1Q13572 414 aa17.55■□□□□ 0.4
GPM6B-206ENST00000468080 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
GPM6B-206ENST00000468080 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
GPM6B-206ENST00000468080 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
GPM6B-206ENST00000468080 HSP90AB2PQ58FF8 381 aa17.53■□□□□ 0.4
GPM6B-206ENST00000468080 CARD11Q9BXL7 1154 aa17.53■□□□□ 0.4
GPM6B-206ENST00000468080 RRAGCQ9HB90 399 aa17.53■□□□□ 0.4
GPM6B-206ENST00000468080 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
GPM6B-206ENST00000468080 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms